| Chain sequence(s) |
H: EVQLQQSGPELVKPGASVKISCKASGYTFTDYYMNWVKQSHGKSLEWIGDIYPKNGGTRYNQKFKGKATLTVDKSSSTAYMDLRSLTSEDSAVYYCAKTGDWTVGNFNVWGTGTTVTVSS
L: QIVLTQSPAIMSASPGEKVTISCSASSSVSYMYWYQQKPGSSPKPWIFRTSNLASGVPARFSGSGSGTSYSLTISSMEAEDAATYYCQQFHSYPRTFGGGTKLEIK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:36)
[INFO] Main: Simulation completed successfully. (00:01:37)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -1.9692 | |
| 2 | V | H | -1.0383 | |
| 3 | Q | H | -1.9727 | |
| 4 | L | H | 0.0000 | |
| 5 | Q | H | -2.0506 | |
| 6 | Q | H | 0.0000 | |
| 7 | S | H | -1.0473 | |
| 8 | G | H | -0.7562 | |
| 9 | P | H | -0.3635 | |
| 11 | E | H | -0.4145 | |
| 12 | L | H | 0.8489 | |
| 13 | V | H | -0.2682 | |
| 14 | K | H | -1.7541 | |
| 15 | P | H | -1.5164 | |
| 16 | G | H | -1.2933 | |
| 17 | A | H | -1.0530 | |
| 18 | S | H | -1.2139 | |
| 19 | V | H | 0.0000 | |
| 20 | K | H | -1.7940 | |
| 21 | I | H | 0.0000 | |
| 22 | S | H | -0.8071 | |
| 23 | C | H | 0.0000 | |
| 24 | K | H | -1.8943 | |
| 25 | A | H | 0.0000 | |
| 26 | S | H | -1.3443 | |
| 27 | G | H | -1.0698 | |
| 28 | Y | H | -0.4845 | |
| 29 | T | H | -0.2382 | |
| 30 | F | H | 0.0000 | |
| 35 | T | H | -1.3745 | |
| 36 | D | H | -0.8357 | |
| 37 | Y | H | 0.1026 | |
| 38 | Y | H | 0.3235 | |
| 39 | M | H | 0.0000 | |
| 40 | N | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | K | H | 0.0000 | |
| 44 | Q | H | -1.0175 | |
| 45 | S | H | -1.5114 | |
| 46 | H | H | -1.8957 | |
| 47 | G | H | -1.8265 | |
| 48 | K | H | -2.4701 | |
| 49 | S | H | -1.4718 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -1.1560 | |
| 52 | W | H | 0.0000 | |
| 53 | I | H | 0.0000 | |
| 54 | G | H | 0.0000 | |
| 55 | D | H | 0.0000 | |
| 56 | I | H | 0.0000 | |
| 57 | Y | H | -0.8350 | |
| 58 | P | H | 0.0000 | |
| 59 | K | H | -2.6283 | |
| 62 | N | H | -2.3460 | |
| 63 | G | H | -1.6957 | |
| 64 | G | H | -1.3589 | |
| 65 | T | H | -1.1150 | |
| 66 | R | H | -2.1129 | |
| 67 | Y | H | -1.6932 | |
| 68 | N | H | -1.9593 | |
| 69 | Q | H | -2.7208 | |
| 70 | K | H | -2.4896 | |
| 71 | F | H | 0.0000 | |
| 72 | K | H | -2.9371 | |
| 74 | G | H | -1.8810 | |
| 75 | K | H | -1.6581 | |
| 76 | A | H | 0.0000 | |
| 77 | T | H | -0.8852 | |
| 78 | L | H | 0.0000 | |
| 79 | T | H | -0.3004 | |
| 80 | V | H | -0.9048 | |
| 81 | D | H | -1.3480 | |
| 82 | K | H | -2.2441 | |
| 83 | S | H | -1.0966 | |
| 84 | S | H | -0.9863 | |
| 85 | S | H | -1.1488 | |
| 86 | T | H | 0.0000 | |
| 87 | A | H | 0.0000 | |
| 88 | Y | H | -0.2097 | |
| 89 | M | H | 0.0000 | |
| 90 | D | H | 0.0000 | |
| 91 | L | H | 0.0000 | |
| 92 | R | H | -1.3460 | |
| 93 | S | H | -1.1517 | |
| 94 | L | H | 0.0000 | |
| 95 | T | H | -1.1795 | |
| 96 | S | H | -1.2359 | |
| 97 | E | H | -1.6638 | |
| 98 | D | H | 0.0000 | |
| 99 | S | H | -0.5941 | |
| 100 | A | H | 0.0000 | |
| 101 | V | H | -0.0089 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | K | H | 0.0000 | |
| 107 | T | H | 0.0000 | |
| 108 | G | H | -0.1855 | |
| 109 | D | H | -0.0485 | |
| 110 | W | H | 0.9523 | |
| 111 | T | H | 0.5187 | |
| 112 | V | H | 0.2707 | |
| 113 | G | H | 0.0000 | |
| 114 | N | H | -0.2336 | |
| 115 | F | H | 0.0000 | |
