| Chain sequence(s) |
A: RADARADARADARADA
C: RADARADARADARADA B: RADARADARADARADA E: RADARADARADARADA D: RADARADARADARADA G: RADARADARADARADA F: RADARADARADARADA I: RADARADARADARADA H: RADARADARADARADA K: RADARADARADARADA J: RADARADARADARADA M: RADARADARADARADA L: RADARADARADARADA O: RADARADARADARADA N: RADARADARADARADA Q: RADARADARADARADA P: RADARADARADARADA S: RADARADARADARADA R: RADARADARADARADA T: RADARADARADARADA input PDB |
| Selected Chain(s) | A,C,B,E,D,G,F,I,H,K,J,M,L,O,N,Q,P,S,R,T |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:08:52)
[INFO] Main: Simulation completed successfully. (00:08:59)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | R | A | -2.7068 | |
| 2 | A | A | -1.8751 | |
| 3 | D | A | -2.2057 | |
| 4 | A | A | -1.9994 | |
| 5 | R | A | -1.9982 | |
| 6 | A | A | -1.7374 | |
| 7 | D | A | -1.8895 | |
| 8 | A | A | -1.6590 | |
| 9 | R | A | -2.3457 | |
| 10 | A | A | -2.2438 | |
| 11 | D | A | -2.3486 | |
| 12 | A | A | -2.2085 | |
| 13 | R | A | -2.8375 | |
| 14 | A | A | -2.3920 | |
| 15 | D | A | -2.5582 | |
| 16 | A | A | -1.4816 | |
| 1 | R | B | -2.5759 | |
| 2 | A | B | -1.7728 | |
| 3 | D | B | -1.9449 | |
| 4 | A | B | -1.8880 | |
| 5 | R | B | -1.9167 | |
| 6 | A | B | 0.0000 | |
| 7 | D | B | -1.8739 | |
| 8 | A | B | -1.7275 | |
| 9 | R | B | -2.4391 | |
| 10 | A | B | 0.0000 | |
| 11 | D | B | -2.3742 | |
| 12 | A | B | -2.1811 | |
| 13 | R | B | -3.0277 | |
| 14 | A | B | -2.4303 | |
| 15 | D | B | -2.7524 | |
| 16 | A | B | -1.4870 | |
| 1 | R | C | -2.5815 | |
| 2 | A | C | -1.7766 | |
| 3 | D | C | -1.9756 | |
| 4 | A | C | -1.9195 | |
| 5 | R | C | -1.9513 | |
| 6 | A | C | 0.0000 | |
| 7 | D | C | -1.9207 | |
| 8 | A | C | -1.6865 | |
| 9 | R | C | -2.5276 | |
| 10 | A | C | 0.0000 | |
| 11 | D | C | -2.4225 | |
| 12 | A | C | -2.2213 | |
| 13 | R | C | -3.0505 | |
| 14 | A | C | -2.4555 | |
| 15 | D | C | -2.7595 | |
| 16 | A | C | -1.4834 | |
| 1 | R | D | -2.5711 | |
| 2 | A | D | -1.7542 | |
| 3 | D | D | -1.9698 | |
| 4 | A | D | -1.9199 | |
| 5 | R | D | -1.9595 | |
| 6 | A | D | 0.0000 | |
| 7 | D | D | -1.9443 | |
| 8 | A | D | -1.6998 | |
| 9 | R | D | -2.5764 | |
| 10 | A | D | 0.0000 | |
| 11 | D | D | -2.4125 | |
| 12 | A | D | -2.2054 | |
| 13 | R | D | -3.0471 | |
| 14 | A | D | -2.4594 | |
| 15 | D | D | -2.7538 | |
| 16 | A | D | -1.4720 | |
| 1 | R | E | -2.5600 | |
| 2 | A | E | -1.7631 | |
| 3 | D | E | -1.9450 | |
| 4 | A | E | -1.9067 | |
| 5 | R | E | -1.9351 | |
| 6 | A | E | 0.0000 | |
| 7 | D | E | -1.9556 | |
| 8 | A | E | -1.6778 | |
| 9 | R | E | -2.5202 | |
| 10 | A | E | 0.0000 | |
| 11 | D | E | -2.4044 | |
| 12 | A | E | -2.1949 | |
| 13 | R | E | -3.0241 | |
| 14 | A | E | -2.4449 | |
| 15 | D | E | -2.7405 | |
| 16 | A | E | -1.4697 | |
| 1 | R | F | -2.5422 | |
| 2 | A | F | -1.7247 | |
| 3 | D | F | -1.8696 | |
| 4 | A | F | -1.8530 | |
| 5 | R | F | -1.9314 | |
| 6 | A | F | 0.0000 | |
| 7 | D | F | -1.9141 | |
| 8 | A | F | -1.6269 | |
| 9 | R | F | -2.4832 | |
| 10 | A | F | 0.0000 | |
