| Chain sequence(s) |
A: SVGDVLGGLAGVPGLLRHRCASALDVVYTLLNENPGSRAMRMAERDAPEAFLTIVEVAVLGVATLGILWCFVARTSVSRMFLGTVVLFAALFLLWIGGVDYGHMAGIALIFYTLLTVLQPEPGKQRSSDDNRLAYFLLGLFSLAGLVTAKEAQILLDNITTLRGPVATFYGPEQVKMPEVAGHYRLNEEKRKHFRHLMTQCDFTPWLAWHVATNTSNVLDRSWTWQGPEENAIDGADGDLVRFKTPGGSERVLQPVWKDCRMFREGRDVKDFILYASGRR
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:10)
[INFO] Main: Simulation completed successfully. (00:03:12)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | S | A | 0.4405 | |
| 2 | V | A | 1.8061 | |
| 3 | G | A | 0.5233 | |
| 4 | D | A | -0.2539 | |
| 5 | V | A | 2.1461 | |
| 6 | L | A | 2.2285 | |
| 7 | G | A | 0.6002 | |
| 8 | G | A | 0.7375 | |
| 9 | L | A | 2.0722 | |
| 10 | A | A | 1.1942 | |
| 11 | G | A | 0.8670 | |
| 12 | V | A | 1.6915 | |
| 13 | P | A | 1.0624 | |
| 14 | G | A | 0.3577 | |
| 15 | L | A | 0.9445 | |
| 16 | L | A | 0.0000 | |
| 17 | R | A | -0.8432 | |
| 18 | H | A | -1.2314 | |
| 19 | R | A | -1.1681 | |
| 20 | C | A | -0.2172 | |
| 21 | A | A | -0.9613 | |
| 22 | S | A | -1.2567 | |
| 23 | A | A | 0.0000 | |
| 24 | L | A | 0.6555 | |
| 25 | D | A | -0.6654 | |
| 26 | V | A | -0.1142 | |
| 27 | V | A | 1.0801 | |
| 28 | Y | A | 1.2272 | |
| 29 | T | A | 0.0722 | |
| 30 | L | A | 0.4470 | |
| 31 | L | A | 1.0327 | |
| 32 | N | A | -0.8302 | |
| 33 | E | A | -1.8849 | |
| 34 | N | A | -2.2640 | |
| 35 | P | A | -1.6507 | |
| 36 | G | A | -1.7089 | |
| 37 | S | A | -1.8837 | |
| 38 | R | A | -2.3190 | |
| 39 | A | A | -1.4055 | |
| 40 | M | A | 0.0000 | |
| 41 | R | A | -2.1924 | |
| 42 | M | A | -1.1961 | |
| 43 | A | A | 0.0000 | |
| 44 | E | A | -2.3848 | |
| 45 | R | A | -3.2900 | |
| 46 | D | A | -2.9170 | |
| 47 | A | A | 0.0000 | |
| 48 | P | A | -1.0934 | |
| 49 | E | A | -1.3170 | |
| 50 | A | A | 0.0000 | |
| 51 | F | A | 2.4980 | |
| 52 | L | A | 2.4564 | |
| 53 | T | A | 0.0000 | |
| 54 | I | A | 2.7093 | |
| 55 | V | A | 3.3776 | |
| 56 | E | A | 2.1551 | |
| 57 | V | A | 2.0576 | |
| 58 | A | A | 2.6469 | |
| 59 | V | A | 3.3349 | |
| 60 | L | A | 2.8710 | |
| 61 | G | A | 3.0876 | |
| 62 | V | A | 3.5369 | |
| 63 | A | A | 2.3287 | |
| 64 | T | A | 2.4568 | |
| 65 | L | A | 3.0967 | |
| 66 | G | A | 3.0217 | |
| 67 | I | A | 3.4824 | |
| 68 | L | A | 3.0586 | |
| 69 | W | A | 2.6857 | |
| 70 | C | A | 2.0667 | |
| 71 | F | A | 2.2649 | |
| 72 | V | A | 0.0000 | |
| 73 | A | A | -0.0009 | |
| 74 | R | A | -1.0865 | |
| 75 | T | A | -0.2634 | |
| 76 | S | A | -0.1603 | |
| 77 | V | A | 1.0290 | |
| 78 | S | A | 0.3920 | |
| 79 | R | A | -0.1201 | |
| 80 | M | A | 1.1901 | |
| 81 | F | A | 2.7939 | |
| 82 | L | A | 2.8430 | |
| 83 | G | A | 2.3256 | |
| 84 | T | A | 2.7147 | |
