| Chain sequence(s) |
L: KKYIILQQFGFRD
input PDB |
| Selected Chain(s) | L |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:02)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:02)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with L chain(s) selected (00:00:02)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:02)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:02)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:25)
[INFO] Main: Simulation completed successfully. (00:00:26)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 208 | K | L | -2.0060 | |
| 209 | K | L | -1.7692 | |
| 210 | Y | L | 1.1371 | |
| 211 | I | L | 1.3136 | |
| 212 | I | L | 2.4240 | |
| 213 | L | L | 1.6963 | |
| 214 | Q | L | -1.1058 | |
| 215 | Q | L | -0.9140 | |
| 216 | F | L | 1.6959 | |
| 217 | G | L | 0.4126 | |
| 218 | F | L | 1.7046 | |
| 219 | R | L | -0.9685 | |
| 220 | D | L | -1.9713 |