| Chain sequence(s) |
A: YPQSIDWRAKGAVTPVKNQGACGSCWAFSTIATVEGINKIVTGNLLELSEQELVDCDKHSYGCKGGYQTTSLQYVANNGVHTSKVYPYQAKQYKCRATDKPGPKVKITGYKRVPSNCETSFLGALANQPLSVLVEAGGKPFQLYKSGVFDGPCGTKLDHAVTAVGYGTSDGKNYIIIKNSWGPNWGEKGYMRLKRQSGNSQGTCGVYKSSYYPFKGFA
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Mutated residues | FA217A,FA214A,VA41A |
| Energy difference between WT (input) and mutated protein (by FoldX) | 3.86702 kcal/mol
CAUTION: Your mutation/s can destabilize the protein structure |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] FoldX: Building mutant model (00:00:57)
[INFO] FoldX: Starting FoldX energy minimalization (00:02:14)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:05)
[INFO] Main: Simulation completed successfully. (00:03:06)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 0.7162 | |
| 2 | P | A | -0.1688 | |
| 3 | Q | A | -1.1043 | |
| 4 | S | A | -0.6831 | |
| 5 | I | A | 0.0000 | |
| 6 | D | A | -1.0076 | |
| 7 | W | A | -1.1608 | |
| 8 | R | A | -1.4618 | |
| 9 | A | A | -1.2966 | |
| 10 | K | A | -1.9720 | |
| 11 | G | A | -1.3051 | |
| 12 | A | A | 0.0000 | |
| 13 | V | A | -0.5436 | |
| 14 | T | A | 0.0000 | |
| 15 | P | A | -0.6645 | |
| 16 | V | A | -0.7926 | |
| 17 | K | A | -0.9324 | |
| 18 | N | A | -1.5504 | |
| 19 | Q | A | 0.0000 | |
| 20 | G | A | -1.0901 | |
| 21 | A | A | -0.5661 | |
| 22 | C | A | 0.0000 | |
| 23 | G | A | -0.8467 | |
| 24 | S | A | 0.0000 | |
| 25 | C | A | -0.4301 | |
| 26 | W | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | F | A | 0.0000 | |
| 29 | S | A | 0.0000 | |
| 30 | T | A | 0.0000 | |
| 31 | I | A | 0.0000 | |
| 32 | A | A | -0.1617 | |
| 33 | T | A | 0.0000 | |
| 34 | V | A | 0.0000 | |
| 35 | E | A | 0.0000 | |
| 36 | G | A | 0.0000 | |
| 37 | I | A | 0.0000 | |
| 38 | N | A | 0.0000 | |
| 39 | K | A | -0.5471 | |
| 40 | I | A | 0.0271 | |
| 41 | A | A | -0.0329 | mutated: VA41A |
| 42 | T | A | -0.4808 | |
| 43 | G | A | -0.8361 | |
| 44 | N | A | -1.3045 | |
| 45 | L | A | -0.3436 | |
| 46 | L | A | -0.6617 | |
| 47 | E | A | -1.3585 | |
| 48 | L | A | 0.0000 | |
| 49 | S | A | 0.0000 | |
| 50 | E | A | 0.0000 | |
| 51 | Q | A | 0.0000 | |
| 52 | E | A | 0.0000 | |
| 53 | L | A | 0.0000 | |
| 54 | V | A | 0.0000 | |
| 55 | D | A | 0.0000 | |
| 56 | C | A | 0.0000 | |
| 57 | D | A | 0.0000 | |
| 58 | K | A | -1.9602 | |
| 59 | H | A | -1.4976 | |
| 60 | S | A | 0.0000 | |
| 61 | Y | A | -0.2352 | |
| 62 | G | A | 0.0000 | |
| 63 | C | A | -1.1416 | |
| 64 | K | A | -1.6511 | |
| 65 | G | A | -0.7417 | |
| 66 | G | A | -0.2665 | |
| 67 | Y | A | 0.5220 | |
| 68 | Q | A | 0.0000 | |
| 69 | T | A | -0.3721 | |
| 70 | T | A | -0.4940 | |
| 71 | S | A | 0.0000 | |
| 72 | L | A | 0.0000 | |
| 73 | Q | A | -0.8857 | |
| 74 | Y | A | -1.3006 | |
| 75 | V | A | 0.0000 | |
| 76 | A | A | 0.0000 | |
| 77 | N | A | -2.0047 | |
| 78 | N | A | -1.9631 | |
| 79 | G | A | 0.0000 | |
| 80 | V | A | 0.0000 | |
| 81 | H | A | 0.0000 | |
| 82 | T | A | 0.0000 | |
| 83 | S | A | -1.0786 | |
| 84 | K | A | -1.8385 | |
| 85 | V | A | -0.8765 | |
| 86 | Y | A | 0.0000 | |
| 87 | P | A | -0.6822 | |
| 88 | Y | A | -0.8601 | |
| 89 | Q | A | -1.2011 | |
| 90 | A | A | -1.3942 | |
| 91 | K | A | -2.2172 | |
| 92 | Q | A | -1.6083 | |
| 93 | Y | A | -1.0928 | |
| 94 | K | A | -1.5687 | |
| 95 | C | A | -1.1898 | |
| 96 | R | A | -1.3491 | |
| 97 | A | A | -1.3385 | |
