| Chain sequence(s) |
A: MNIFRLTGDLSHLAAIIILLLKIWKSRSCAGISGKSQLLFALVFTTRYLDLFTSFISLYNTSMKLIYIACSYATVYLIYMKFKATYDGNHDTFRVEFLIVPVGGLSFLVNHDFSPLEILWTFSIYLESVAILPQLFMISKTGEAETITTHYLFFLGLYRALYLVNWIWRYYFEGFFDLIAVVAGVVQTVLYCDFFYLYVTKVLK
C: QVQLVESGGGLVQAGGSLRLSCAASGFPVKRWSMTWYRQAPGKEREWVAAIRSAGHWTHYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCNVKDEGDFSYWYDYWGQGTQVTVSA input PDB |
| Selected Chain(s) | A,C |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:06:28)
[INFO] Main: Simulation completed successfully. (00:06:33)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 1.4632 | |
| 2 | N | A | 0.8182 | |
| 3 | I | A | 1.3008 | |
| 4 | F | A | 1.2840 | |
| 5 | R | A | 0.7108 | |
| 6 | L | A | 0.7568 | |
| 7 | T | A | 0.7706 | |
| 8 | G | A | 0.0000 | |
| 9 | D | A | 0.0000 | |
| 10 | L | A | 1.0848 | |
| 11 | S | A | 0.0000 | |
| 12 | H | A | 0.0000 | |
| 13 | L | A | 0.9598 | |
| 14 | A | A | 0.8336 | |
| 15 | A | A | 0.0000 | |
| 16 | I | A | 1.0018 | |
| 17 | I | A | 1.2054 | |
| 18 | I | A | 0.7382 | |
| 19 | L | A | 0.0000 | |
| 20 | L | A | 0.7435 | |
| 21 | L | A | 0.2570 | |
| 22 | K | A | -0.9339 | |
| 23 | I | A | 0.0000 | |
| 24 | W | A | -0.8112 | |
| 25 | K | A | -2.0616 | |
| 26 | S | A | -1.8258 | |
| 27 | R | A | -2.5662 | |
| 28 | S | A | -1.7872 | |
| 29 | C | A | 0.0000 | |
| 30 | A | A | -1.2565 | |
| 31 | G | A | 0.0000 | |
| 32 | I | A | 0.0000 | |
| 33 | S | A | 0.0000 | |
| 34 | G | A | 0.0000 | |
| 35 | K | A | -0.2116 | |
| 36 | S | A | 0.0000 | |
| 37 | Q | A | 0.4582 | |
| 38 | L | A | 1.0629 | |
| 39 | L | A | 0.0000 | |
| 40 | F | A | 0.7096 | |
| 41 | A | A | 0.0000 | |
| 42 | L | A | 0.9206 | |
| 43 | V | A | 0.0000 | |
| 44 | F | A | 0.0000 | |
| 45 | T | A | 0.7280 | |
| 46 | T | A | 0.7353 | |
| 47 | R | A | 0.4250 | |
| 48 | Y | A | 0.0000 | |
| 49 | L | A | 1.6950 | |
| 50 | D | A | 0.9433 | |
| 51 | L | A | 1.7757 | |
| 52 | F | A | 2.5982 | |
| 53 | T | A | 1.5233 | |
| 54 | S | A | 1.3468 | |
| 55 | F | A | 2.7986 | |
| 56 | I | A | 1.5519 | |
| 57 | S | A | 1.5105 | |
| 58 | L | A | 2.1105 | |
| 59 | Y | A | 1.3301 | |
| 60 | N | A | 0.0000 | |
| 61 | T | A | 1.6337 | |
| 62 | S | A | 0.9773 | |
| 63 | M | A | 0.9836 | |
| 64 | K | A | 0.8134 | |
| 65 | L | A | 1.3612 | |
| 66 | I | A | 1.4226 | |
| 67 | Y | A | 0.0000 | |
