| Chain sequence(s) |
A: QVQLQESGGGLVQAGGSLRLSCAASGYIFRKYRMGWYRQAPGKEREFVAGINGGSSTNYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCAAYRIVWDLLVYWGQGTQVTVSS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:35)
[INFO] Main: Simulation completed successfully. (00:01:36)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | A | -1.3915 | |
| 2 | V | A | -0.6046 | |
| 3 | Q | A | -1.5481 | |
| 4 | L | A | 0.0000 | |
| 5 | Q | A | -1.0217 | |
| 6 | E | A | 0.0000 | |
| 7 | S | A | -0.9063 | |
| 8 | G | A | -1.0220 | |
| 9 | G | A | -0.7777 | |
| 10 | G | A | -0.0549 | |
| 11 | L | A | 1.0382 | |
| 12 | V | A | -0.0489 | |
| 13 | Q | A | -1.3310 | |
| 14 | A | A | -1.6032 | |
| 15 | G | A | -1.4470 | |
| 16 | G | A | -0.9299 | |
| 17 | S | A | -1.2427 | |
| 18 | L | A | -0.9073 | |
| 19 | R | A | -2.1272 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -0.7376 | |
| 22 | C | A | 0.0000 | |
| 23 | A | A | -0.9042 | |
| 24 | A | A | 0.0000 | |
| 25 | S | A | -0.6671 | |
| 26 | G | A | -0.4394 | |
| 27 | Y | A | 0.3153 | |
| 28 | I | A | 0.0000 | |
| 29 | F | A | 0.0000 | |
| 30 | R | A | -2.9044 | |
| 31 | K | A | -2.7521 | |
| 32 | Y | A | -1.1957 | |
| 33 | R | A | -1.1774 | |
| 34 | M | A | 0.0000 | |
| 35 | G | A | 0.0000 | |
| 36 | W | A | 0.0000 | |
| 37 | Y | A | 0.1005 | |
| 38 | R | A | 0.0000 | |
| 39 | Q | A | -1.6748 | |
| 40 | A | A | -1.7337 | |
| 41 | P | A | -1.2276 | |
| 42 | G | A | -1.7177 | |
| 43 | K | A | -2.7839 | |
| 44 | E | A | -3.1166 | |
| 45 | R | A | -2.2208 | |
| 46 | E | A | -1.0556 | |
| 47 | F | A | 0.1146 | |
| 48 | V | A | 0.0000 | |
| 49 | A | A | 0.0000 | |
| 50 | G | A | 0.0000 | |
| 51 | I | A | 0.0000 | |
| 52 | N | A | -1.5510 | |
| 53 | G | A | -2.0332 | |
| 54 | G | A | -1.3976 | |
| 55 | S | A | -1.0400 | |
| 56 | S | A | -0.9975 | |
| 57 | T | A | -0.9954 | |
| 58 | N | A | -1.5348 | |
| 59 | Y | A | -1.1800 | |
| 60 | A | A | -1.3236 | |
| 61 | D | A | -2.4709 | |
| 62 | S | A | -1.7075 | |
| 63 | V | A | 0.0000 | |
| 64 | K | A | -2.7618 | |
| 65 | G | A | -1.7798 | |
| 66 | R | A | -1.5559 | |
| 67 | F | A | 0.0000 | |
| 68 | T | A | -0.9887 | |
| 69 | I | A | 0.0000 | |
| 70 | S | A | -0.5271 | |
| 71 | R | A | -1.3679 | |
| 72 | D | A | -1.7395 | |
| 73 | N | A | -2.0368 | |
| 74 | A | A | -1.5532 | |
| 75 | K | A | -2.1968 | |
| 76 | N | A | -1.7583 | |
| 77 | T | A | -1.1542 | |
| 78 | V | A | 0.0000 | |
| 79 | Y | A | -0.6296 | |
| 80 | L | A | 0.0000 | |
| 81 | Q | A | -1.2363 | |
| 82 | M | A | 0.0000 | |
| 83 | N | A | -1.4566 | |
| 84 | S | A | -1.3185 | |
| 85 | L | A | 0.0000 | |
| 86 | K | A | -2.7387 | |
| 87 | P | A | -2.0703 | |
| 88 | E | A | -2.4509 | |
| 89 | D | A | 0.0000 | |
| 90 | T | A | -0.9407 | |
| 91 | A | A | 0.0000 | |
| 92 | V | A | -0.3322 | |
| 93 | Y | A | 0.0000 | |
| 94 | Y | A | -0.2177 | |
| 95 | C | A | 0.0000 | |
| 96 | A | A | 0.0000 | |
| 97 | A | A | 0.0000 | |
| 98 | Y | A | 0.7540 | |
| 99 | R | A | 0.6316 | |
| 100 | I | A | 2.4356 | |
| 101 | V | A | 2.8093 | |
| 102 | W | A | 1.9166 | |
| 103 | D | A | 0.4470 | |
| 104 | L | A | 1.7191 | |
| 105 | L | A | 2.1035 | |
| 106 | V | A | 1.8131 | |
| 107 | Y | A | 1.3015 | |
| 108 | W | A | 0.6446 | |
| 109 | G | A | -0.4699 | |
| 110 | Q | A | -1.2482 | |
| 111 | G | A | 0.0000 | |
| 112 | T | A | -0.9082 | |
| 113 | Q | A | -0.9397 | |
| 114 | V | A | 0.0000 | |
| 115 | T | A | -0.2884 | |
| 116 | V | A | 0.0000 | |
| 117 | S | A | -0.8335 | |
| 118 | S | A | -0.9198 |