| Chain sequence(s) |
H: EVQLVQSGAEVKKPGESLKISCKVSGYSFTSQWIGWVRQMPGKGLEWIGMMYPGESETIYSPSFQGQVTISADNSISTAYLQWSSLKASDTAIYYCASGPGYSGYHYGWFDTWGQGTLVTVSS
L: DIVMTQSPLSLPVTPGEPASISCRSSQSLLRSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQTPYTFGQGTKLEIK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:01)
[INFO] Main: Simulation completed successfully. (00:01:03)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -1.9220 | |
| 2 | V | H | -1.0820 | |
| 3 | Q | H | -1.0630 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 0.2555 | |
| 6 | Q | H | 0.0000 | |
| 7 | S | H | -0.4170 | |
| 8 | G | H | -0.4236 | |
| 9 | A | H | 0.3956 | |
| 11 | E | H | 0.3952 | |
| 12 | V | H | 1.2360 | |
| 13 | K | H | -0.7763 | |
| 14 | K | H | -1.8933 | |
| 15 | P | H | -1.7661 | |
| 16 | G | H | -1.8063 | |
| 17 | E | H | -2.2657 | |
| 18 | S | H | -1.6514 | |
| 19 | L | H | 0.0000 | |
| 20 | K | H | -1.3862 | |
| 21 | I | H | 0.0000 | |
| 22 | S | H | -0.4285 | |
| 23 | C | H | 0.0000 | |
| 24 | K | H | -0.5598 | |
| 25 | V | H | 0.0000 | |
| 26 | S | H | -0.7671 | |
| 27 | G | H | -1.0519 | |
| 28 | Y | H | -0.4475 | |
| 29 | S | H | -0.3276 | |
| 30 | F | H | 0.0000 | |
| 35 | T | H | -0.6718 | |
| 36 | S | H | -0.0945 | |
| 37 | Q | H | 0.1444 | |
| 38 | W | H | 0.0054 | |
| 39 | I | H | 0.0000 | |
| 40 | G | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | R | H | -0.2644 | |
| 44 | Q | H | 0.0000 | |
| 45 | M | H | -0.4951 | |
| 46 | P | H | -0.7031 | |
| 47 | G | H | -1.3098 | |
| 48 | K | H | -2.2194 | |
| 49 | G | H | -1.3771 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -0.7317 | |
| 52 | W | H | 0.0000 | |
| 53 | I | H | 0.0000 | |
| 54 | G | H | 0.0000 | |
| 55 | M | H | 0.0000 | |
| 56 | M | H | 0.0000 | |
| 57 | Y | H | -0.8802 | |
| 58 | P | H | 0.0000 | |
| 59 | G | H | -1.5850 | |
| 62 | E | H | -2.5438 | |
| 63 | S | H | -2.1040 | |
| 64 | E | H | -2.3490 | |
| 65 | T | H | -0.8910 | |
| 66 | I | H | -0.0793 | |
| 67 | Y | H | 0.0582 | |
| 68 | S | H | 0.0000 | |
| 69 | P | H | -0.8945 | |
| 70 | S | H | -0.7124 | |
| 71 | F | H | -0.8778 | |
| 72 | Q | H | -1.5378 | |
| 74 | G | H | -1.3746 | |
| 75 | Q | H | -1.4810 | |
| 76 | V | H | 0.0000 | |
| 77 | T | H | -0.7077 | |
| 78 | I | H | 0.0000 | |
| 79 | S | H | -0.5249 | |
| 80 | A | H | -0.4214 | |
| 81 | D | H | -0.7010 | |
| 82 | N | H | -0.6933 | |
| 83 | S | H | 0.1815 | |
| 84 | I | H | 1.2279 | |
| 85 | S | H | 0.0319 | |
| 86 | T | H | 0.0000 | |
| 87 | A | H | 0.0000 | |
| 88 | Y | H | -0.4549 | |
| 89 | L | H | 0.0000 | |
| 90 | Q | H | -1.0571 | |
| 91 | W | H | 0.0000 | |
| 92 | S | H | -1.0842 | |
| 93 | S | H | -1.3884 | |
| 94 | L | H | 0.0000 | |
| 95 | K | H | -1.4557 | |
| 96 | A | H | -0.7990 | |
| 97 | S | H | -0.4227 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | 0.1738 | |
| 100 | A | H | 0.0000 | |
| 101 | I | H | 0.7052 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | S | H | 0.0000 | |
| 107 | G | H | 0.0000 | |
| 108 | P | H | 0.0000 | |
| 109 | G | H | 0.0000 | |
| 110 | Y | H | 1.2122 | |
| 111 | S | H | 0.5458 | |
| 111A | G | H | 0.5517 | |
| 112B | Y | H | 1.0980 | |
| 112A | H | H | 0.4585 | |
| 112 | Y | H | 0.6526 | |
| 113 | G | H | 0.0000 | |
| 114 | W | H | 0.0543 | |
| 115 | F | H | 0.0000 | |
