| Chain sequence(s) |
A: IKSLFAVIIGGSVGCTLRWLLSTKFNSLFPNLPPGTLVVNLLAGLIIGTMLAYFLRQPHLDPFWKLMITTGLCGGLSTFSTFSVEVFALLQAGNYIWALTSVLVHVIGSLIMTALGFFIITILF
C: SVSSVPTKLEVVAATPTSLLISWDAPAVTVVHYVITYGETGGNSPVQEFTVPGSKSTATISGLKPGVDYTITVYTMYYSYSDLYSYSSPISINYRT B: MIKSLFAVIIGGSVGCTLRWLLSTKFNSLFPNLPPGTLVVNLLAGLIIGTMLAYFLRQPHLDPFWKLMITTGLCGGLSTFSTFSVEVFALLQAGNYIWALTSVLVHVIGSLIMTALGFFIITILFA D: SVSSVPTKLEVVAATPTSLLISWDAPAVTVVHYVITYGETGGNSPVQEFTVPGSKSTATISGLKPGVDYTITVYTMYYSYSDLYSYSSPISINYRT input PDB |
| Selected Chain(s) | A,C,B,D |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:58)
[INFO] Main: Simulation completed successfully. (00:03:01)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 2 | I | A | 1.6590 | |
| 3 | K | A | 0.2077 | |
| 4 | S | A | 1.0612 | |
| 5 | L | A | 1.8416 | |
| 6 | F | A | 2.4649 | |
| 7 | A | A | 0.0000 | |
| 8 | V | A | 0.0000 | |
| 9 | I | A | 2.3555 | |
| 10 | I | A | 2.3093 | |
| 11 | G | A | 0.0000 | |
| 12 | G | A | 0.0000 | |
| 13 | S | A | 2.0931 | |
| 14 | V | A | 2.3267 | |
| 15 | G | A | 0.0000 | |
| 16 | C | A | 0.0000 | |
| 17 | T | A | 1.4913 | |
| 18 | L | A | 1.4100 | |
| 19 | R | A | 0.0000 | |
| 20 | W | A | 0.6589 | |
| 21 | L | A | 0.6916 | |
| 22 | L | A | 0.6337 | |
| 23 | S | A | 0.0000 | |
| 24 | T | A | -0.1740 | |
| 25 | K | A | -0.8332 | |
| 26 | F | A | 0.9997 | |
| 27 | N | A | 0.0000 | |
| 28 | S | A | 1.0533 | |
| 29 | L | A | 2.0949 | |
| 30 | F | A | 1.7800 | |
| 31 | P | A | 0.8307 | |
| 32 | N | A | 0.4342 | |
| 33 | L | A | 0.0000 | |
| 34 | P | A | 0.0000 | |
| 35 | P | A | 0.8952 | |
| 36 | G | A | 0.0000 | |
| 37 | T | A | 0.0000 | |
| 38 | L | A | 1.0401 | |
| 39 | V | A | 1.5715 | |
| 40 | V | A | 0.0000 | |
| 41 | N | A | 0.0000 | |
| 42 | L | A | 1.6691 | |
| 43 | L | A | 1.2085 | |
| 44 | A | A | 0.0000 | |
| 45 | G | A | 0.0000 | |
| 46 | L | A | 1.3419 | |
| 47 | I | A | 0.8837 | |
| 48 | I | A | 0.0000 | |
| 49 | G | A | 0.0000 | |
| 50 | T | A | 1.1243 | |
| 51 | M | A | 0.4570 | |
| 52 | L | A | 0.0000 | |
| 53 | A | A | 0.0000 | |
| 54 | Y | A | 0.5008 | |
| 55 | F | A | 0.0000 | |
| 56 | L | A | 0.0000 | |
| 57 | R | A | -0.3539 | |
| 58 | Q | A | -0.9640 | |
| 59 | P | A | -0.9945 | |
| 60 | H | A | -1.2826 | |
| 61 | L | A | -0.3004 | |
| 62 | D | A | -0.3531 | |
| 63 | P | A | -0.1966 | |
| 64 | F | A | 1.0186 | |
| 65 | W | A | 1.4273 | |
| 66 | K | A | 0.5292 | |
| 67 | L | A | 0.9139 | |
| 68 | M | A | 1.8154 | |
| 69 | I | A | 1.3024 | |