| 98 | T | A | -1.2315 | |
| 99 | D | A | -2.2084 | |
| 100 | K | A | -1.8565 | |
| 101 | P | A | -1.3754 | |
| 102 | G | A | -1.3615 | |
| 103 | P | A | -1.5622 | |
| 104 | K | A | -2.5015 | |
| 105 | V | A | 0.0000 | |
| 106 | K | A | -2.3093 | |
| 107 | I | A | 0.0000 | |
| 108 | T | A | -0.8246 | |
| 109 | G | A | -0.9098 | |
| 110 | Y | A | -0.9343 | |
| 111 | K | A | -2.1683 | |
| 112 | R | A | -2.0952 | |
| 113 | V | A | 0.0000 | |
| 114 | P | A | -0.9796 | |
| 115 | S | A | -1.0900 | |
| 116 | N | A | -1.4964 | |
| 117 | C | A | -1.1531 | |
| 118 | E | A | -0.9772 | |
| 119 | T | A | -0.3535 | |
| 120 | S | A | -0.4331 | |
| 121 | F | A | 0.0000 | |
| 122 | L | A | 0.0000 | |
| 123 | G | A | -0.1241 | |
| 124 | A | A | -0.4595 | |
| 125 | L | A | 0.0000 | |
| 126 | A | A | -0.5053 | |
| 127 | N | A | -0.9683 | |
| 128 | Q | A | 0.0000 | |
| 129 | P | A | 0.0000 | |
| 130 | L | A | 0.0000 | |
| 131 | S | A | 0.0000 | |
| 132 | V | A | 0.0000 | |
| 133 | L | A | -0.2365 | |
| 134 | V | A | 0.0000 | |
| 135 | E | A | 0.0000 | |
| 136 | A | A | 0.0000 | |
| 137 | G | A | -1.6510 | |
| 138 | G | A | -1.3887 | |
| 139 | K | A | -1.7566 | |
| 140 | P | A | -1.1702 | |
| 141 | F | A | 0.0000 | |
| 142 | Q | A | -0.8707 | |
| 143 | L | A | 0.1256 | |
| 144 | Y | A | 0.0000 | |
| 145 | K | A | -2.0546 | |
| 146 | S | A | -1.3180 | |
| 147 | G | A | -1.0394 | |
| 148 | V | A | -1.1473 | |
| 149 | F | A | 0.0000 | |
| 150 | D | A | -2.0269 | |
| 151 | G | A | -1.3470 | |
| 152 | P | A | -1.0061 | |
| 153 | C | A | -1.0254 | |
| 154 | G | A | -0.8502 | |
| 155 | T | A | -1.2492 | |
| 156 | K | A | -2.0534 | |
| 157 | L | A | -1.3633 | |
| 158 | D | A | -2.0613 | |
| 159 | H | A | 0.0000 | |
| 160 | A | A | 0.0000 | |
| 161 | V | A | 0.0000 | |
| 162 | T | A | 0.0000 | |
| 163 | A | A | 0.0000 | |
| 164 | V | A | 0.0000 | |
| 165 | G | A | 0.0000 | |
| 166 | Y | A | 0.0000 | |
| 167 | G | A | 0.0000 | |
| 168 | T | A | -1.3097 | |
| 169 | S | A | -1.5011 | |
| 170 | D | A | -2.3723 | |
| 171 | G | A | -1.8686 | |
| 172 | K | A | -1.9419 | |
| 173 | N | A | -1.6270 | |
| 174 | Y | A | -0.9046 | |
| 175 | I | A | 0.0000 | |
| 176 | I | A | 0.0000 | |
| 177 | I | A | 0.0000 | |
| 178 | K | A | 0.0000 | |
| 179 | N | A | 0.0000 | |
| 180 | S | A | 0.0000 | |
| 181 | W | A | -0.9292 | |
| 182 | G | A | 0.0000 | |
| 183 | P | A | -1.7563 | |
| 184 | N | A | -2.2444 | |
| 185 | W | A | 0.0000 | |
| 186 | G | A | -1.8071 | |
| 187 | E | A | -2.1028 | |
| 188 | K | A | -2.5785 | |
| 189 | G | A | 0.0000 | |
| 190 | Y | A | 0.0000 | |
| 191 | M | A | 0.0000 | |
| 192 | R | A | -0.7457 | |
| 193 | L | A | 0.0000 | |
| 194 | K | A | -1.3830 | |
| 195 | R | A | 0.0000 | |
| 196 | Q | A | -1.5368 | |
| 197 | S | A | -1.1432 | |
| 198 | G | A | -1.2315 | |
| 199 | N | A | -1.8278 | |
| 200 | S | A | -1.5428 | |
| 201 | Q | A | -1.6889 | |
| 202 | G | A | 0.0000 | |
| 203 | T | A | 0.0000 | |
| 204 | C | A | 0.0000 | |
| 205 | G | A | 0.0000 | |
| 206 | V | A | 0.0000 | |
| 207 | Y | A | 0.0000 | |
| 208 | K | A | -0.7664 | |
| 209 | S | A | -0.5246 | |
| 210 | S | A | 0.0000 | |
| 211 | Y | A | -0.8330 | |
| 212 | Y | A | -0.6797 | |
| 213 | P | A | 0.0000 | |
| 214 | A | A | -0.5480 | mutated: FA214A |
| 215 | K | A | -0.5583 | |
| 216 | G | A | -0.7053 | |
| 217 | A | A | -0.4009 | mutated: FA217A |
| 218 | A | A | -0.2443 |