Project name: 21.34E10

Status: done

Started: 2026-07-07 08:39:34
Settings
Chain sequence(s) H: QVQLQQPGTELVKPGASVKLSCKTSGYTFTSYWLHWVKQRPGQGLEWIGNINPNNGGTNYNEKFKTKATLTVDKSSSTAYMQLSRLTSEDSAVYYCLRLGPYYSNYFDYWGQGTTLTVSS
L: QIVLTQSPAIVSASPGEKVTISCSASSSVSYMYWYQQKPGSSPKPWIYRTSNLASGVPTRFSGSGSGTSYSLTISGMEAEDAATYYCQHFHNYPFTFGSGTKLEIK
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:52)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:54)
Show buried residues

Minimal score value
-3.2966
Maximal score value
1.9035
Average score
-0.5623
Total score value
-127.0825

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Q H -1.4364
2 V H -0.9661
3 Q H -1.6155
4 L H 0.0000
5 Q H -2.1311
6 Q H -1.5557
7 P H -1.1519
8 G H -1.0910
9 T H -0.2971
11 E H -0.2854
12 L H 0.8442
13 V H -0.2721
14 K H -1.8436
15 P H -1.7016
16 G H -1.7907
17 A H -1.4396
18 S H -1.6263
19 V H 0.0000
20 K H -1.9224
21 L H 0.0000
22 S H -0.8888
23 C H 0.0000
24 K H -1.6459
25 T H 0.0000
26 S H -1.1324
27 G H -0.9606
28 Y H -0.3756
29 T H -0.1042
30 F H 0.0000
35 T H -1.1299
36 S H -0.3595
37 Y H 0.1353
38 W H 0.0496
39 L H 0.0000
40 H H 0.0000
41 W H 0.0000
42 V H 0.0000
43 K H -0.5322
44 Q H -0.8643
45 R H -1.4018
46 P H -1.0592
47 G H -1.3517
48 Q H -1.8568
49 G H -1.1850
50 L H 0.0000
51 E H -0.8931
52 W H 0.0000
53 I H 0.0000
54 G H 0.0000
55 N H 0.0000
56 I H 0.0000
57 N H -1.0511
58 P H 0.0000
59 N H -2.3663
62 N H -2.2854
63 G H -1.5086
64 G H -1.0453
65 T H -0.5594
66 N H -0.8000
67 Y H -1.1617
68 N H 0.0000
69 E H -3.2966
70 K H -3.1132
71 F H 0.0000
72 K H -2.9362
74 T H -1.7808
75 K H -1.7515
76 A H 0.0000
77 T H -0.7609
78 L H 0.0000
79 T H -0.4329
80 V H -0.9046
81 D H -1.5187
82 K H -2.4206
83 S H -1.2070
84 S H -0.9901
85 S H -1.1306
86 T H 0.0000
87 A H 0.0000
88 Y H -0.4636
89 M H 0.0000
90 Q H -1.2957
91 L H 0.0000
92 S H -1.5708
93 R H -2.4070
94 L H 0.0000
95 T H -1.6314
96 S H -1.4204
97 E H -2.0070
98 D H 0.0000
99 S H -0.6723
100 A H 0.0000
101 V H -0.1563
102 Y H 0.0000
103 Y H 0.0000
104 C H 0.0000
105 L H 0.0000
106 R H 0.0000
107 L H 0.0000
108 G H 0.0000
109 P H 0.9785
110 Y H 1.9035
111 Y H 1.9023
112 S H 0.6980
113 N H 0.5388
114 Y H 0.3762
115 F H 0.0000
116 D H -0.1357
117 Y H 0.0747
118 W H -0.4250
119 G H 0.0000
120 Q H -1.6512
121 G H 0.0000
122 T H 0.0000
123 T H -0.2604
124 L H 0.0000
125 T H -0.1347
126 V H 0.0000
127 S H -0.5441
128 S H -0.7293
1 Q L -1.2006
2 I L 0.0000
3 V L 1.3174
4 L L 0.0000
5 T L 0.1674
6 Q L 0.0000
7 S L -0.0709
8 P L 0.2183
9 A L 0.6079
10 I L 1.3962
11 V L 0.3625
12 S L -0.5311
13 A L 0.0000
14 S L -1.7532
15 P L -1.7411
16 G L -1.9543
17 E L -2.5457
18 K L -2.5534
19 V L 0.0000
20 T L -0.6236
21 I L 0.0000
22 S L -0.3403
23 C L 0.0000
24 S L -0.1679
25 A L 0.0000
26 S L 0.0254
27 S L -0.3761
28 S L -0.6012
29 V L 0.0000
37 S L -0.4562
38 Y L 0.0523
39 M L 0.0000
40 Y L 0.0000
41 W L 0.0000
42 Y L 0.0000
43 Q L 0.0000
44 Q L -0.9271
45 K L -1.2598
46 P L -0.8646
47 G L -0.9373
48 S L -0.9856
49 S L -0.8039
50 P L 0.0000
51 K L -0.9753
52 P L -0.4138
53 W L 0.0000
54 I L 0.0000
55 Y L -0.3681
56 R L -0.7214
57 T L 0.0000
65 S L -0.8326
66 N L -1.1571
67 L L -0.3950
68 A L -0.4215
69 S L -0.5161
70 G L -0.5356
71 V L 0.0000
72 P L -0.2616
74 T L -0.2664
75 R L -0.7953
76 F L 0.0000
77 S L -0.4358
78 G L 0.0000
79 S L -0.6904
80 G L -0.6740
83 S L -0.5690
84 G L -0.5348
85 T L -0.5172
86 S L -0.6505
87 Y L 0.0000
88 S L -0.4000
89 L L 0.0000
90 T L -0.5583
91 I L 0.0000
92 S L -1.5874
93 G L -1.8637
94 M L 0.0000
95 E L -2.0996
96 A L -1.4894
97 E L -1.5785
98 D L 0.0000
99 A L -1.2900
100 A L 0.0000
101 T L 0.0000
102 Y L 0.0000
103 Y L 0.0000
104 C L 0.0000
105 Q L 0.0000
106 H L 0.0000
107 F L -0.3602
108 H L -1.4208
109 N L -1.5882
114 Y L -0.6019
115 P L -0.9508
116 F L 0.0000
117 T L -0.0700
118 F L 0.0000
119 G L 0.0000
120 S L -0.4432
121 G L 0.0000
122 T L 0.0000
123 K L -0.6922
124 L L 0.0000
125 E L -1.0876
126 I L -1.1170
127 K L -1.7129
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Laboratory of Theory of Biopolymers 2018