| Chain sequence(s) |
A: MIKSLFAVIIGGSVGCTLRWLLSTKFNSLFPNLPPGTLVVNLLAGLIIGTALAYFLRQPHLDPFWKLMITTGLCGGLSTFSTFSVEVFALLQAGNYIWALTSVLVHVIGSLIMTALGFFIITILF
C: SVSSVPTKLEVVAATPTSLLISWDAPAVTVIFYVITYGETGGNSPVQEFTVPGSKSTATISGLKPGVDYTITVYATYYASNSGWYEYGSPISINYRT B: MIKSLFAVIIGGSVGCTLRWLLSTKFNSLFPNLPPGTLVVNLLAGLIIGTALAYFLRQPHLDPFWKLMITTGLCGGLSTFSTFSVEVFALLQAGNYIWALTSVLVHVIGSLIMTALGFFIITILF D: SSVPTKLEVVAATPTSLLISWDAPAVTVIFYVITYGETGGNSPVQEFTVPGSKSTATISGLKPGVDYTITVYATYYASNSGWYEYGSPISINYRT input PDB |
| Selected Chain(s) | A,C,B,D |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:38)
[INFO] Main: Simulation completed successfully. (00:02:42)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 1.9884 | |
| 2 | I | A | 2.5461 | |
| 3 | K | A | 0.8513 | |
| 4 | S | A | 1.5212 | |
| 5 | L | A | 2.3132 | |
| 6 | F | A | 2.7332 | |
| 7 | A | A | 0.0000 | |
| 8 | V | A | 0.0000 | |
| 9 | I | A | 2.7091 | |
| 10 | I | A | 2.9317 | |
| 11 | G | A | 0.0000 | |
| 12 | G | A | 0.0000 | |
| 13 | S | A | 2.4248 | |
| 14 | V | A | 2.5771 | |
| 15 | G | A | 0.0000 | |
| 16 | C | A | 0.0000 | |
| 17 | T | A | 1.4426 | |
| 18 | L | A | 1.3027 | |
| 19 | R | A | 0.0000 | |
| 20 | W | A | 0.6790 | |
| 21 | L | A | 0.7396 | |
| 22 | L | A | 0.5731 | |
| 23 | S | A | 0.2112 | |
| 24 | T | A | -0.2619 | |
| 25 | K | A | -0.8270 | |
| 26 | F | A | 0.9139 | |
| 27 | N | A | 0.0000 | |
| 28 | S | A | 1.1404 | |
| 29 | L | A | 2.1998 | |
| 30 | F | A | 1.9691 | |
| 31 | P | A | 0.9420 | |
| 32 | N | A | 0.4148 | |
| 33 | L | A | 0.0000 | |
| 34 | P | A | 0.0000 | |
| 35 | P | A | 0.8455 | |
| 36 | G | A | 0.0000 | |
| 37 | T | A | 0.0000 | |
| 38 | L | A | 0.9096 | |
| 39 | V | A | 1.2147 | |
| 40 | V | A | 0.0000 | |
| 41 | N | A | 0.0000 | |
| 42 | L | A | 1.5505 | |
| 43 | L | A | 1.1952 | |
| 44 | A | A | 0.0000 | |
| 45 | G | A | 0.0000 | |
| 46 | L | A | 1.6973 | |
| 47 | I | A | 1.1042 | |
| 48 | I | A | 0.0000 | |
| 49 | G | A | 0.0000 | |
| 50 | T | A | 1.1428 | |
| 51 | A | A | 0.0000 | |
| 52 | L | A | 0.0000 | |
| 53 | A | A | 0.0000 | |
| 54 | Y | A | 0.4130 | |
| 55 | F | A | 0.0000 | |
| 56 | L | A | 0.0000 | |
| 57 | R | A | -0.6442 | |
| 58 | Q | A | -1.3770 | |
| 59 | P | A | -1.3858 | |
| 60 | H | A | -1.7405 | |
| 61 | L | A | -1.1660 | |
| 62 | D | A | -1.6959 | |
| 63 | P | A | -0.7164 | |
| 64 | F | A | 0.1060 | |
| 65 | W | A | 0.6004 | |
| 66 | K | A | 0.0000 | |
| 67 | L | A | 0.0000 | |
| 68 | M | A | 1.6438 | |
| 69 | I | A | 1.2913 | |
