| Chain sequence(s) |
A: ESCVWIPCLTATIGCSCKSKVCYRNGIPCG
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:38)
[INFO] Main: Simulation completed successfully. (00:00:39)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | A | -0.1960 | |
| 2 | S | A | 0.1908 | |
| 3 | C | A | 0.8052 | |
| 4 | V | A | 1.0767 | |
| 5 | W | A | 1.9939 | |
| 6 | I | A | 2.2902 | |
| 7 | P | A | 1.2755 | |
| 8 | C | A | 0.0000 | |
| 9 | L | A | 1.8082 | |
| 10 | T | A | 1.0622 | |
| 11 | A | A | 0.8291 | |
| 12 | T | A | 0.9755 | |
| 13 | I | A | 1.6390 | |
| 14 | G | A | 0.1318 | |
| 15 | C | A | 0.0000 | |
| 16 | S | A | -0.4373 | |
| 17 | C | A | -0.4353 | |
| 18 | K | A | -1.9006 | |
| 19 | S | A | -1.3343 | |
| 20 | K | A | -1.3095 | |
| 21 | V | A | -0.5853 | |
| 22 | C | A | 0.0000 | |
| 23 | Y | A | -0.6383 | |
| 24 | R | A | -0.9862 | |
| 25 | N | A | -1.4154 | |
| 26 | G | A | -0.6309 | |
| 27 | I | A | 1.0237 | |
| 28 | P | A | 0.0791 | |
| 29 | C | A | 0.1988 | |
| 30 | G | A | -0.2236 |