| 70 | T | A | 0.0000 | |
| 71 | T | A | 0.0000 | |
| 72 | G | A | 0.0000 | |
| 73 | L | A | 1.2474 | |
| 74 | C | A | 0.0000 | |
| 75 | G | A | 0.0000 | |
| 76 | G | A | 0.0000 | |
| 77 | L | A | 0.0000 | |
| 78 | S | A | 0.0000 | |
| 79 | T | A | 0.0000 | |
| 80 | F | A | 0.0000 | |
| 81 | S | A | 0.0000 | |
| 82 | T | A | 0.0000 | |
| 83 | F | A | 0.0000 | |
| 84 | S | A | 0.0000 | |
| 85 | V | A | 0.0000 | |
| 86 | E | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | F | A | 0.0000 | |
| 89 | A | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | L | A | 1.1282 | |
| 92 | Q | A | -0.1133 | |
| 93 | A | A | 0.0000 | |
| 94 | G | A | -0.0247 | |
| 95 | N | A | 0.8468 | |
| 96 | Y | A | 2.4421 | |
| 97 | I | A | 2.9469 | |
| 98 | W | A | 1.9716 | |
| 99 | A | A | 0.0000 | |
| 100 | L | A | 2.2928 | |
| 101 | T | A | 1.7564 | |
| 102 | S | A | 0.0000 | |
| 103 | V | A | 1.6355 | |
| 104 | L | A | 2.0658 | |
| 105 | V | A | 2.0336 | |
| 106 | H | A | 0.0000 | |
| 107 | V | A | 0.0000 | |
| 108 | I | A | 2.7943 | |
| 109 | G | A | 2.1854 | |
| 110 | S | A | 0.0000 | |
| 111 | L | A | 1.9940 | |
| 112 | I | A | 2.7936 | |
| 113 | M | A | 2.1662 | |
| 114 | T | A | 0.0000 | |
| 115 | A | A | 1.8310 | |
| 116 | L | A | 2.6853 | |
| 117 | G | A | 0.0000 | |
| 118 | F | A | 0.0000 | |
| 119 | F | A | 3.5037 | |
| 120 | I | A | 3.7178 | |
| 121 | I | A | 3.2293 | |
| 122 | T | A | 3.3069 | |
| 123 | I | A | 4.3945 | |
| 124 | L | A | 4.1617 | |
| 125 | F | A | 3.6504 | |
| 1 | M | B | 1.4238 | |
| 2 | I | B | 1.4699 | |
| 3 | K | B | -0.0396 | |
| 4 | S | B | 0.9154 | |
| 5 | L | B | 1.7907 | |
| 6 | F | B | 2.3221 | |
| 7 | A | B | 0.0000 | |
| 8 | V | B | 0.0000 | |
| 9 | I | B | 2.5380 | |
| 10 | I | B | 2.6573 | |
| 11 | G | B | 0.0000 | |
| 12 | G | B | 0.0000 | |
| 13 | S | B | 2.2218 | |
| 14 | V | B | 2.3770 | |
| 15 | G | B | 0.0000 | |
| 16 | C | B | 0.0000 | |
| 17 | T | B | 1.6913 | |
| 18 | L | B | 1.6427 | |
| 19 | R | B | 0.0000 | |
| 20 | W | B | 1.0459 | |
| 21 | L | B | 1.4365 | |
| 22 | L | B | 1.0719 | |
| 23 | S | B | 0.0000 | |
| 24 | T | B | -0.0230 | |
| 25 | K | B | -0.4610 | |
| 26 | F | B | 1.4457 | |
| 27 | N | B | 0.0000 | |
| 28 | S | B | 1.1058 | |
| 29 | L | B | 2.1565 | |
| 30 | F | B | 1.7862 | |
| 31 | P | B | 0.8415 | |
| 32 | N | B | 0.4443 | |
| 33 | L | B | 0.0000 | |
| 34 | P | B | 0.0000 | |
| 35 | P | B | 0.9972 | |
| 36 | G | B | 0.0000 | |
| 37 | T | B | 0.0000 | |
| 38 | L | B | 0.9416 | |