| 70 | T | A | 0.0000 | |
| 71 | T | A | 0.0000 | |
| 72 | G | A | 0.0000 | |
| 73 | L | A | 1.3866 | |
| 74 | C | A | 0.0000 | |
| 75 | G | A | 0.0000 | |
| 76 | G | A | 0.0000 | |
| 77 | L | A | 0.0000 | |
| 78 | S | A | 0.0000 | |
| 79 | T | A | 0.0000 | |
| 80 | F | A | 0.0000 | |
| 81 | S | A | 0.0000 | |
| 82 | T | A | -0.0162 | |
| 83 | F | A | 0.0000 | |
| 84 | S | A | 0.0000 | |
| 85 | V | A | 0.0000 | |
| 86 | E | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | F | A | 0.0000 | |
| 89 | A | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | L | A | 0.9558 | |
| 92 | Q | A | 0.0054 | |
| 93 | A | A | -0.2450 | |
| 94 | G | A | 0.0593 | |
| 95 | N | A | 1.0587 | |
| 96 | Y | A | 2.6597 | |
| 97 | I | A | 3.1802 | |
| 98 | W | A | 2.2255 | |
| 99 | A | A | 0.0000 | |
| 100 | L | A | 2.9950 | |
| 101 | T | A | 2.0339 | |
| 102 | S | A | 0.0000 | |
| 103 | V | A | 1.5541 | |
| 104 | L | A | 2.0453 | |
| 105 | V | A | 1.9902 | |
| 106 | H | A | 0.0000 | |
| 107 | V | A | 0.0000 | |
| 108 | I | A | 2.3611 | |
| 109 | G | A | 1.8576 | |
| 110 | S | A | 0.0000 | |
| 111 | L | A | 1.7928 | |
| 112 | I | A | 2.4577 | |
| 113 | M | A | 2.0416 | |
| 114 | T | A | 0.0000 | |
| 115 | A | A | 1.7075 | |
| 116 | L | A | 2.3879 | |
| 117 | G | A | 0.0000 | |
| 118 | F | A | 0.0000 | |
| 119 | F | A | 3.3002 | |
| 120 | I | A | 3.8675 | |
| 121 | I | A | 3.2741 | |
| 122 | T | A | 3.2464 | |
| 123 | I | A | 4.2683 | |
| 124 | L | A | 4.1240 | |
| 125 | F | A | 3.6484 | |
| 1 | M | B | 1.5807 | |
| 2 | I | B | 1.8435 | |
| 3 | K | B | 0.1237 | |
| 4 | S | B | 1.1137 | |
| 5 | L | B | 1.8791 | |
| 6 | F | B | 2.4804 | |
| 7 | A | B | 0.0000 | |
| 8 | V | B | 0.0000 | |
| 9 | I | B | 2.6980 | |
| 10 | I | B | 2.8140 | |
| 11 | G | B | 0.0000 | |
| 12 | G | B | 0.0000 | |
| 13 | S | B | 2.3660 | |
| 14 | V | B | 2.3601 | |
| 15 | G | B | 0.0000 | |
| 16 | C | B | 0.0000 | |
| 17 | T | B | 1.3957 | |
| 18 | L | B | 1.2226 | |
| 19 | R | B | 0.0000 | |
| 20 | W | B | 0.6512 | |
| 21 | L | B | 0.6953 | |
| 22 | L | B | 0.5411 | |
| 23 | S | B | 0.0000 | |
| 24 | T | B | -0.3731 | |
| 25 | K | B | -0.9247 | |
| 26 | F | B | 0.7850 | |
| 27 | N | B | 0.0000 | |
| 28 | S | B | 0.6280 | |
| 29 | L | B | 1.8544 | |
| 30 | F | B | 1.7364 | |
| 31 | P | B | 0.7532 | |
| 32 | N | B | 0.4269 | |
| 33 | L | B | 0.0000 | |
| 34 | P | B | 0.0000 | |
| 35 | P | B | 0.8324 | |
| 36 | G | B | 0.0000 | |
| 37 | T | B | 0.0000 | |
