| Chain sequence(s) |
A: LPAPKNLVVSEVTEDSLRLSWADPHGFYDSFLIQYQESEKVGEAINLTVPGSERSYDLTGLKPGTEYTVSIYGVHNVYKDTNMRGLPLSAEFTT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:57)
[INFO] Main: Simulation completed successfully. (00:00:58)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | L | A | 0.7477 | |
| 2 | P | A | 0.1620 | |
| 3 | A | A | -0.0201 | |
| 4 | P | A | 0.0000 | |
| 5 | K | A | -1.8881 | |
| 6 | N | A | -1.4892 | |
| 7 | L | A | -0.1836 | |
| 8 | V | A | 0.8428 | |
| 9 | V | A | 0.0252 | |
| 10 | S | A | -0.6646 | |
| 11 | E | A | -1.9833 | |
| 12 | V | A | -0.9327 | |
| 13 | T | A | -1.7720 | |
| 14 | E | A | -3.0463 | |
| 15 | D | A | -2.8679 | |
| 16 | S | A | -2.1541 | |
| 17 | L | A | 0.0000 | |
| 18 | R | A | -1.4876 | |
| 19 | L | A | 0.0000 | |
| 20 | S | A | -0.5435 | |
| 21 | W | A | 0.0000 | |
| 22 | A | A | -1.3057 | |
| 23 | D | A | 0.0000 | |
| 24 | P | A | -1.0717 | |
| 25 | H | A | -0.9343 | |
| 26 | G | A | -0.7504 | |
| 27 | F | A | 0.1212 | |
| 28 | Y | A | 0.0000 | |
| 29 | D | A | -2.1896 | |
| 30 | S | A | -1.5916 | |
| 31 | F | A | 0.0000 | |
| 32 | L | A | -0.3147 | |
| 33 | I | A | 0.0000 | |
| 34 | Q | A | -0.5001 | |
| 35 | Y | A | -0.6184 | |
| 36 | Q | A | -1.5050 | |
| 37 | E | A | -2.1862 | |
| 38 | S | A | -2.1070 | |
| 39 | E | A | -2.5822 | |
| 40 | K | A | -1.9701 | |
| 41 | V | A | -0.0325 | |
| 42 | G | A | -0.9491 | |
| 43 | E | A | -2.0927 | |
| 44 | A | A | -0.9548 | |
| 45 | I | A | -0.4088 | |
| 46 | N | A | -0.9825 | |
| 47 | L | A | -0.0966 | |
| 48 | T | A | -0.1939 | |
| 49 | V | A | 0.0000 | |
| 50 | P | A | -1.1621 | |
| 51 | G | A | -1.3274 | |
| 52 | S | A | -1.3812 | |
| 53 | E | A | -1.6569 | |
| 54 | R | A | -1.1629 | |
| 55 | S | A | -0.8570 | |
| 56 | Y | A | -0.9123 | |
| 57 | D | A | -1.7825 | |
| 58 | L | A | 0.0000 | |
| 59 | T | A | -1.4507 | |
| 60 | G | A | -1.5360 | |
| 61 | L | A | 0.0000 | |
| 62 | K | A | -3.0188 | |
| 63 | P | A | -2.5526 | |
| 64 | G | A | -1.8596 | |
| 65 | T | A | -2.2321 | |
| 66 | E | A | -2.7107 | |
| 67 | Y | A | 0.0000 | |
| 68 | T | A | -1.4590 | |
| 69 | V | A | 0.0000 | |
| 70 | S | A | 0.0000 | |
| 71 | I | A | 0.0000 | |
| 72 | Y | A | 0.0000 | |
| 73 | G | A | 0.0000 | |
| 74 | V | A | -1.0773 | |
| 75 | H | A | -1.3342 | |
| 76 | N | A | -2.3456 | |
| 77 | V | A | -1.1472 | |
| 78 | Y | A | -0.4126 | |
| 79 | K | A | -2.2807 | |
| 80 | D | A | -2.6644 | |
| 81 | T | A | -1.8829 | |
| 82 | N | A | -2.4909 | |
| 83 | M | A | -1.3546 | |
| 84 | R | A | -1.4659 | |
| 85 | G | A | 0.0000 | |
| 86 | L | A | 1.2502 | |
| 87 | P | A | 0.3883 | |
| 88 | L | A | 0.0551 | |
| 89 | S | A | -0.2415 | |
| 90 | A | A | -0.5744 | |
| 91 | E | A | -2.1500 | |
| 92 | F | A | 0.0000 | |
| 93 | T | A | -1.6368 | |
| 94 | T | A | -1.9364 |