| Chain sequence(s) |
A: MKKKIISAILMSTVILSAAAPLSGASAACTGSTQHQCGEAEAKPQGIWGGEKGEAEAKGPLGGQPR
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:06)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:06)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:06)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:06)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:06)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:55)
[INFO] Main: Simulation completed successfully. (00:00:56)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | -0.5048 | |
| 2 | K | A | -2.1092 | |
| 3 | K | A | -2.5531 | |
| 4 | K | A | -1.9203 | |
| 5 | I | A | 0.1045 | |
| 6 | I | A | 0.8513 | |
| 7 | S | A | 0.5470 | |
| 8 | A | A | 1.4522 | |
| 9 | I | A | 3.2342 | |
| 10 | L | A | 3.8185 | |
| 11 | M | A | 3.6423 | |
| 12 | S | A | 3.0323 | |
| 13 | T | A | 3.1412 | |
| 14 | V | A | 4.0544 | |
| 15 | I | A | 3.9370 | |
| 16 | L | A | 3.0532 | |
| 17 | S | A | 1.9004 | |
| 18 | A | A | 1.8002 | |
| 19 | A | A | 1.5814 | |
| 20 | A | A | 0.8387 | |
| 21 | P | A | 0.4394 | |
| 22 | L | A | 1.1795 | |
| 23 | S | A | 0.2530 | |
| 24 | G | A | -0.0264 | |
| 25 | A | A | 0.3415 | |
| 26 | S | A | 0.2049 | |
| 27 | A | A | 0.1347 | |
| 28 | A | A | -0.0150 | |
| 29 | C | A | 0.2095 | |
| 30 | T | A | -0.4062 | |
| 31 | G | A | -0.8844 | |
| 32 | S | A | -1.0880 | |
| 33 | T | A | -1.4527 | |
| 34 | Q | A | -2.3012 | |
| 35 | H | A | -2.8341 | |
| 36 | Q | A | -2.8953 | |
| 37 | C | A | -2.1308 | |
| 38 | G | A | -2.8254 | |
| 39 | E | A | -3.5249 | |
| 40 | A | A | -2.6969 | |
| 41 | E | A | -3.3610 | |
| 42 | A | A | -2.6145 | |
| 43 | K | A | -3.2235 | |
| 44 | P | A | -1.7594 | |
| 45 | Q | A | -1.7630 | |
| 46 | G | A | -0.1609 | |
| 47 | I | A | 1.8603 | |
| 48 | W | A | 1.3015 | |
| 49 | G | A | -0.6027 | |
| 50 | G | A | -1.4798 | |
| 51 | E | A | -3.2889 | |
| 52 | K | A | -3.4055 | |
| 53 | G | A | -3.1642 | |
| 54 | E | A | -3.0968 | |
| 55 | A | A | -1.8449 | |
| 56 | E | A | -2.6116 | |
| 57 | A | A | -1.9867 | |
| 58 | K | A | -2.3379 | |
| 59 | G | A | -1.1432 | |
| 60 | P | A | -0.1661 | |
| 61 | L | A | 1.0014 | |
| 62 | G | A | -0.2589 | |
| 63 | G | A | -1.2553 | |
| 64 | Q | A | -2.1077 | |
| 65 | P | A | -1.9063 | |
| 66 | R | A | -2.3174 |