| 38 | L | B | 1.0125 | |
| 39 | V | B | 1.4391 | |
| 40 | V | B | 0.0000 | |
| 41 | N | B | 0.0000 | |
| 42 | L | B | 1.6257 | |
| 43 | L | B | 1.1605 | |
| 44 | A | B | 0.0000 | |
| 45 | G | B | 0.0000 | |
| 46 | L | B | 1.5196 | |
| 47 | I | B | 0.9484 | |
| 48 | I | B | 0.0000 | |
| 49 | G | B | 0.0000 | |
| 50 | T | B | 1.1158 | |
| 51 | A | B | 0.0000 | |
| 52 | L | B | 0.0000 | |
| 53 | A | B | 0.0000 | |
| 54 | Y | B | 0.5128 | |
| 55 | F | B | 0.0000 | |
| 56 | L | B | 0.0000 | |
| 57 | R | B | -1.6039 | |
| 58 | Q | B | -1.7992 | |
| 59 | P | B | -1.6532 | |
| 60 | H | B | -1.8626 | |
| 61 | L | B | -1.1049 | |
| 62 | D | B | -1.4927 | |
| 63 | P | B | -0.5785 | |
| 64 | F | B | 0.2191 | |
| 65 | W | B | 0.6859 | |
| 66 | K | B | 0.0000 | |
| 67 | L | B | 0.0000 | |
| 68 | M | B | 1.5429 | |
| 69 | I | B | 0.8679 | |
| 70 | T | B | 0.0000 | |
| 71 | T | B | 0.3059 | |
| 72 | G | B | 0.0000 | |
| 73 | L | B | 1.2011 | |
| 74 | C | B | 0.0000 | |
| 75 | G | B | 0.0000 | |
| 76 | G | B | 0.0000 | |
| 77 | L | B | 0.0000 | |
| 78 | S | B | 0.0000 | |
| 79 | T | B | 0.0000 | |
| 80 | F | B | 0.0000 | |
| 81 | S | B | 0.0000 | |
| 82 | T | B | 0.0000 | |
| 83 | F | B | 0.0000 | |
| 84 | S | B | 0.0000 | |
| 85 | V | B | 0.0000 | |
| 86 | E | B | 0.0000 | |
| 87 | V | B | 0.0000 | |
| 88 | F | B | 0.0000 | |
| 89 | A | B | 0.0000 | |
| 90 | L | B | 0.0000 | |
| 91 | L | B | 0.9889 | |
| 92 | Q | B | 0.0417 | |
| 93 | A | B | -0.2641 | |
| 94 | G | B | 0.0448 | |
| 95 | N | B | 1.0821 | |
| 96 | Y | B | 2.6838 | |
| 97 | I | B | 3.1866 | |
| 98 | W | B | 2.2404 | |
| 99 | A | B | 0.0000 | |
| 100 | L | B | 3.0114 | |
| 101 | T | B | 2.0403 | |
| 102 | S | B | 0.0000 | |
| 103 | V | B | 1.5869 | |
| 104 | L | B | 2.0574 | |
| 105 | V | B | 1.8023 | |
| 106 | H | B | 0.0000 | |
| 107 | V | B | 0.0000 | |
| 108 | I | B | 2.4868 | |
| 109 | G | B | 2.0283 | |
| 110 | S | B | 0.0000 | |
| 111 | L | B | 2.0401 | |
| 112 | I | B | 2.8902 | |
| 113 | M | B | 2.2164 | |
| 114 | T | B | 0.0000 | |
| 115 | A | B | 1.7987 | |
| 116 | L | B | 2.3850 | |
| 117 | G | B | 0.0000 | |
| 118 | F | B | 0.0000 | |
| 119 | F | B | 3.0754 | |
| 120 | I | B | 3.3320 | |
| 121 | I | B | 3.0273 | |
| 122 | T | B | 2.9736 | |
| 123 | I | B | 4.0895 | |
| 124 | L | B | 4.0758 | |
| 125 | F | B | 3.3511 | |
| 1 | S | C | 0.7942 | |
| 2 | V | C | 1.9728 | |
| 3 | S | C | 0.8720 | |
| 4 | S | C | 0.6556 | |
| 5 | V | C | 0.6325 | |
| 6 | P | C | 0.0000 | |