| 68 | I | A | 1.0611 | |
| 69 | A | A | 0.9966 | |
| 70 | C | A | 1.2393 | |
| 71 | S | A | 0.0000 | |
| 72 | Y | A | 1.5546 | |
| 73 | A | A | 1.0017 | |
| 74 | T | A | 0.0000 | |
| 75 | V | A | 0.9986 | |
| 76 | Y | A | 1.1227 | |
| 77 | L | A | 0.0000 | |
| 78 | I | A | 0.0000 | |
| 79 | Y | A | 0.2948 | |
| 80 | M | A | 0.4545 | |
| 81 | K | A | -0.8286 | |
| 82 | F | A | -0.9687 | |
| 83 | K | A | -1.5244 | |
| 84 | A | A | -0.9118 | |
| 85 | T | A | -0.9001 | |
| 86 | Y | A | -0.7123 | |
| 87 | D | A | -1.3120 | |
| 88 | G | A | -1.3662 | |
| 89 | N | A | -1.7085 | |
| 90 | H | A | -1.2811 | |
| 91 | D | A | 0.0000 | |
| 92 | T | A | -0.8525 | |
| 93 | F | A | -0.1143 | |
| 94 | R | A | -1.3411 | |
| 95 | V | A | 0.1566 | |
| 96 | E | A | 0.3350 | |
| 97 | F | A | 1.7551 | |
| 98 | L | A | 0.0000 | |
| 99 | I | A | 1.4924 | |
| 100 | V | A | 2.1869 | |
| 101 | P | A | 1.3347 | |
| 102 | V | A | 0.0000 | |
| 103 | G | A | 1.4017 | |
| 104 | G | A | 1.5144 | |
| 105 | L | A | 2.1601 | |
| 106 | S | A | 0.0000 | |
| 107 | F | A | 3.3136 | |
| 108 | L | A | 3.2617 | |
| 109 | V | A | 2.4178 | |
| 110 | N | A | 1.5149 | |
| 111 | H | A | 0.1885 | |
| 112 | D | A | 0.3614 | |
| 113 | F | A | 2.3085 | |
| 114 | S | A | 1.0329 | |
| 115 | P | A | 0.6830 | |
| 116 | L | A | 0.5804 | |
| 117 | E | A | 0.0000 | |
| 118 | I | A | 0.0000 | |
| 119 | L | A | 1.3796 | |
| 120 | W | A | 0.6287 | |
| 121 | T | A | 0.0000 | |
| 122 | F | A | 0.9580 | |
| 123 | S | A | 0.0000 | |
| 124 | I | A | 0.4872 | |
| 125 | Y | A | 0.0000 | |
| 126 | L | A | 0.0000 | |
| 127 | E | A | 0.0000 | |
| 128 | S | A | 0.0000 | |
| 129 | V | A | 0.6293 | |
| 130 | A | A | 0.0000 | |
| 131 | I | A | 0.0000 | |
| 132 | L | A | 0.8803 | |
| 133 | P | A | 0.0000 | |
| 134 | Q | A | 0.0000 | |
| 135 | L | A | 0.0000 | |
| 136 | F | A | 1.4846 | |
| 137 | M | A | 0.0000 | |
| 138 | I | A | 0.0000 | |
| 139 | S | A | -0.6623 | |
| 140 | K | A | -1.5758 | |
| 141 | T | A | -1.3177 | |
| 142 | G | A | -1.5935 | |
| 143 | E | A | -2.3298 | |
| 144 | A | A | 0.0000 | |
| 145 | E | A | -2.1983 | |
| 146 | T | A | 0.0000 | |
| 147 | I | A | 0.0000 | |
| 148 | T | A | -0.5842 | |
| 149 | T | A | 0.1209 | |
| 150 | H | A | -0.3682 | |
| 151 | Y | A | 0.0000 | |
| 152 | L | A | 0.0000 | |
| 153 | F | A | 1.3677 | |
