| Chain sequence(s) |
A: GGSVPCIETCVWTGCFLVPGCSCKSDKKCYLN
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:35)
[INFO] Main: Simulation completed successfully. (00:00:36)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.6703 | |
| 2 | G | A | -0.3923 | |
| 3 | S | A | 0.0614 | |
| 4 | V | A | 1.7135 | |
| 5 | P | A | 0.8319 | |
| 6 | C | A | 1.8753 | |
| 7 | I | A | 2.4706 | |
| 8 | E | A | 0.0000 | |
| 9 | T | A | 0.4319 | |
| 10 | C | A | 0.0000 | |
| 11 | V | A | 1.5317 | |
| 12 | W | A | 1.8187 | |
| 13 | T | A | 1.2844 | |
| 14 | G | A | 0.7562 | |
| 15 | C | A | 1.6045 | |
| 16 | F | A | 2.5342 | |
| 17 | L | A | 2.7196 | |
| 18 | V | A | 1.9700 | |
| 19 | P | A | 0.6527 | |
| 20 | G | A | -0.1075 | |
| 21 | C | A | 0.0000 | |
| 22 | S | A | -0.5455 | |
| 23 | C | A | -0.9103 | |
| 24 | K | A | -2.1756 | |
| 25 | S | A | -2.0522 | |
| 26 | D | A | -2.7237 | |
| 27 | K | A | -2.1061 | |
| 28 | K | A | -1.7619 | |
| 29 | C | A | 0.0000 | |
| 30 | Y | A | 0.0341 | |
| 31 | L | A | 0.5639 | |
| 32 | N | A | -0.8624 |