| 116 | N | H | -0.7457 | |
| 117 | V | H | -0.4150 | |
| 118 | W | H | 0.0000 | |
| 119 | G | H | 0.0000 | |
| 120 | T | H | -0.6019 | |
| 121 | G | H | -0.3778 | |
| 122 | T | H | 0.0000 | |
| 123 | T | H | -0.1628 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | -0.1232 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.6223 | |
| 128 | S | H | -0.7423 | |
| 1 | Q | L | -0.8753 | |
| 2 | I | L | 0.0000 | |
| 3 | V | L | 1.2465 | |
| 4 | L | L | 0.0000 | |
| 5 | T | L | 0.0796 | |
| 6 | Q | L | 0.0000 | |
| 7 | S | L | -0.1082 | |
| 8 | P | L | 0.2319 | |
| 9 | A | L | 0.5654 | |
| 10 | I | L | 1.5549 | |
| 11 | M | L | 0.6405 | |
| 12 | S | L | -0.2553 | |
| 13 | A | L | 0.0000 | |
| 14 | S | L | -1.4476 | |
| 15 | P | L | -1.6663 | |
| 16 | G | L | -1.8125 | |
| 17 | E | L | -2.4228 | |
| 18 | K | L | -2.5827 | |
| 19 | V | L | 0.0000 | |
| 20 | T | L | -0.6273 | |
| 21 | I | L | 0.0000 | |
| 22 | S | L | -0.3456 | |
| 23 | C | L | 0.0000 | |
| 24 | S | L | -0.1921 | |
| 25 | A | L | 0.0000 | |
| 26 | S | L | 0.0428 | |
| 27 | S | L | -0.2545 | |
| 28 | S | L | -0.5728 | |
| 29 | V | L | 0.0000 | |
| 37 | S | L | -0.3023 | |
| 38 | Y | L | 0.2094 | |
| 39 | M | L | 0.0000 | |
| 40 | Y | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | Q | L | 0.0000 | |
| 44 | Q | L | 0.0000 | |
| 45 | K | L | -0.8571 | |
| 46 | P | L | -0.7342 | |
| 47 | G | L | -0.7352 | |
| 48 | S | L | -0.6495 | |
| 49 | S | L | -0.4586 | |
| 50 | P | L | 0.0000 | |
| 51 | K | L | -1.0044 | |
| 52 | P | L | -0.5495 | |
| 53 | W | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | F | L | -0.1156 | |
| 56 | R | L | -0.5166 | |
| 57 | T | L | 0.0000 | |
| 65 | S | L | -0.6042 | |
| 66 | N | L | -0.7795 | |
| 67 | L | L | -0.0421 | |
| 68 | A | L | -0.2604 | |
| 69 | S | L | -0.4323 | |
| 70 | G | L | -0.4166 | |
| 71 | V | L | -0.0494 | |
| 72 | P | L | -0.2387 | |
| 74 | A | L | -0.0875 | |
| 75 | R | L | -0.7031 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -0.3735 | |
| 78 | G | L | -0.4752 | |
| 79 | S | L | -0.6264 | |
| 80 | G | L | -0.6043 | |
| 83 | S | L | -0.5125 | |
| 84 | G | L | -0.5057 | |
| 85 | T | L | -0.5036 | |
| 86 | S | L | -0.6443 | |
| 87 | Y | L | 0.0000 | |
| 88 | S | L | -0.3949 | |
| 89 | L | L | 0.0000 | |
| 90 | T | L | -0.5927 | |
| 91 | I | L | 0.0000 | |
| 92 | S | L | -1.3980 | |
| 93 | S | L | -1.7479 | |
| 94 | M | L | 0.0000 | |
| 95 | E | L | -1.9366 | |
| 96 | A | L | -1.1695 | |
| 97 | E | L | -1.4590 | |
| 98 | D | L | 0.0000 | |
| 99 | A | L | -0.8150 | |
| 100 | A | L | 0.0000 | |
| 101 | T | L | -0.4094 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | Q | L | 0.0000 | |
| 106 | Q | L | 0.0000 | |
| 107 | F | L | -0.1521 | |
| 108 | H | L | -0.7047 | |
| 109 | S | L | -0.5430 | |
| 114 | Y | L | -0.4660 | |
| 115 | P | L | -0.9961 | |
| 116 | R | L | -0.3076 | |
| 117 | T | L | 0.0000 | |
| 118 | F | L | 0.0000 | |
| 119 | G | L | 0.0000 | |
| 120 | G | L | -0.7496 | |
| 121 | G | L | 0.0000 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -0.3901 | |
| 124 | L | L | 0.0000 | |
| 125 | E | L | -0.2659 | |
| 126 | I | L | -0.4183 | |
| 127 | K | L | -1.4427 |