| 39 | V | B | 1.6146 | |
| 40 | V | B | 0.0000 | |
| 41 | N | B | 0.0000 | |
| 42 | L | B | 1.6914 | |
| 43 | L | B | 1.3098 | |
| 44 | A | B | 0.0000 | |
| 45 | G | B | 0.0000 | |
| 46 | L | B | 1.5383 | |
| 47 | I | B | 1.0210 | |
| 48 | I | B | 0.0000 | |
| 49 | G | B | 0.0000 | |
| 50 | T | B | 1.0329 | |
| 51 | M | B | 0.2780 | |
| 52 | L | B | 0.0000 | |
| 53 | A | B | 0.0000 | |
| 54 | Y | B | 0.4517 | |
| 55 | F | B | 0.0000 | |
| 56 | L | B | -0.4337 | |
| 57 | R | B | -0.8119 | |
| 58 | Q | B | -1.2824 | |
| 59 | P | B | -1.2577 | |
| 60 | H | B | -1.6474 | |
| 61 | L | B | -1.1140 | |
| 62 | D | B | -1.4686 | |
| 63 | P | B | -0.7952 | |
| 64 | F | B | 0.1379 | |
| 65 | W | B | 0.6023 | |
| 66 | K | B | 0.0147 | |
| 67 | L | B | 0.5397 | |
| 68 | M | B | 1.6137 | |
| 69 | I | B | 1.2107 | |
| 70 | T | B | 0.0000 | |
| 71 | T | B | 0.0000 | |
| 72 | G | B | 0.0000 | |
| 73 | L | B | 1.3288 | |
| 74 | C | B | 0.0000 | |
| 75 | G | B | 0.0000 | |
| 76 | G | B | 0.0000 | |
| 77 | L | B | 0.0000 | |
| 78 | S | B | 0.0000 | |
| 79 | T | B | 0.0000 | |
| 80 | F | B | 0.0000 | |
| 81 | S | B | 0.0000 | |
| 82 | T | B | 0.0000 | |
| 83 | F | B | 0.0000 | |
| 84 | S | B | 0.0000 | |
| 85 | V | B | 0.0000 | |
| 86 | E | B | 0.0000 | |
| 87 | V | B | 0.0000 | |
| 88 | F | B | 0.0000 | |
| 89 | A | B | 0.0000 | |
| 90 | L | B | 0.0000 | |
| 91 | L | B | 1.2237 | |
| 92 | Q | B | -0.0586 | |
| 93 | A | B | -0.2991 | |
| 94 | G | B | 0.1870 | |
| 95 | N | B | 1.0347 | |
| 96 | Y | B | 2.5509 | |
| 97 | I | B | 2.9881 | |
| 98 | W | B | 2.0060 | |
| 99 | A | B | 0.0000 | |
| 100 | L | B | 2.3950 | |
| 101 | T | B | 1.7561 | |
| 102 | S | B | 0.0000 | |
| 103 | V | B | 1.4110 | |
| 104 | L | B | 2.0916 | |
| 105 | V | B | 1.9744 | |
| 106 | H | B | 0.0000 | |
| 107 | V | B | 0.0000 | |
| 108 | I | B | 2.6655 | |
| 109 | G | B | 2.0092 | |
| 110 | S | B | 0.0000 | |
| 111 | L | B | 1.8745 | |
| 112 | I | B | 2.4298 | |
| 113 | M | B | 2.0283 | |
| 114 | T | B | 0.0000 | |
| 115 | A | B | 1.5871 | |
| 116 | L | B | 2.1947 | |
| 117 | G | B | 0.0000 | |
| 118 | F | B | 0.0000 | |
| 119 | F | B | 2.7127 | |
| 120 | I | B | 3.1288 | |
| 121 | I | B | 0.0000 | |
| 122 | T | B | 2.7019 | |
| 123 | I | B | 4.0265 | |
| 124 | L | B | 3.9001 | |
| 125 | F | B | 3.4140 | |
| 126 | A | B | 1.9952 | |
| 1 | S | C | 0.1142 | |
| 2 | V | C | 0.7881 | |
| 3 | S | C | 0.2227 | |
| 4 | S | C | 0.4411 | |
| 5 | V | C | 0.4637 | |