| 116 | D | H | -0.8987 | |
| 117 | T | H | -0.6971 | |
| 118 | W | H | 0.0000 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -1.2091 | |
| 121 | G | H | -0.3311 | |
| 122 | T | H | 0.0000 | |
| 123 | L | H | 1.0969 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | 0.4025 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.6853 | |
| 128 | S | H | -0.8230 | |
| 1 | D | L | -1.5651 | |
| 2 | I | L | 0.0000 | |
| 3 | V | L | 0.8144 | |
| 4 | M | L | 0.0000 | |
| 5 | T | L | -0.5378 | |
| 6 | Q | L | 0.0000 | |
| 7 | S | L | -0.2141 | |
| 8 | P | L | 0.2168 | |
| 9 | L | L | 0.9768 | |
| 10 | S | L | 0.1957 | |
| 11 | L | L | -0.0041 | |
| 12 | P | L | -0.6444 | |
| 13 | V | L | 0.0000 | |
| 14 | T | L | -1.2632 | |
| 15 | P | L | -1.4048 | |
| 16 | G | L | -1.6863 | |
| 17 | E | L | -1.9484 | |
| 18 | P | L | -1.5547 | |
| 19 | A | L | 0.0000 | |
| 20 | S | L | -0.6356 | |
| 21 | I | L | 0.0000 | |
| 22 | S | L | -0.8327 | |
| 23 | C | L | 0.0000 | |
| 24 | R | L | -2.2487 | |
| 25 | S | L | 0.0000 | |
| 26 | S | L | -0.6633 | |
| 27 | Q | L | -0.8573 | |
| 28 | S | L | -0.6250 | |
| 29 | L | L | 0.0000 | |
| 30 | L | L | 0.2405 | |
| 31 | R | L | -0.5502 | |
| 32 | S | L | -0.9267 | |
| 34 | N | L | -1.3453 | |
| 35 | G | L | -0.8350 | |
| 36 | Y | L | -0.0415 | |
| 37 | N | L | 0.0200 | |
| 38 | Y | L | 0.0000 | |
| 39 | L | L | 0.0000 | |
| 40 | D | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | L | L | 0.0000 | |
| 44 | Q | L | -0.7176 | |
| 45 | K | L | -1.1050 | |
| 46 | P | L | -0.9877 | |
| 47 | G | L | -1.3444 | |
| 48 | Q | L | -1.8620 | |
| 49 | S | L | -1.1904 | |
| 50 | P | L | 0.0000 | |
| 51 | Q | L | -0.8226 | |
| 52 | L | L | 0.0000 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | -0.1677 | |
| 56 | L | L | 0.0000 | |
| 57 | G | L | 0.0000 | |
| 65 | S | L | -0.6237 | |
| 66 | N | L | -0.8932 | |
| 67 | R | L | -1.6039 | |
| 68 | A | L | -0.9230 | |
| 69 | S | L | -0.8137 | |
| 70 | G | L | -0.8792 | |
| 71 | V | L | -0.9306 | |
| 72 | P | L | -1.1901 | |
| 74 | D | L | -2.1628 | |
| 75 | R | L | 0.0000 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -1.1100 | |
| 78 | G | L | -0.7539 | |
| 79 | S | L | -0.7645 | |
| 80 | G | L | -1.0785 | |
| 83 | S | L | -0.7851 | |
| 84 | G | L | -0.6469 | |
| 85 | T | L | -1.3560 | |
| 86 | D | L | -2.0827 | |
| 87 | F | L | 0.0000 | |
| 88 | T | L | -1.0044 | |
| 89 | L | L | 0.0000 | |
| 90 | K | L | -1.1576 | |
| 91 | I | L | 0.0000 | |
| 92 | S | L | -1.6321 | |
| 93 | R | L | -2.1978 | |
| 94 | V | L | 0.0000 | |
| 95 | E | L | -1.7998 | |
| 96 | A | L | -1.0512 | |
| 97 | E | L | -1.7127 | |
| 98 | D | L | 0.0000 | |
| 99 | V | L | -0.2004 | |
| 100 | G | L | -0.6158 | |
| 101 | V | L | -0.0669 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | M | L | 0.0000 | |
| 106 | Q | L | 0.0000 | |
| 107 | A | L | 0.0000 | |
| 108 | L | L | 0.3763 | |
| 109 | Q | L | -0.5739 | |
| 114 | T | L | -0.4189 | |
| 115 | P | L | -0.4601 | |
| 116 | Y | L | -0.1426 | |
| 117 | T | L | -0.0242 | |
| 118 | F | L | 0.1192 | |
| 119 | G | L | 0.0000 | |
| 120 | Q | L | -0.9909 | |
| 121 | G | L | 0.0000 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -0.5983 | |
| 124 | L | L | 0.0000 | |
| 125 | E | L | -0.3621 | |
| 126 | I | L | 0.0168 | |
| 127 | K | L | -1.4498 |