| 154 | F | A | 1.1576 | |
| 155 | L | A | 0.0000 | |
| 156 | G | A | 0.9004 | |
| 157 | L | A | 1.2693 | |
| 158 | Y | A | 0.0000 | |
| 159 | R | A | 0.0000 | |
| 160 | A | A | 0.8171 | |
| 161 | L | A | 1.2717 | |
| 162 | Y | A | 1.3432 | |
| 163 | L | A | 1.8217 | |
| 164 | V | A | 1.9810 | |
| 165 | N | A | 0.0000 | |
| 166 | W | A | 2.0568 | |
| 167 | I | A | 3.0520 | |
| 168 | W | A | 2.7552 | |
| 169 | R | A | 0.0000 | |
| 170 | Y | A | 2.6972 | |
| 171 | Y | A | 2.9731 | |
| 172 | F | A | 2.6599 | |
| 173 | E | A | 1.5226 | |
| 174 | G | A | 0.0000 | |
| 175 | F | A | 1.5200 | |
| 176 | F | A | 1.5930 | |
| 177 | D | A | 0.0000 | |
| 178 | L | A | 2.3676 | |
| 179 | I | A | 1.7988 | |
| 180 | A | A | 1.6901 | |
| 181 | V | A | 2.5035 | |
| 182 | V | A | 3.0463 | |
| 183 | A | A | 0.0000 | |
| 184 | G | A | 0.0000 | |
| 185 | V | A | 2.8123 | |
| 186 | V | A | 2.7013 | |
| 187 | Q | A | 0.0000 | |
| 188 | T | A | 1.8551 | |
| 189 | V | A | 2.3862 | |
| 190 | L | A | 1.4757 | |
| 191 | Y | A | 0.0000 | |
| 192 | C | A | 1.2362 | |
| 193 | D | A | 0.1749 | |
| 194 | F | A | 0.0000 | |
| 195 | F | A | 1.4546 | |
| 196 | Y | A | 1.4503 | |
| 197 | L | A | 0.7885 | |
| 198 | Y | A | 0.0000 | |
| 199 | V | A | 1.2146 | |
| 200 | T | A | 0.2922 | |
| 201 | K | A | -0.8539 | |
| 202 | V | A | -0.5243 | |
| 203 | L | A | 0.1420 | |
| 204 | K | A | -1.2022 | |
| 2 | Q | C | -1.2556 | |
| 3 | V | C | -0.9138 | |
| 4 | Q | C | -1.1262 | |
| 5 | L | C | 0.0000 | |
| 6 | V | C | 0.7782 | |
| 7 | E | C | 0.0000 | |
| 8 | S | C | -0.6136 | |
| 9 | G | C | -1.1668 | |
| 10 | G | C | -0.6418 | |
| 11 | G | C | 0.2722 | |
| 12 | L | C | 1.1502 | |
| 13 | V | C | 0.1218 | |
| 14 | Q | C | -1.1391 | |
| 15 | A | C | -1.2581 | |
| 16 | G | C | -1.2471 | |
| 17 | G | C | -0.8225 | |
| 18 | S | C | -1.2204 | |
| 19 | L | C | -0.9517 | |
| 20 | R | C | -2.2298 | |
| 21 | L | C | 0.0000 | |
| 22 | S | C | -0.4746 | |
| 23 | C | C | 0.0000 | |
| 24 | A | C | -0.4569 | |
| 25 | A | C | -0.7536 | |
| 26 | S | C | -0.9410 | |
| 27 | G | C | -0.7077 | |
| 28 | F | C | 0.4363 | |
| 29 | P | C | -0.4332 | |
| 30 | V | C | -0.2984 | |
| 31 | K | C | -1.5967 | |
| 32 | R | C | -0.9046 | |
| 33 | W | C | -0.4880 | |
| 34 | S | C | 0.0000 | |
| 35 | M | C | 0.0000 | |
| 36 | T | C | 0.0000 | |