| 6 | P | C | 0.0000 | |
| 7 | T | C | -1.5395 | |
| 8 | K | C | -2.5207 | |
| 9 | L | C | 0.0000 | |
| 10 | E | C | -1.4336 | |
| 11 | V | C | 0.4627 | |
| 12 | V | C | 1.7345 | |
| 13 | A | C | 1.0182 | |
| 14 | A | C | 0.3807 | |
| 15 | T | C | -0.1594 | |
| 16 | P | C | -1.0541 | |
| 17 | T | C | -0.9867 | |
| 18 | S | C | -0.4960 | |
| 19 | L | C | 0.0000 | |
| 20 | L | C | 0.9482 | |
| 21 | I | C | 0.0000 | |
| 22 | S | C | -0.7468 | |
| 23 | W | C | 0.0000 | |
| 24 | D | C | -2.5494 | |
| 25 | A | C | -1.2083 | |
| 26 | P | C | -0.1560 | |
| 27 | A | C | 0.3941 | |
| 28 | V | C | 0.6418 | |
| 29 | T | C | 0.0206 | |
| 30 | V | C | 0.0000 | |
| 31 | V | C | 0.0000 | |
| 32 | H | C | -0.5299 | |
| 33 | Y | C | 0.0000 | |
| 34 | V | C | 0.0000 | |
| 35 | I | C | 0.0000 | |
| 36 | T | C | -0.5320 | |
| 37 | Y | C | -0.3982 | |
| 38 | G | C | 0.0000 | |
| 39 | E | C | -1.8730 | |
| 40 | T | C | -1.4099 | |
| 41 | G | C | -1.4239 | |
| 42 | G | C | -1.4007 | |
| 43 | N | C | -1.6153 | |
| 44 | S | C | -1.0184 | |
| 45 | P | C | -0.5119 | |
| 46 | V | C | 0.2207 | |
| 47 | Q | C | -1.2047 | |
| 48 | E | C | -1.6699 | |
| 49 | F | C | -0.5196 | |
| 50 | T | C | -0.2224 | |
| 51 | V | C | 0.0000 | |
| 52 | P | C | -0.9455 | |
| 53 | G | C | -0.9856 | |
| 54 | S | C | -1.2548 | |
| 55 | K | C | -1.8633 | |
| 56 | S | C | -1.3361 | |
| 57 | T | C | -0.5986 | |
| 58 | A | C | 0.0000 | |
| 59 | T | C | 0.1300 | |
| 60 | I | C | 0.0000 | |
| 61 | S | C | -0.6485 | |
| 62 | G | C | -0.9987 | |
| 63 | L | C | 0.0000 | |
| 64 | K | C | -2.3654 | |
| 65 | P | C | -1.6271 | |
| 66 | G | C | -1.4519 | |
| 67 | V | C | -1.6309 | |
| 68 | D | C | -2.1963 | |
| 69 | Y | C | 0.0000 | |
| 70 | T | C | -0.7669 | |
| 71 | I | C | 0.0000 | |
| 72 | T | C | -0.2887 | |
| 73 | V | C | 0.0000 | |
| 74 | Y | C | 0.3826 | |
| 75 | T | C | 0.0000 | |
| 76 | M | C | 0.0000 | |
| 77 | Y | C | 0.2768 | |
| 78 | Y | C | 0.0000 | |
| 79 | S | C | -0.1878 | |
| 80 | Y | C | -0.2856 | |
| 81 | S | C | -0.5989 | |
| 82 | D | C | -1.0729 | |
| 83 | L | C | 0.0000 | |
| 84 | Y | C | 0.0000 | |
| 85 | S | C | -0.1428 | |
| 86 | Y | C | 0.7072 | |
| 87 | S | C | 0.4912 | |
| 88 | S | C | 0.0866 | |
| 89 | P | C | 0.0886 | |
| 90 | I | C | 0.0809 | |
| 91 | S | C | -0.5326 | |
| 92 | I | C | -0.5788 | |
| 93 | N | C | -1.7044 | |
| 94 | Y | C | -1.4289 | |
| 95 | R | C | -2.5751 | |
| 96 | T | C | -1.6836 | |
| 1 | S | D | -0.0959 | |
| 2 | V | D | 0.8668 | |
| 3 | S | D | 0.2308 | |