| 85 | V | A | 3.2089 | |
| 86 | V | A | 3.3677 | |
| 87 | L | A | 0.0000 | |
| 88 | F | A | 3.7483 | |
| 89 | A | A | 3.0813 | |
| 90 | A | A | 2.8185 | |
| 91 | L | A | 3.6915 | |
| 92 | F | A | 4.4964 | |
| 93 | L | A | 3.9998 | |
| 94 | L | A | 2.9443 | |
| 95 | W | A | 3.3689 | |
| 96 | I | A | 3.4906 | |
| 97 | G | A | 1.4831 | |
| 98 | G | A | 0.6478 | |
| 99 | V | A | 0.4235 | |
| 100 | D | A | -1.2269 | |
| 101 | Y | A | 0.3308 | |
| 102 | G | A | -0.7170 | |
| 103 | H | A | -0.8865 | |
| 104 | M | A | 0.5765 | |
| 105 | A | A | 0.5317 | |
| 106 | G | A | 0.9733 | |
| 107 | I | A | 1.7820 | |
| 108 | A | A | 2.2343 | |
| 109 | L | A | 2.9938 | |
| 110 | I | A | 3.1885 | |
| 111 | F | A | 2.8103 | |
| 112 | Y | A | 2.9421 | |
| 113 | T | A | 2.0786 | |
| 114 | L | A | 2.0132 | |
| 115 | L | A | 1.2704 | |
| 116 | T | A | 0.4113 | |
| 117 | V | A | 0.5080 | |
| 118 | L | A | 0.6435 | |
| 119 | Q | A | -0.7768 | |
| 120 | P | A | -1.7688 | |
| 121 | E | A | -2.4701 | |
| 122 | P | A | -2.0894 | |
| 123 | G | A | -2.0733 | |
| 124 | K | A | -3.0751 | |
| 125 | Q | A | -2.6208 | |
| 126 | R | A | -2.4617 | |
| 127 | S | A | -2.1407 | |
| 128 | S | A | -2.1247 | |
| 129 | D | A | -2.8604 | |
| 130 | D | A | -1.9311 | |
| 131 | N | A | -1.4804 | |
| 132 | R | A | -1.5567 | |
| 133 | L | A | 0.2626 | |
| 134 | A | A | 0.0000 | |
| 135 | Y | A | 2.0644 | |
| 136 | F | A | 2.7886 | |
| 137 | L | A | 0.0000 | |
| 138 | L | A | 2.7408 | |
| 139 | G | A | 2.3754 | |
| 140 | L | A | 2.6563 | |
| 141 | F | A | 2.5611 | |
| 142 | S | A | 2.0391 | |
| 143 | L | A | 2.8285 | |
| 144 | A | A | 2.0371 | |
| 145 | G | A | 1.3255 | |
| 146 | L | A | 2.1144 | |
| 147 | V | A | 2.0936 | |
| 148 | T | A | 0.8096 | |
| 149 | A | A | 0.1573 | |
| 150 | K | A | -0.0996 | |
| 151 | E | A | 0.0000 | |
| 152 | A | A | 0.4688 | |
| 153 | Q | A | 0.0000 | |
| 154 | I | A | 0.0000 | |
| 155 | L | A | 0.5979 | |
| 156 | L | A | 0.9098 | |
| 157 | D | A | 0.0000 | |
| 158 | N | A | 0.0000 | |
| 159 | I | A | 1.5874 | |
| 160 | T | A | 0.7937 | |
| 161 | T | A | 0.5964 | |
| 162 | L | A | 0.7959 | |
| 163 | R | A | -1.0899 | |
| 164 | G | A | -0.4190 | |
| 165 | P | A | 0.0709 | |
| 166 | V | A | 0.8103 | |
| 167 | A | A | 0.7895 | |
| 168 | T | A | 0.5523 | |
| 169 | F | A | 0.1815 | |
| 170 | Y | A | 0.7911 | |
| 171 | G | A | -0.1739 | |
| 172 | P | A | -0.6144 | |
| 173 | E | A | -1.0507 | |
| 174 | Q | A | -0.6769 | |
| 175 | V | A | 0.2676 | |
| 176 | K | A | -1.3430 | |
| 177 | M | A | -0.4608 | |
| 178 | P | A | -0.3529 | |
| 179 | E | A | -0.4718 | |
| 180 | V | A | 1.0378 | |
| 181 | A | A | 0.4358 | |
| 182 | G | A | -0.1965 | |
| 183 | H | A | -0.7774 | |
