| Chain sequence(s) |
A: FFKGHGF
C: FFKGHGF B: FFKGHGF D: FFKGHGF input PDB |
| Selected Chain(s) | A,C,B,D |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:53)
[INFO] Main: Simulation completed successfully. (00:01:54)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | F | A | 0.9628 | |
| 2 | F | A | 0.0000 | |
| 3 | K | A | -1.6598 | |
| 4 | G | A | -0.8216 | |
| 5 | H | A | -0.1160 | |
| 6 | G | A | 1.5901 | |
| 7 | F | A | 3.6285 | |
| 1 | F | B | 2.4838 | |
| 2 | F | B | 2.5235 | |
| 3 | K | B | 0.9284 | |
| 4 | G | B | 0.0000 | |
| 5 | H | B | 1.4631 | |
| 6 | G | B | 0.0000 | |
| 7 | F | B | 3.5940 | |
| 1 | F | C | 1.9977 | |
| 2 | F | C | 1.3120 | |
| 3 | K | C | -0.9604 | |
| 4 | G | C | 0.0000 | |
| 5 | H | C | -0.0705 | |
| 6 | G | C | 0.9031 | |
| 7 | F | C | 2.5431 | |
| 1 | F | D | 1.6818 | |
| 2 | F | D | 1.9141 | |
| 3 | K | D | -0.2942 | |
| 4 | G | D | 0.0000 | |
| 5 | H | D | 1.7475 | |
| 6 | G | D | 1.4287 | |
| 7 | F | D | 2.8267 |