| Chain sequence(s) |
H: QVQLQESGGGLVKPGGSLKLSCAASGFTFSSYGMSWVRQTPDKRLEWVATISSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLKSEDTAMYYCARLYYGYRYYFDYWGQGTMVTVSS
input PDB |
| Selected Chain(s) | H |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with H chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:37)
[INFO] Main: Simulation completed successfully. (00:00:38)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | H | -1.3405 | |
| 2 | V | H | -0.4783 | |
| 3 | Q | H | -0.9081 | |
| 4 | L | H | 0.0000 | |
| 5 | Q | H | -1.2909 | |
| 6 | E | H | -0.9365 | |
| 7 | S | H | -0.8167 | |
| 8 | G | H | -0.7236 | |
| 9 | G | H | -0.0603 | |
| 11 | G | H | 0.5374 | |
| 12 | L | H | 1.2547 | |
| 13 | V | H | -0.3024 | |
| 14 | K | H | -1.9628 | |
| 15 | P | H | -1.9765 | |
| 16 | G | H | -1.6303 | |
| 17 | G | H | -1.2991 | |
| 18 | S | H | -1.1202 | |
| 19 | L | H | -0.4619 | |
| 20 | K | H | -1.3886 | |
| 21 | L | H | 0.0000 | |
| 22 | S | H | -0.6488 | |
| 23 | C | H | 0.0000 | |
| 24 | A | H | -0.9098 | |
| 25 | A | H | 0.0000 | |
| 26 | S | H | -0.8715 | |
| 27 | G | H | -0.8687 | |
| 28 | F | H | -0.3127 | |
| 29 | T | H | -0.2153 | |
| 30 | F | H | 0.0000 | |
| 35 | S | H | -0.7335 | |
| 36 | S | H | -0.0583 | |
| 37 | Y | H | 0.5189 | |
| 38 | G | H | 0.0000 | |
| 39 | M | H | 0.0000 | |
| 40 | S | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | -0.9784 | |
| 45 | T | H | -2.0637 | |
| 46 | P | H | -2.2185 | |
| 47 | D | H | -3.1128 | |
| 48 | K | H | -3.2509 | |
| 49 | R | H | -2.6874 | |
| 50 | L | H | -0.2366 | |
| 51 | E | H | -0.2154 | |
| 52 | W | H | 0.5399 | |
| 53 | V | H | 0.0000 | |
| 54 | A | H | 0.0000 | |
| 55 | T | H | 0.4622 | |
| 56 | I | H | 0.0000 | |
| 57 | S | H | 0.1778 | |
| 58 | S | H | -0.2732 | |
| 59 | G | H | -0.5619 | |
| 62 | G | H | -0.2551 | |
| 63 | S | H | 0.1672 | |
| 64 | Y | H | 1.2085 | |
| 65 | T | H | 0.8970 | |
| 66 | Y | H | 0.5633 | |
| 67 | Y | H | -0.4571 | |
| 68 | P | H | -1.0926 | |
| 69 | D | H | -2.3087 | |
| 70 | S | H | -1.6691 | |
| 71 | V | H | 0.0000 | |
| 72 | K | H | -2.0399 | |
| 74 | G | H | -1.4575 | |
| 75 | R | H | -1.6421 | |
| 76 | F | H | 0.0000 | |
| 77 | T | H | -0.6194 | |
| 78 | I | H | 0.0000 | |
| 79 | S | H | -0.2058 | |
| 80 | R | H | -0.9198 | |
| 81 | D | H | -1.3934 | |
| 82 | N | H | -1.5359 | |
| 83 | A | H | -1.3102 | |
| 84 | K | H | -2.2281 | |
| 85 | N | H | -1.7092 | |
| 86 | T | H | -1.2107 | |
| 87 | L | H | 0.0000 | |
| 88 | Y | H | -0.3781 | |
| 89 | L | H | 0.0000 | |
| 90 | Q | H | -1.0273 | |
| 91 | M | H | 0.0000 | |
| 92 | S | H | -1.0930 | |
| 93 | S | H | -1.3395 | |
| 94 | L | H | 0.0000 | |
| 95 | K | H | -2.9610 | |
| 96 | S | H | -2.2775 | |
| 97 | E | H | -2.5133 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -0.6980 | |
| 100 | A | H | 0.0000 | |
| 101 | M | H | 0.2746 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.1637 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | R | H | 0.0000 | |
| 107 | L | H | 0.0000 | |
| 108 | Y | H | 2.4564 | |
| 109 | Y | H | 2.0700 | |
| 110 | G | H | 0.9004 | |
| 111 | Y | H | 0.8758 | |
| 112 | R | H | 0.0281 | |
| 113 | Y | H | 1.9491 | |
| 114 | Y | H | 2.3288 | |
| 115 | F | H | 1.7432 | |
| 116 | D | H | 1.0709 | |
| 117 | Y | H | 1.0949 | |
| 118 | W | H | 0.5353 | |
| 119 | G | H | -0.5530 | |
| 120 | Q | H | -1.3209 | |
| 121 | G | H | -0.5097 | |
| 122 | T | H | 0.0000 | |
| 123 | M | H | 0.7135 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | -0.0895 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -1.0321 | |
| 128 | S | H | -0.6292 |