| 184 | Y | A | 0.0000 | |
| 185 | R | A | -1.3171 | |
| 186 | L | A | 0.0000 | |
| 187 | N | A | -3.0974 | |
| 188 | E | A | -3.9590 | |
| 189 | E | A | -3.9734 | |
| 190 | K | A | -3.5875 | |
| 191 | R | A | -3.3505 | |
| 192 | K | A | -3.8660 | |
| 193 | H | A | 0.0000 | |
| 194 | F | A | 0.0000 | |
| 195 | R | A | -2.9644 | |
| 196 | H | A | -2.4883 | |
| 197 | L | A | 0.0000 | |
| 198 | M | A | -1.5385 | |
| 199 | T | A | -1.7478 | |
| 200 | Q | A | -2.2770 | |
| 201 | C | A | 0.0000 | |
| 202 | D | A | -2.4237 | |
| 203 | F | A | 0.0000 | |
| 204 | T | A | -0.4325 | |
| 205 | P | A | -0.2366 | |
| 206 | W | A | 0.3892 | |
| 207 | L | A | 0.0000 | |
| 208 | A | A | 0.0000 | |
| 209 | W | A | -0.3731 | |
| 210 | H | A | -0.2617 | |
| 211 | V | A | 0.0000 | |
| 212 | A | A | 0.0000 | |
| 213 | T | A | -1.1893 | |
| 214 | N | A | -1.5728 | |
| 215 | T | A | 0.0000 | |
| 216 | S | A | -0.9539 | |
| 217 | N | A | -1.1529 | |
| 218 | V | A | 0.0765 | |
| 219 | L | A | 1.0519 | |
| 220 | D | A | -0.1713 | |
| 221 | R | A | -0.3374 | |
| 222 | S | A | -0.3438 | |
| 223 | W | A | 0.0000 | |
| 224 | T | A | 0.0000 | |
| 225 | W | A | -1.0588 | |
| 226 | Q | A | -1.4257 | |
| 227 | G | A | -1.1564 | |
| 228 | P | A | -1.8213 | |
| 229 | E | A | -2.8682 | |
| 230 | E | A | -2.8572 | |
| 231 | N | A | -2.0151 | |
| 232 | A | A | -1.7648 | |
| 233 | I | A | 0.0000 | |
| 234 | D | A | -2.7462 | |
| 235 | G | A | -2.4092 | |
| 236 | A | A | -2.0542 | |
| 237 | D | A | -2.7143 | |
| 238 | G | A | -2.4827 | |
| 239 | D | A | -2.7598 | |
| 240 | L | A | -1.5067 | |
| 241 | V | A | -1.4149 | |
| 242 | R | A | -2.5057 | |
| 243 | F | A | 0.0000 | |
| 244 | K | A | -3.2511 | |
| 245 | T | A | 0.0000 | |
| 246 | P | A | -1.4922 | |
| 247 | G | A | -1.3327 | |
| 248 | G | A | -1.7509 | |
| 249 | S | A | -2.2606 | |
| 250 | E | A | -3.6972 | |
| 251 | R | A | -3.1802 | |
| 252 | V | A | -1.8814 | |
| 253 | L | A | 0.0000 | |
| 254 | Q | A | -1.5460 | |
| 255 | P | A | 0.0000 | |
| 256 | V | A | -0.1954 | |
| 257 | W | A | 0.0172 | |
| 258 | K | A | -0.7248 | |
| 259 | D | A | 0.0000 | |
| 260 | C | A | -0.1767 | |
| 261 | R | A | -1.1730 | |
| 262 | M | A | 0.0000 | |
| 263 | F | A | -2.0334 | |
| 264 | R | A | -3.2924 | |
| 265 | E | A | -3.7976 | |
| 266 | G | A | -3.0208 | |
| 267 | R | A | -3.4169 | |
| 268 | D | A | -2.9472 | |
| 269 | V | A | -2.2446 | |
| 270 | K | A | -2.3148 | |
| 271 | D | A | -1.7567 | |
| 272 | F | A | 0.0000 | |
| 273 | I | A | -0.7581 | |
| 274 | L | A | -0.9323 | |
| 275 | Y | A | 0.0000 | |
| 276 | A | A | 0.0000 | |
| 277 | S | A | 0.0000 | |
| 278 | G | A | -1.4943 | |
| 279 | R | A | -2.2129 | |
| 280 | R | A | -1.7078 |