Project name: 5e849b55e7cde1d

Status: done

Started: 2025-02-25 21:12:15
Settings
Chain sequence(s) A: RGQTCYRPLRGDGLAPLGRTTYPRPHEYLSPADLPKSWDWRNVDGVNYASITRNQHIPQYCGSCWAHASTSAMADRINIKRKGAWPSTLLSVQNVIDCGNAGSCEGGNDLSVWDYAHQHGIPDETCNNYQAKDQECDKFNQCGTCNEFKECHAIRNYTLWRVGDYGSLSGREKMMAEIYANGPISCGIMATERLANYTGGIYAEYQDTTYINHVVSVAGWGISDGTEYWIVRNSWGEPWGERGWLRIVTSTYKDGKGARYNLAIEEHCTFGDPIV
B: FRRGQTCYRPLREYLSPADLPKSWDWRNVDGVNYASITRNQHIPQYCGSCWAHASTSAMADRINIKRKGAWPSTLLSVQNVIDCGNAGSCEGGNDLSVWDYAHQHGIPDETCNNYQAKDQECDKFNQCGTCNEFKECHAIRNYTLWRVGDYGSLSGREKMMAEIYANGPISCGIMATERLANYTGGIYAEYQDTTYINHVVSVAGWGISDGTEYWIVRNSWGEPWGERGWLRIVTSTYKDGKGARYNLAIEEHCTFGDPIV
input PDB
Selected Chain(s) A,B
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:05:40)
[INFO]       Main:     Simulation completed successfully.                                          (00:05:44)
Show buried residues

Minimal score value
-3.2497
Maximal score value
2.2497
Average score
-0.6441
Total score value
-345.2384

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
6P R A -2.6216
7P G A -1.8516
8P Q A -2.0979
9P T A -1.4386
10P C A 0.0000
11P Y A 0.0000
12P R A -1.6600
13P P A -1.3912
14P L A -1.2359
15P R A -2.4971
16P G A -2.0129
17P D A -2.2202
18P G A -1.0039
19P L A 0.5147
20P A A 0.3919
21P P A -0.2306
22P L A 0.1007
23P G A -0.7517
24P R A -1.0151
25P T A -0.5260
26P T A -0.1208
27P Y A 0.2192
28P P A -0.1845
29P R A -0.4215
30P P A -0.5288
31P H A -0.7542
32P E A -0.2219
33P Y A 0.8584
34P L A 0.3717
35P S A -0.4566
36P P A -1.1676
37P A A -1.2602
38P D A -1.7523
1 L A -1.2518
2 P A -1.1869
3 K A -1.6803
4 S A -0.5101
5 W A -0.3761
6 D A -1.0662
7 W A 0.0000
8 R A -1.8994
9 N A -2.3958
10 V A 0.0000
11 D A -2.3539
12 G A -1.7054
13 V A -1.3525
14 N A -1.9864
15 Y A -1.0889
16 A A -0.1914
17 S A 0.7215
18 I A 1.7872
19 T A 0.0850
20 R A -0.0019
21 N A -0.2964
22 Q A 0.0000
23 H A 0.4994
24 I A 1.2693
25 P A 0.3331
26 Q A -0.1152
27 Y A 0.4647
28 C A 0.0000
29 G A 0.0000
30 S A 0.0000
31 C A 0.0000
32 W A 0.0000
33 A A 0.0000
34 H A 0.0000
35 A A 0.0000
36 S A 0.0000
37 T A 0.0000
38 S A 0.0000
39 A A 0.0000
40 M A 0.0000
41 A A 0.0000
42 D A 0.0000
43 R A 0.0000
44 I A 0.0000
45 N A 0.0000
46 I A -1.2535
47 K A -1.3024
48 R A -1.2302
49 K A -2.1545
50 G A -1.3819
51 A A -0.4525
52 W A 0.6764
53 P A 0.4067
54 S A 0.2885
55 T A 0.0000
56 L A 0.3647
57 L A 0.0000
58 S A 0.0000
59 V A 0.0000
60 Q A 0.0000
61 N A 0.0000
62 V A 0.0000
63 I A 0.0000
64 D A -1.6730
65 C A 0.0000
66 G A 0.0000
67 N A -1.3495
68 A A 0.0000
69 G A -1.4380
70 S A -1.7625
71 C A -1.5080
72 E A -2.3805
73 G A 0.0000
74 G A 0.0000
75 N A 0.0000
76 D A 0.0000
77 L A 0.0000
78 S A -0.3389
79 V A 0.0000
80 W A 0.0000
81 D A -1.0557
82 Y A 0.0000
83 A A 0.0000
84 H A -1.3001
85 Q A -1.7267
86 H A -1.1413
87 G A 0.0000
88 I A 0.0000
89 P A 0.0000
90 D A -0.5234
91 E A -0.7308
92 T A -0.6483
93 C A 0.0000
94 N A 0.0000
95 N A -1.4794
96 Y A -0.6922
97 Q A -1.1468
98 A A 0.0000
99 K A -1.9173
100 D A -2.9761
101 Q A -2.3115
102 E A -2.5988
103 C A -1.7645
104 D A -2.3205
105 K A -2.5053
106 F A -0.9259
