| Chain sequence(s) |
L: SSQQGSWPFEPFV
input PDB |
| Selected Chain(s) | L |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with L chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:09)
[INFO] Main: Simulation completed successfully. (00:00:09)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 75 | S | L | 0.0715 | |
| 76 | S | L | -0.4704 | |
| 77 | Q | L | -1.4561 | |
| 78 | Q | L | -1.5023 | |
| 79 | G | L | -0.6907 | |
| 80 | S | L | 0.0962 | |
| 81 | W | L | 0.9489 | |
| 82 | P | L | 0.3099 | |
| 83 | F | L | 1.5677 | |
| 84 | E | L | -1.1733 | |
| 85 | P | L | -0.2208 | |
| 86 | F | L | 2.2117 | |
| 87 | V | L | 1.8543 |