Project name: query_structure

Status: done

Started: 2026-03-16 20:28:01
Settings
Chain sequence(s) A: LPAPKNLVVSEVTEDSLRLSWADPHGFYDSFLIQYQESEKVGEAINLTVPGSERSYDLTGLKPGTEYTVSIYGVHNVYKDTNMRGLPLSAEFTT
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:57)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:58)
Show buried residues

Minimal score value
-3.0463
Maximal score value
1.2502
Average score
-0.9876
Total score value
-92.8356

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 L A 0.7477
2 P A 0.1620
3 A A -0.0201
4 P A 0.0000
5 K A -1.8881
6 N A -1.4892
7 L A -0.1836
8 V A 0.8428
9 V A 0.0252
10 S A -0.6646
11 E A -1.9833
12 V A -0.9327
13 T A -1.7720
14 E A -3.0463
15 D A -2.8679
16 S A -2.1541
17 L A 0.0000
18 R A -1.4876
19 L A 0.0000
20 S A -0.5435
21 W A 0.0000
22 A A -1.3057
23 D A 0.0000
24 P A -1.0717
25 H A -0.9343
26 G A -0.7504
27 F A 0.1212
28 Y A 0.0000
29 D A -2.1896
30 S A -1.5916
31 F A 0.0000
32 L A -0.3147
33 I A 0.0000
34 Q A -0.5001
35 Y A -0.6184
36 Q A -1.5050
37 E A -2.1862
38 S A -2.1070
39 E A -2.5822
40 K A -1.9701
41 V A -0.0325
42 G A -0.9491
43 E A -2.0927
44 A A -0.9548
45 I A -0.4088
46 N A -0.9825
47 L A -0.0966
48 T A -0.1939
49 V A 0.0000
50 P A -1.1621
51 G A -1.3274
52 S A -1.3812
53 E A -1.6569
54 R A -1.1629
55 S A -0.8570
56 Y A -0.9123
57 D A -1.7825
58 L A 0.0000
59 T A -1.4507
60 G A -1.5360
61 L A 0.0000
62 K A -3.0188
63 P A -2.5526
64 G A -1.8596
65 T A -2.2321
66 E A -2.7107
67 Y A 0.0000
68 T A -1.4590
69 V A 0.0000
70 S A 0.0000
71 I A 0.0000
72 Y A 0.0000
73 G A 0.0000
74 V A -1.0773
75 H A -1.3342
76 N A -2.3456
77 V A -1.1472
78 Y A -0.4126
79 K A -2.2807
80 D A -2.6644
81 T A -1.8829
82 N A -2.4909
83 M A -1.3546
84 R A -1.4659
85 G A 0.0000
86 L A 1.2502
87 P A 0.3883
88 L A 0.0551
89 S A -0.2415
90 A A -0.5744
91 E A -2.1500
92 F A 0.0000
93 T A -1.6368
94 T A -1.9364
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Laboratory of Theory of Biopolymers 2018