| Chain sequence(s) |
A: GSKGHFF
B: GSKGHFF input PDB |
| Selected Chain(s) | A,B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:19)
[INFO] Main: Simulation completed successfully. (00:00:19)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -1.4546 | |
| 2 | S | A | -2.2116 | |
| 3 | K | A | -3.0036 | |
| 4 | G | A | -1.8419 | |
| 5 | H | A | -0.1531 | |
| 6 | F | A | 2.6678 | |
| 7 | F | A | 3.3848 | |
| 1 | G | B | -1.5773 | |
| 2 | S | B | -2.0999 | |
| 3 | K | B | -3.0829 | |
| 4 | G | B | -1.5738 | |
| 5 | H | B | -0.4292 | |
| 6 | F | B | 1.9470 | |
| 7 | F | B | 3.1761 |