| 7 | T | C | -1.4960 | |
| 8 | K | C | -2.5529 | |
| 9 | L | C | 0.0000 | |
| 10 | E | C | -1.8212 | |
| 11 | V | C | 0.1569 | |
| 12 | V | C | 1.5586 | |
| 13 | A | C | 0.9352 | |
| 14 | A | C | 0.5144 | |
| 15 | T | C | -0.2104 | |
| 16 | P | C | -1.0650 | |
| 17 | T | C | -0.8859 | |
| 18 | S | C | -0.4390 | |
| 19 | L | C | 0.0000 | |
| 20 | L | C | 0.8464 | |
| 21 | I | C | 0.0000 | |
| 22 | S | C | -0.9641 | |
| 23 | W | C | 0.0000 | |
| 24 | D | C | -2.5813 | |
| 25 | A | C | -1.2043 | |
| 26 | P | C | 0.0000 | |
| 27 | A | C | 0.5638 | |
| 28 | V | C | 0.0000 | |
| 29 | T | C | 0.0000 | |
| 30 | V | C | 0.0000 | |
| 31 | I | C | 0.0000 | |
| 32 | F | C | 0.1369 | |
| 33 | Y | C | 0.0000 | |
| 34 | V | C | 0.0000 | |
| 35 | I | C | 0.0000 | |
| 36 | T | C | -0.5975 | |
| 37 | Y | C | -0.3563 | |
| 38 | G | C | -0.5377 | |
| 39 | E | C | -1.2273 | |
| 40 | T | C | -1.0249 | |
| 41 | G | C | -1.2513 | |
| 42 | G | C | -1.1831 | |
| 43 | N | C | -1.5845 | |
| 44 | S | C | -0.7878 | |
| 45 | P | C | -0.2627 | |
| 46 | V | C | 0.3855 | |
| 47 | Q | C | -1.1229 | |
| 48 | E | C | -1.7166 | |
| 49 | F | C | -0.5370 | |
| 50 | T | C | 0.0112 | |
| 51 | V | C | -0.1685 | |
| 52 | P | C | -0.6660 | |
| 53 | G | C | -0.6606 | |
| 54 | S | C | -1.1775 | |
| 55 | K | C | -2.0490 | |
| 56 | S | C | -1.4065 | |
| 57 | T | C | -0.7519 | |
| 58 | A | C | 0.0000 | |
| 59 | T | C | 0.1508 | |
| 60 | I | C | 0.0000 | |
| 61 | S | C | -0.6023 | |
| 62 | G | C | -0.9808 | |
| 63 | L | C | 0.0000 | |
| 64 | K | C | -1.9640 | |
| 65 | P | C | -1.5622 | |
| 66 | G | C | -1.3801 | |
| 67 | V | C | -1.2107 | |
| 68 | D | C | -1.8076 | |
| 69 | Y | C | 0.0000 | |
| 70 | T | C | -0.6573 | |
| 71 | I | C | 0.0000 | |
| 72 | T | C | -0.3025 | |
| 73 | V | C | 0.0000 | |
| 74 | Y | C | 0.4522 | |
| 75 | A | C | 0.0000 | |
| 76 | T | C | 0.0000 | |
| 77 | Y | C | 0.1564 | |
| 78 | Y | C | 0.0000 | |
| 79 | A | C | 0.0000 | |
| 80 | S | C | 0.0000 | |
| 81 | N | C | -0.3371 | |
| 82 | S | C | -0.5528 | |
| 83 | G | C | 0.0000 | |
| 84 | W | C | 0.0000 | |
| 85 | Y | C | 0.0000 | |
| 86 | E | C | -0.6091 | |
| 87 | Y | C | 0.0451 | |
| 88 | G | C | 0.0770 | |
| 89 | S | C | 0.0236 | |
| 90 | P | C | 0.1593 | |
| 91 | I | C | 0.1429 | |
| 92 | S | C | -0.5711 | |
| 93 | I | C | -0.6969 | |
| 94 | N | C | -1.6423 | |
| 95 | Y | C | -1.3604 | |
| 96 | R | C | -2.4075 | |
| 97 | T | C | -1.4641 | |
| 3 | S | D | -0.0468 | |
| 4 | S | D | 0.2095 | |