| 11 | D | F | -2.3469 | |
| 12 | A | F | -2.1781 | |
| 13 | R | F | -3.0194 | |
| 14 | A | F | -2.4379 | |
| 15 | D | F | -2.7510 | |
| 16 | A | F | -1.4523 | |
| 1 | R | G | -2.5692 | |
| 2 | A | G | -1.7453 | |
| 3 | D | G | -1.8395 | |
| 4 | A | G | -1.8606 | |
| 5 | R | G | -1.9413 | |
| 6 | A | G | 0.0000 | |
| 7 | D | G | -1.8968 | |
| 8 | A | G | -1.5979 | |
| 9 | R | G | -2.4106 | |
| 10 | A | G | 0.0000 | |
| 11 | D | G | -2.3256 | |
| 12 | A | G | -2.1590 | |
| 13 | R | G | -2.9996 | |
| 14 | A | G | -2.4355 | |
| 15 | D | G | -2.7345 | |
| 16 | A | G | -1.4699 | |
| 1 | R | H | -2.5568 | |
| 2 | A | H | -1.7216 | |
| 3 | D | H | -1.8293 | |
| 4 | A | H | -1.8513 | |
| 5 | R | H | -1.9074 | |
| 6 | A | H | 0.0000 | |
| 7 | D | H | -1.8727 | |
| 8 | A | H | -1.6021 | |
| 9 | R | H | -2.3901 | |
| 10 | A | H | 0.0000 | |
| 11 | D | H | -2.3606 | |
| 12 | A | H | -2.1493 | |
| 13 | R | H | -3.0102 | |
| 14 | A | H | -2.4379 | |
| 15 | D | H | -2.7470 | |
| 16 | A | H | -1.4749 | |
| 1 | R | I | -2.3642 | |
| 2 | A | I | -1.7199 | |
| 3 | D | I | -1.8043 | |
| 4 | A | I | -1.8441 | |
| 5 | R | I | -1.9319 | |
| 6 | A | I | 0.0000 | |
| 7 | D | I | -1.8780 | |
| 8 | A | I | -1.6391 | |
| 9 | R | I | -2.4618 | |
| 10 | A | I | 0.0000 | |
| 11 | D | I | -2.3464 | |
| 12 | A | I | -2.1853 | |
| 13 | R | I | -3.0222 | |
| 14 | A | I | -2.4159 | |
| 15 | D | I | -2.7446 | |
| 16 | A | I | -1.4720 | |
| 1 | R | J | -2.3452 | |
| 2 | A | J | -1.7308 | |
| 3 | D | J | -1.8254 | |
| 4 | A | J | -1.8342 | |
| 5 | R | J | -1.8956 | |
| 6 | A | J | 0.0000 | |
| 7 | D | J | -1.8730 | |
| 8 | A | J | -1.6632 | |
| 9 | R | J | -2.5173 | |
| 10 | A | J | 0.0000 | |
| 11 | D | J | -2.3478 | |
| 12 | A | J | -2.2104 | |
| 13 | R | J | -2.8554 | |
| 14 | A | J | -2.4086 | |
| 15 | D | J | -2.7419 | |
| 16 | A | J | -1.4807 | |
| 1 | R | K | -2.5987 | |
| 2 | A | K | -1.7942 | |
| 3 | D | K | -1.9679 | |
| 4 | A | K | -1.9114 | |
| 5 | R | K | -1.9175 | |
| 6 | A | K | 0.0000 | |
| 7 | D | K | -1.9167 | |
| 8 | A | K | -1.6648 | |
| 9 | R | K | -2.5596 | |
| 10 | A | K | 0.0000 | |
| 11 | D | K | -2.3586 | |
| 12 | A | K | -2.2324 | |
| 13 | R | K | -2.8581 | |
| 14 | A | K | -2.4065 | |
| 15 | D | K | -2.7498 | |
| 16 | A | K | -1.4869 | |
| 1 | R | L | -2.5637 | |
| 2 | A | L | -1.7660 | |
| 3 | D | L | -1.9038 | |
| 4 | A | L | -1.8577 | |
| 5 | R | L | -2.0477 | |
| 6 | A | L | 0.0000 | |
| 7 | D | L | -1.8599 | |
| 8 | A | L | -1.4988 | |
| 9 | R | L | -2.2975 | |
| 10 | A | L | 0.0000 | |
| 11 | D | L | -2.3255 | |
| 12 | A | L | -2.1008 | |
| 13 | R | L | -2.9933 | |
| 14 | A | L | -2.4084 | |
| 15 | D | L | -2.7252 | |
| 16 | A | L | -1.4763 | |
| 1 | R | M | -2.5357 | |
| 2 | A | M | -1.6945 | |
| 3 | D | M | -1.8281 | |
| 4 | A | M | -1.6959 | |
| 5 | R | M | -1.8316 | |
| 6 | A | M | 0.0000 | |
| 7 | D | M | 0.0000 | |
| 8 | A | M | -1.3181 | |
| 9 | R | M | -2.0946 | |
| 10 | A | M | 0.0000 | |
| 11 | D | M | -2.1830 | |
| 12 | A | M | -2.0100 | |
| 13 | R | M | -2.9863 | |
