| Chain sequence(s) |
A: AEAEAKAKAEAEAKAK
C: AEAEAKAKAEAEAKAK B: AEAEAKAKAEAEAKAK E: AEAEAKAKAEAEAKAK D: AEAEAKAKAEAEAKAK G: AEAEAKAKAEAEAKAK F: AEAEAKAKAEAEAKAK I: AEAEAKAKAEAEAKAK H: AEAEAKAKAEAEAKAK K: AEAEAKAKAEAEAKAK J: AEAEAKAKAEAEAKAK L: AEAEAKAKAEAEAKAK input PDB |
| Selected Chain(s) | A,C,B,E,D,G,F,I,H,K,J,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:13:26)
[INFO] Main: Simulation completed successfully. (00:13:29)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | A | A | -1.4755 | |
| 2 | E | A | -2.6067 | |
| 3 | A | A | -2.2591 | |
| 4 | E | A | -3.1114 | |
| 5 | A | A | -2.5679 | |
| 6 | K | A | -3.3294 | |
| 7 | A | A | -3.0964 | |
| 8 | K | A | -3.4409 | |
| 9 | A | A | -3.0083 | |
| 10 | E | A | -3.6891 | |
| 11 | A | A | -3.1337 | |
| 12 | E | A | -3.3779 | |
| 13 | A | A | -2.8626 | |
| 14 | K | A | -3.1149 | |
| 15 | A | A | -2.3447 | |
| 16 | K | A | -2.5489 | |
| 1 | A | B | -1.8448 | |
| 2 | E | B | -2.9361 | |
| 3 | A | B | -2.2170 | |
| 4 | E | B | -3.0730 | |
| 5 | A | B | -3.1392 | |
| 6 | K | B | -3.1212 | |
| 7 | A | B | -2.8164 | |
| 8 | K | B | -3.4956 | |
| 9 | A | B | 0.0000 | |
| 10 | E | B | -3.5421 | |
| 11 | A | B | -2.9892 | |
| 12 | E | B | -3.6212 | |
| 13 | A | B | 0.0000 | |
| 14 | K | B | -3.5482 | |
| 15 | A | B | -2.3806 | |
| 16 | K | B | -2.9297 | |
| 1 | A | C | -1.5689 | |
| 2 | E | C | -2.4376 | |
| 3 | A | C | -1.8905 | |
| 4 | E | C | -2.5018 | |
| 5 | A | C | -2.0811 | |
| 6 | K | C | -2.8663 | |
| 7 | A | C | -2.6059 | |
| 8 | K | C | -2.1868 | |
| 9 | A | C | -2.2804 | |
| 10 | E | C | -3.1633 | |
| 11 | A | C | -2.6281 | |
| 12 | E | C | -2.6290 | |
| 13 | A | C | -2.4928 | |
| 14 | K | C | -2.9815 | |
| 15 | A | C | -2.4469 | |
| 16 | K | C | -2.4513 | |
| 1 | A | D | -1.7870 | |
| 2 | E | D | -2.4317 | |
| 3 | A | D | -1.4447 | |
| 4 | E | D | -2.1962 | |
| 5 | A | D | -2.0123 | |
| 6 | K | D | -2.1479 | |
| 7 | A | D | -1.9099 | |
| 8 | K | D | -2.5728 | |
| 9 | A | D | -1.9852 | |
| 10 | E | D | -3.1467 | |
| 11 | A | D | -2.8749 | |
| 12 | E | D | -2.9288 | |
| 13 | A | D | -2.6760 | |
| 14 | K | D | -3.3616 | |
| 15 | A | D | -2.7886 | |
| 16 | K | D | -2.9949 | |
| 1 | A | E | -1.9083 | |
| 2 | E | E | -2.7243 | |
| 3 | A | E | -1.7252 | |
| 4 | E | E | -2.2135 | |
| 5 | A | E | -2.0695 | |
| 6 | K | E | -2.8319 | |
| 7 | A | E | -2.4211 | |
| 8 | K | E | -2.4623 | |
| 9 | A | E | -2.5171 | |
| 10 | E | E | -3.3951 | |
| 11 | A | E | -3.3076 | |
| 12 | E | E | -3.8312 | |
| 13 | A | E | -2.8631 | |
| 14 | K | E | -3.2130 | |
| 15 | A | E | -3.0314 | |
| 16 | K | E | -2.6201 | |
| 1 | A | F | -2.2154 | |
| 2 | E | F | -2.9972 | |
| 3 | A | F | -1.7326 | |
| 4 | E | F | -2.1332 | |
| 5 | A | F | -2.6471 | |
| 6 | K | F | -2.6698 | |
| 7 | A | F | -2.0188 | |