| 5 | V | D | 0.2414 | |
| 6 | P | D | 0.0000 | |
| 7 | T | D | -1.4894 | |
| 8 | K | D | -2.5280 | |
| 9 | L | D | 0.0000 | |
| 10 | E | D | -1.7806 | |
| 11 | V | D | 0.2555 | |
| 12 | V | D | 1.6040 | |
| 13 | A | D | 0.9491 | |
| 14 | A | D | 0.5164 | |
| 15 | T | D | -0.2063 | |
| 16 | P | D | -1.0894 | |
| 17 | T | D | -0.9845 | |
| 18 | S | D | -0.4870 | |
| 19 | L | D | 0.0000 | |
| 20 | L | D | 0.8797 | |
| 21 | I | D | 0.0000 | |
| 22 | S | D | -0.9180 | |
| 23 | W | D | 0.0000 | |
| 24 | D | D | -2.5963 | |
| 25 | A | D | -1.1689 | |
| 26 | P | D | -0.1778 | |
| 27 | A | D | 0.2716 | |
| 28 | V | D | 0.5457 | |
| 29 | T | D | 0.0000 | |
| 30 | V | D | 0.0000 | |
| 31 | I | D | 0.0000 | |
| 32 | F | D | 0.1686 | |
| 33 | Y | D | 0.0000 | |
| 34 | V | D | 0.0000 | |
| 35 | I | D | 0.0000 | |
| 36 | T | D | -0.5812 | |
| 37 | Y | D | -0.3573 | |
| 38 | G | D | 0.0000 | |
| 39 | E | D | -1.3684 | |
| 40 | T | D | -1.0990 | |
| 41 | G | D | -1.2913 | |
| 42 | G | D | -1.2517 | |
| 43 | N | D | -1.6064 | |
| 44 | S | D | -0.8680 | |
| 45 | P | D | -0.3236 | |
| 46 | V | D | 0.3396 | |
| 47 | Q | D | -1.1698 | |
| 48 | E | D | -1.7166 | |
| 49 | F | D | -0.5356 | |
| 50 | T | D | 0.0287 | |
| 51 | V | D | -0.1346 | |
| 52 | P | D | -0.5677 | |
| 53 | G | D | -0.6411 | |
| 54 | S | D | -1.1672 | |
| 55 | K | D | -2.0373 | |
| 56 | S | D | -1.4067 | |
| 57 | T | D | -0.7299 | |
| 58 | A | D | 0.0000 | |
| 59 | T | D | 0.1676 | |
| 60 | I | D | 0.0000 | |
| 61 | S | D | -0.6463 | |
| 62 | G | D | -1.0663 | |
| 63 | L | D | 0.0000 | |
| 64 | K | D | -2.3043 | |
| 65 | P | D | -1.6259 | |
| 66 | G | D | -1.3422 | |
| 67 | V | D | -1.2869 | |
| 68 | D | D | -1.7616 | |
| 69 | Y | D | 0.0000 | |
| 70 | T | D | -0.6722 | |
| 71 | I | D | 0.0000 | |
| 72 | T | D | -0.4529 | |
| 73 | V | D | 0.0000 | |
| 74 | Y | D | 0.4491 | |
| 75 | A | D | 0.0000 | |
| 76 | T | D | 0.0000 | |
| 77 | Y | D | 0.2830 | |
| 78 | Y | D | 0.0000 | |
| 79 | A | D | 0.0000 | |
| 80 | S | D | 0.0000 | |
| 81 | N | D | -0.4795 | |
| 82 | S | D | -0.6245 | |
| 83 | G | D | -0.2259 | |
| 84 | W | D | 0.0000 | |
| 85 | Y | D | 0.0000 | |
| 86 | E | D | -0.4717 | |
| 87 | Y | D | 0.2669 | |
| 88 | G | D | 0.0000 | |
| 89 | S | D | 0.0224 | |
| 90 | P | D | 0.1063 | |
| 91 | I | D | 0.1243 | |
| 92 | S | D | -0.5510 | |
| 93 | I | D | -0.7312 | |
| 94 | N | D | -1.6665 | |
| 95 | Y | D | -1.3679 | |
| 96 | R | D | -2.3804 | |
| 97 | T | D | -1.5693 |