| 14 | A | M | -2.3844 | |
| 15 | D | M | -2.7031 | |
| 16 | A | M | -1.4594 | |
| 1 | R | N | -2.3796 | |
| 2 | A | N | -1.7216 | |
| 3 | D | N | -1.7492 | |
| 4 | A | N | -1.6466 | |
| 5 | R | N | -1.7989 | |
| 6 | A | N | 0.0000 | |
| 7 | D | N | -1.5960 | |
| 8 | A | N | -1.5955 | |
| 9 | R | N | -2.1504 | |
| 10 | A | N | 0.0000 | |
| 11 | D | N | -2.0739 | |
| 12 | A | N | -2.0887 | |
| 13 | R | N | -2.8243 | |
| 14 | A | N | -2.2976 | |
| 15 | D | N | -2.6437 | |
| 16 | A | N | -1.3903 | |
| 1 | R | O | -2.5054 | |
| 2 | A | O | -2.0648 | |
| 3 | D | O | -2.3652 | |
| 4 | A | O | -2.1567 | |
| 5 | R | O | -3.0693 | |
| 6 | A | O | -2.4246 | |
| 7 | D | O | -2.4534 | |
| 8 | A | O | -2.0852 | |
| 9 | R | O | -2.9731 | |
| 10 | A | O | 0.0000 | |
| 11 | D | O | -2.5582 | |
| 12 | A | O | -2.3044 | |
| 13 | R | O | -3.1711 | |
| 14 | A | O | -2.4893 | |
| 15 | D | O | -2.4435 | |
| 16 | A | O | -1.4535 | |
| 1 | R | P | -3.1055 | |
| 2 | A | P | -2.5538 | |
| 3 | D | P | -3.6055 | |
| 4 | A | P | -3.2465 | |
| 5 | R | P | -4.1112 | |
| 6 | A | P | -3.4629 | |
| 7 | D | P | -4.2490 | |
| 8 | A | P | -3.4435 | |
| 9 | R | P | -4.2690 | |
| 10 | A | P | -3.4645 | |
| 11 | D | P | -4.0125 | |
| 12 | A | P | -3.2395 | |
| 13 | R | P | -3.5880 | |
| 14 | A | P | -2.5256 | |
| 15 | D | P | -3.0185 | |
| 16 | A | P | -1.6399 | |
| 1 | R | Q | -2.8309 | |
| 2 | A | Q | -2.1637 | |
| 3 | D | Q | -3.0494 | |
| 4 | A | Q | -2.5522 | |
| 5 | R | Q | -2.5558 | |
| 6 | A | Q | -2.4621 | |
| 7 | D | Q | -3.4083 | |
| 8 | A | Q | -2.6630 | |
| 9 | R | Q | -2.8540 | |
| 10 | A | Q | -2.6650 | |
| 11 | D | Q | -3.4438 | |
| 12 | A | Q | -2.9615 | |
| 13 | R | Q | -3.3387 | |
| 14 | A | Q | -2.3660 | |
| 15 | D | Q | -2.8588 | |
| 16 | A | Q | -1.6267 | |
| 1 | R | R | -2.2554 | |
| 2 | A | R | -1.7248 | |
| 3 | D | R | -1.8847 | |
| 4 | A | R | -1.7567 | |
| 5 | R | R | -1.9039 | |
| 6 | A | R | -1.7648 | |
| 7 | D | R | -1.5880 | |
| 8 | A | R | -1.8913 | |
| 9 | R | R | -2.3984 | |
| 10 | A | R | -2.4948 | |
| 11 | D | R | -2.7684 | |
| 12 | A | R | -2.6300 | |
| 13 | R | R | -3.0911 | |
| 14 | A | R | -2.4343 | |
| 15 | D | R | -2.6052 | |
| 16 | A | R | -1.5252 | |
| 1 | R | S | -2.7918 | |
| 2 | A | S | -2.0387 | |
| 3 | D | S | -2.5131 | |
| 4 | A | S | -2.1279 | |
| 5 | R | S | -2.0853 | |
| 6 | A | S | -2.1409 | |
| 7 | D | S | -1.8754 | |
| 8 | A | S | -1.6901 | |
| 9 | R | S | -2.3039 | |
| 10 | A | S | -2.3211 | |
| 11 | D | S | -2.4624 | |
| 12 | A | S | -2.2471 | |
| 13 | R | S | -2.8813 | |
| 14 | A | S | -2.4400 | |
| 15 | D | S | -2.5894 | |
| 16 | A | S | -1.4966 | |
| 1 | R | T | -2.1502 | |
| 2 | A | T | -1.7529 | |
| 3 | D | T | -1.9198 | |
| 4 | A | T | -1.7002 | |
| 5 | R | T | -1.8691 | |
| 6 | A | T | 0.0000 | |
| 7 | D | T | -1.4776 | |
| 8 | A | T | -1.5855 | |
| 9 | R | T | -2.2983 | |
| 10 | A | T | 0.0000 | |
| 11 | D | T | -2.3529 | |
| 12 | A | T | -2.2527 | |
| 13 | R | T | -3.0543 | |
| 14 | A | T | -2.4126 | |
| 15 | D | T | -2.7465 | |
| 16 | A | T | -1.4705 |