107 N A -1.2996
108 Q A -1.2423
109 C A 0.0000
110 G A -0.4947
111 T A -0.4091
112 C A -1.0700
113 N A -2.1935
114 E A -2.3257
115 F A -0.4000
116 K A -2.1456
117 E A -2.7253
118 C A -1.0637
119 H A -1.2934
120 A A 0.0000
121 I A -0.9256
122 R A -2.4145
123 N A -1.8236
124 Y A -0.6848
125 T A -0.1574
126 L A 0.0273
127 W A 0.2367
128 R A -0.7474
129 V A 0.0000
130 G A -0.3300
131 D A 0.0000
132 Y A 0.0000
133 G A -0.4449
134 S A -0.4800
135 L A -0.9630
136 S A -1.5806
137 G A -1.8320
138 R A -2.0550
139 E A -2.7712
140 K A -2.4712
141 M A 0.0000
142 M A 0.0000
143 A A -1.0302
144 E A 0.0000
145 I A 0.0000
146 Y A 0.2510
147 A A 0.0047
148 N A 0.0000
149 G A 0.0000
150 P A 0.0000
151 I A 0.0000
152 S A 0.0000
153 C A 0.0000
154 G A 0.0000
155 I A 0.0000
156 M A 0.4868
157 A A -0.5670
158 T A -2.0148
159 E A -3.2497
160 R A -3.1347
161 L A 0.0000
162 A A -1.8588
163 N A -2.3851
164 Y A 0.0000
165 T A -1.1905
166 G A -0.9528
167 G A -0.2504
168 I A 0.4236
169 Y A -0.0054
170 A A 0.1154
171 E A 0.0000
172 Y A 0.2694
173 Q A -0.7230
174 D A -1.8209
175 T A -0.6301
176 T A -0.2975
177 Y A 0.9753
178 I A 0.3856
179 N A -0.2478
180 H A 0.0000
181 V A 0.0000
182 V A 0.0000
183 S A 0.0000
184 V A 0.0000
185 A A 0.0000
186 G A 0.0000
187 W A 0.0000
188 G A 0.0000
189 I A 0.3793
190 S A -0.4277
191 D A -1.7520
192 G A -0.9911
193 T A -0.3941
194 E A 0.0000
195 Y A 0.4349
196 W A 0.0000
197 I A 0.0000
198 V A 0.0000
199 R A 0.0000
200 N A 0.0000
201 S A 0.0000
202 W A -0.5071
203 G A 0.0000
204 E A -2.6633
205 P A -1.7778
206 W A 0.0000
207 G A -1.6594
208 E A -2.0284
209 R A -2.9646
210 G A 0.0000
211 W A 0.0000
212 L A 0.0000
213 R A -0.2470
214 I A 0.0000
215 V A 0.0000
216 T A 0.0000
217 S A -1.4491
218 T A -1.3575
219 Y A -1.6816
220 K A -2.8274
221 D A -2.9583
222 G A -2.4609
223 K A -2.5780
224 G A 0.0000
225 A A -1.6319
226 R A -2.0262
227 Y A -0.6478
228 N A 0.0000
229 L A 0.0000
230 A A 0.0000
231 I A 0.0000
232 E A 0.0000
233 E A -1.8627
234 H A -1.1354
235 C A 0.0000
236 T A 0.0000
237 F A 0.0000
238 G A 0.0000
239 D A 0.0000
240 P A 0.0000
241 I A 1.6128
242 V A 1.9059
4P F B -1.3262
5P R B -2.9505
6P R B -3.0237
7P G B -1.9348
8P Q B -1.7353
9P T B -1.2320
10P C B 0.0000
11P Y B 0.0000
12P R B -1.3450
13P P B -0.4739
14P L B 0.6775
15P R B -1.7385
32 E B -2.0593
33P Y B 0.6118
34P L B -0.0178
35P S B -0.8033
36P P B -1.4571
37P A B -1.0646
38P D B -1.9037
1 L B -1.2295
2 P B -1.1515
3 K B -1.8195
4 S B -0.7272
5 W B -0.4238
6 D B -0.8706
7 W B 0.0000
8 R B -1.8858
9 N B -2.3174
10 V B -1.5802
11 D B -2.2261
12 G B -1.6581
13 V B -1.2297
14 N B -1.9107
15 Y B -0.9430
16 A B -0.1667
17 S B 0.7183
18 I B 1.8486
19 T B 0.2082
20 R B -0.1157
21 N B -0.2378
22 Q B 0.0000
23 H B 0.5244
24 I B 1.1785
25 P B 0.2828
26 Q B -0.2656
27 Y B 0.5002
28 C B 0.0000
29 G B 0.0000
30 S B 0.0000
31 C B 0.0000
32 W B 0.0000
33 A B 0.0000
34 H B 0.0000
35 A B 0.0000
36 S B 0.0000
37 T B 0.0000
38 S B 0.0000
39 A B 0.0000
40 M B 0.0000
41 A B 0.0000
42 D B 0.0000
43 R B 0.0000
44 I B 0.0000
45 N B 0.0000
46 I B -0.9877
47 K B -0.8972