| 8 | K | F | -2.6447 | |
| 9 | A | F | -2.3021 | |
| 10 | E | F | -3.3294 | |
| 11 | A | F | -3.1583 | |
| 12 | E | F | -3.4562 | |
| 13 | A | F | -2.7001 | |
| 14 | K | F | -3.2545 | |
| 15 | A | F | -3.0235 | |
| 16 | K | F | -2.6941 | |
| 1 | A | G | -1.4793 | |
| 2 | E | G | -2.5245 | |
| 3 | A | G | -1.6442 | |
| 4 | E | G | -1.9885 | |
| 5 | A | G | -1.9492 | |
| 6 | K | G | -2.3128 | |
| 7 | A | G | -2.1380 | |
| 8 | K | G | -2.3329 | |
| 9 | A | G | -2.1397 | |
| 10 | E | G | -3.3158 | |
| 11 | A | G | -2.9148 | |
| 12 | E | G | -3.0234 | |
| 13 | A | G | -3.3368 | |
| 14 | K | G | -3.3663 | |
| 15 | A | G | -2.7453 | |
| 16 | K | G | -2.9148 | |
| 1 | A | H | -1.8190 | |
| 2 | E | H | -2.4939 | |
| 3 | A | H | -1.4861 | |
| 4 | E | H | -1.9940 | |
| 5 | A | H | -2.0817 | |
| 6 | K | H | -2.1061 | |
| 7 | A | H | -1.9166 | |
| 8 | K | H | -2.3513 | |
| 9 | A | H | -2.0271 | |
| 10 | E | H | -3.1651 | |
| 11 | A | H | -2.8242 | |
| 12 | E | H | -2.8486 | |
| 13 | A | H | -2.8743 | |
| 14 | K | H | -3.1339 | |
| 15 | A | H | -2.7892 | |
| 16 | K | H | -2.6884 | |
| 1 | A | I | -1.6397 | |
| 2 | E | I | -2.4765 | |
| 3 | A | I | -1.6716 | |
| 4 | E | I | -2.0713 | |
| 5 | A | I | -2.1692 | |
| 6 | K | I | -2.8705 | |
| 7 | A | I | -2.2691 | |
| 8 | K | I | -2.3110 | |
| 9 | A | I | -2.3452 | |
| 10 | E | I | -3.2324 | |
| 11 | A | I | -2.7028 | |
| 12 | E | I | -3.1325 | |
| 13 | A | I | -2.6068 | |
| 14 | K | I | -3.0466 | |
| 15 | A | I | -2.7618 | |
| 16 | K | I | -2.4985 | |
| 1 | A | J | -1.4897 | |
| 2 | E | J | -2.5064 | |
| 3 | A | J | -1.6958 | |
| 4 | E | J | -2.2134 | |
| 5 | A | J | -2.2719 | |
| 6 | K | J | -2.3553 | |
| 7 | A | J | -2.4363 | |
| 8 | K | J | -3.1792 | |
| 9 | A | J | -2.5529 | |
| 10 | E | J | -3.5848 | |
| 11 | A | J | -3.3496 | |
| 12 | E | J | -3.6357 | |
| 13 | A | J | -3.4009 | |
| 14 | K | J | -3.4169 | |
| 15 | A | J | -3.1941 | |
| 16 | K | J | -2.9724 | |
| 1 | A | K | -1.5694 | |
| 2 | E | K | -2.6543 | |
| 3 | A | K | -1.8486 | |
| 4 | E | K | -2.3367 | |
| 5 | A | K | -2.4301 | |
| 6 | K | K | -2.7916 | |
| 7 | A | K | -2.6117 | |
| 8 | K | K | -3.4727 | |
| 9 | A | K | -2.8249 | |
| 10 | E | K | -3.6624 | |
| 11 | A | K | -3.2176 | |
| 12 | E | K | -3.5306 | |
| 13 | A | K | -3.5055 | |
| 14 | K | K | -3.3504 | |
| 15 | A | K | -2.9753 | |
| 16 | K | K | -2.9993 | |
| 1 | A | L | -1.5493 | |
| 2 | E | L | -3.0349 | |
| 3 | A | L | -2.3460 | |
| 4 | E | L | -3.2900 | |
| 5 | A | L | -2.9637 | |
| 6 | K | L | -3.5066 | |
| 7 | A | L | -3.0248 | |
| 8 | K | L | -3.6571 | |
| 9 | A | L | 0.0000 | |
| 10 | E | L | -3.8336 | |
| 11 | A | L | -2.9225 | |
| 12 | E | L | -3.7108 | |
| 13 | A | L | 0.0000 | |
| 14 | K | L | -3.3327 | |
| 15 | A | L | -2.3331 | |
| 16 | K | L | -2.9272 |