| 4 | S | D | 0.3927 | |
| 5 | V | D | 0.4332 | |
| 6 | P | D | 0.0000 | |
| 7 | T | D | -1.3006 | |
| 8 | K | D | -2.3776 | |
| 9 | L | D | 0.0000 | |
| 10 | E | D | -1.7738 | |
| 11 | V | D | 0.1570 | |
| 12 | V | D | 1.5562 | |
| 13 | A | D | 0.9154 | |
| 14 | A | D | 0.3859 | |
| 15 | T | D | -0.1761 | |
| 16 | P | D | -1.0576 | |
| 17 | T | D | -0.9553 | |
| 18 | S | D | -0.5239 | |
| 19 | L | D | 0.0000 | |
| 20 | L | D | 0.7942 | |
| 21 | I | D | 0.0000 | |
| 22 | S | D | -0.7123 | |
| 23 | W | D | 0.0000 | |
| 24 | D | D | -1.6713 | |
| 25 | A | D | -0.7299 | |
| 26 | P | D | 0.0000 | |
| 27 | A | D | 0.4715 | |
| 28 | V | D | 0.6477 | |
| 29 | T | D | 0.0083 | |
| 30 | V | D | 0.0000 | |
| 31 | V | D | 0.0000 | |
| 32 | H | D | -0.5206 | |
| 33 | Y | D | 0.0000 | |
| 34 | V | D | 0.0000 | |
| 35 | I | D | 0.0000 | |
| 36 | T | D | 0.0000 | |
| 37 | Y | D | -0.2622 | |
| 38 | G | D | 0.0000 | |
| 39 | E | D | -1.0818 | |
| 40 | T | D | -0.9948 | |
| 41 | G | D | -1.1568 | |
| 42 | G | D | -1.4180 | |
| 43 | N | D | -1.5196 | |
| 44 | S | D | -0.7160 | |
| 45 | P | D | -0.1364 | |
| 46 | V | D | 0.4658 | |
| 47 | Q | D | -1.0828 | |
| 48 | E | D | -1.6720 | |
| 49 | F | D | -0.5241 | |
| 50 | T | D | -0.2436 | |
| 51 | V | D | 0.0000 | |
| 52 | P | D | -0.9309 | |
| 53 | G | D | -0.9188 | |
| 54 | S | D | -1.0650 | |
| 55 | K | D | -1.4561 | |
| 56 | S | D | -0.9533 | |
| 57 | T | D | -0.4380 | |
| 58 | A | D | 0.0000 | |
| 59 | T | D | 0.0350 | |
| 60 | I | D | 0.0000 | |
| 61 | S | D | -0.6286 | |
| 62 | G | D | -1.0074 | |
| 63 | L | D | 0.0000 | |
| 64 | K | D | -2.2269 | |
| 65 | P | D | -1.6420 | |
| 66 | G | D | -1.3065 | |
| 67 | V | D | -1.2074 | |
| 68 | D | D | -1.8104 | |
| 69 | Y | D | 0.0000 | |
| 70 | T | D | -0.6156 | |
| 71 | I | D | 0.0000 | |
| 72 | T | D | -0.2922 | |
| 73 | V | D | 0.0000 | |
| 74 | Y | D | 0.3545 | |
| 75 | T | D | 0.0000 | |
| 76 | M | D | 0.0000 | |
| 77 | Y | D | 0.3082 | |
| 78 | Y | D | 0.0000 | |
| 79 | S | D | -0.1498 | |
| 80 | Y | D | -0.1095 | |
| 81 | S | D | -0.4352 | |
| 82 | D | D | -0.9861 | |
| 83 | L | D | 0.0000 | |
| 84 | Y | D | 0.0000 | |
| 85 | S | D | 0.0196 | |
| 86 | Y | D | 0.8325 | |
| 87 | S | D | 0.4834 | |
| 88 | S | D | 0.0722 | |
| 89 | P | D | 0.0953 | |
| 90 | I | D | 0.0964 | |
| 91 | S | D | -0.6061 | |
| 92 | I | D | -0.7272 | |
| 93 | N | D | -1.6560 | |
| 94 | Y | D | -1.2810 | |
| 95 | R | D | -2.3562 | |
| 96 | T | D | -1.5445 |