48 R B -1.1175
49 K B -1.9452
50 G B -1.2481
51 A B -0.3856
52 W B 0.6738
53 P B 0.4105
54 S B 0.2865
55 T B 0.0000
56 L B 0.3902
57 L B 0.0000
58 S B 0.0000
59 V B 0.0000
60 Q B 0.0000
61 N B 0.0000
62 V B 0.0000
63 I B 0.0000
64 D B -1.7574
65 C B -1.0972
66 G B 0.0000
67 N B -1.3657
68 A B 0.0000
69 G B -1.3926
70 S B -1.8192
71 C B -1.5993
72 E B -2.3033
73 G B 0.0000
74 G B 0.0000
75 N B 0.0000
76 D B 0.0000
77 L B 0.0289
78 S B -0.2861
79 V B 0.0000
80 W B 0.0000
81 D B -1.3966
82 Y B 0.0000
83 A B 0.0000
84 H B -1.7440
85 Q B -1.8974
86 H B -1.2084
87 G B 0.0000
88 I B 0.0000
89 P B 0.0000
90 D B -0.4685
91 E B 0.0000
92 T B -0.6054
93 C B 0.0000
94 N B -0.9191
95 N B -1.4895
96 Y B -0.8023
97 Q B -1.4559
98 A B 0.0000
99 K B -2.4940
100 D B -3.2467
101 Q B -2.4902
102 E B -2.6758
103 C B -1.8687
104 D B -2.3297
105 K B -2.5250
106 F B -1.0068
107 N B -1.3933
108 Q B -1.3265
109 C B 0.0000
110 G B -0.5190
111 T B -0.4060
112 C B -0.9981
113 N B -2.1982
114 E B -2.3087
115 F B -0.4089
116 K B -2.1041
117 E B -2.6847
118 C B -1.0055
119 H B -1.1784
120 A B -0.9376
121 I B -0.9386
122 R B -2.4166
123 N B -1.8213
124 Y B -0.6651
125 T B -0.1208
126 L B 0.0692
127 W B 0.5035
128 R B -0.6841
129 V B 0.0000
130 G B -1.2406
131 D B -1.9136
132 Y B -1.0461
133 G B -1.0546
134 S B 0.0000
135 L B 0.0000
136 S B -1.9135
137 G B -1.8409
138 R B -1.7705
139 E B -1.9777
140 K B -1.6924
141 M B 0.0000
142 M B 0.0000
143 A B 0.0000
144 E B 0.0000
145 I B 0.0000
146 Y B 0.2254
147 A B 0.1832
148 N B -0.6322
149 G B 0.0000
150 P B 0.0000
151 I B 0.0000
152 S B 0.0000
153 C B 0.0000
154 G B 0.0000
155 I B 0.0000
156 M B 0.0000
157 A B 0.0000
158 T B 0.0000
159 E B -2.3589
160 R B -2.6195
161 L B 0.0000
162 A B -1.4343
163 N B -1.9620
164 Y B 0.0000
165 T B -1.0338
166 G B -0.9500
167 G B -0.2185
168 I B 0.4038
169 Y B 0.0000
170 A B -0.0316
171 E B -0.3521
172 Y B 0.1989
173 Q B -0.9209
174 D B -2.0595
175 T B -0.8548
176 T B -0.2106
177 Y B 1.0925
178 I B 0.3412
179 N B -0.0645
180 H B 0.0000
181 V B 0.0000
182 V B 0.0000
183 S B 0.0000
184 V B 0.0000
185 A B 0.0000
186 G B 0.0000
187 W B 0.0000
188 G B 0.0000
189 I B -0.1907
190 S B -0.6685
191 D B -1.9103
192 G B -1.1659
193 T B -0.6226
194 E B -0.3612
195 Y B 0.2276
196 W B 0.0000
197 I B 0.0000
198 V B 0.0000
199 R B 0.0000
200 N B 0.0000
201 S B 0.0000
202 W B -0.4331
203 G B 0.0000
204 E B -2.1663
205 P B -1.5370
206 W B 0.0000
207 G B -1.5951
208 E B -1.9939
209 R B -2.7830
210 G B 0.0000
211 W B 0.0000
212 L B 0.0000
213 R B -0.3818
214 I B 0.0000
215 V B 0.0000
216 T B 0.0000
217 S B -1.2410
218 T B -1.2423
219 Y B -1.5312
220 K B -2.7526
221 D B -2.8826
222 G B -2.3326
223 K B -2.5706
224 G B 0.0000
225 A B -1.6328
226 R B -2.2035
227 Y B -0.7705
228 N B 0.0000
229 L B 0.0000
230 A B 0.0000
231 I B 0.0000
232 E B -1.5260
233 E B -1.8177
234 H B -1.6556
235 C B 0.0000
236 T B 0.0000
237 F B -0.3812
238 G B 0.0000
239 D B -1.0079
240 P B 0.0000
241 I B 1.9448
242 V B 2.2497
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Laboratory of Theory of Biopolymers 2018