| 37 | W | C | 0.0000 | |
| 38 | Y | C | 0.0000 | |
| 39 | R | C | 0.0000 | |
| 40 | Q | C | -2.3198 | |
| 41 | A | C | -2.0679 | |
| 42 | P | C | -1.4567 | |
| 43 | G | C | -2.0358 | |
| 44 | K | C | -3.5245 | |
| 45 | E | C | -3.9532 | |
| 46 | R | C | -3.3473 | |
| 47 | E | C | -2.2488 | |
| 48 | W | C | -0.2816 | |
| 49 | V | C | 0.0000 | |
| 50 | A | C | 0.0000 | |
| 51 | A | C | 0.0000 | |
| 52 | I | C | 0.0000 | |
| 53 | R | C | 0.0000 | |
| 54 | S | C | -0.8166 | |
| 55 | A | C | -0.6016 | |
| 56 | G | C | -0.6222 | |
| 57 | H | C | -1.1687 | |
| 58 | W | C | -0.2282 | |
| 59 | T | C | -0.1875 | |
| 60 | H | C | -0.2995 | |
| 61 | Y | C | -0.9435 | |
| 62 | A | C | -1.4020 | |
| 63 | D | C | -2.4725 | |
| 64 | S | C | -1.8352 | |
| 65 | V | C | 0.0000 | |
| 66 | K | C | -2.6326 | |
| 67 | G | C | -1.7739 | |
| 68 | R | C | -1.4120 | |
| 69 | F | C | 0.0000 | |
| 70 | T | C | -0.9602 | |
| 71 | I | C | 0.0000 | |
| 72 | S | C | -0.6647 | |
| 73 | R | C | -1.6469 | |
| 74 | D | C | -2.1935 | |
| 75 | N | C | -2.6527 | |
| 76 | A | C | -1.9470 | |
| 77 | K | C | -2.9053 | |
| 78 | N | C | -2.7387 | |
| 79 | T | C | 0.0000 | |
| 80 | V | C | 0.0000 | |
| 81 | Y | C | -0.7842 | |
| 82 | L | C | 0.0000 | |
| 83 | Q | C | -1.5657 | |
| 84 | M | C | 0.0000 | |
| 85 | N | C | -1.4412 | |
| 86 | S | C | -1.1384 | |
| 87 | L | C | 0.0000 | |
| 88 | K | C | -1.9513 | |
| 89 | P | C | -1.6875 | |
| 90 | E | C | -2.2087 | |
| 91 | D | C | 0.0000 | |
| 92 | T | C | -0.7896 | |
| 93 | A | C | 0.0000 | |
| 94 | V | C | -0.4030 | |
| 95 | Y | C | 0.0000 | |
| 96 | Y | C | -0.2366 | |
| 97 | C | C | 0.0000 | |
| 98 | N | C | 0.0000 | |
| 99 | V | C | 0.0000 | |
| 100 | K | C | -0.1186 | |
| 101 | D | C | 0.0000 | |
| 102 | E | C | -0.6026 | |
| 103 | G | C | -0.6215 | |
| 104 | D | C | -0.3907 | |
| 105 | F | C | 0.0000 | |
| 106 | S | C | 0.1700 | |
| 107 | Y | C | 0.0000 | |
| 108 | W | C | 0.9393 | |
| 109 | Y | C | 0.0000 | |
| 110 | D | C | -0.1379 | |
| 111 | Y | C | -0.1741 | |
| 112 | W | C | 0.1549 | |
| 113 | G | C | -0.1419 | |
| 114 | Q | C | -0.8818 | |
| 115 | G | C | -0.4716 | |
| 116 | T | C | -0.5625 | |
| 117 | Q | C | -0.6491 | |
| 118 | V | C | 0.0000 | |
| 119 | T | C | -0.1842 | |
| 120 | V | C | 0.0000 | |
| 121 | S | C | -0.6794 | |
| 122 | A | C | -0.7459 |