| Chain sequence(s) |
H: QLQLQESGPGLVKPSETLSLTCTVSGGSIKSGSYYWGWIRQPPGKGLEWIGNIYYSGSTYYNPSLRSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAREGSYPNQFDPWGQGTLVTVSS
L: EIVMTQSPATLSVSPGERATLSCRASQSVSSNLAWYQQKPGQAPRLLIYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYHSFPFTFGGGTKVEIK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:08)
[INFO] Main: Simulation completed successfully. (00:01:09)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | H | -1.6963 | |
| 2 | L | H | -1.3921 | |
| 3 | Q | H | -2.1480 | |
| 4 | L | H | 0.0000 | |
| 5 | Q | H | -1.8841 | |
| 6 | E | H | 0.0000 | |
| 7 | S | H | -0.8807 | |
| 8 | G | H | -0.5143 | |
| 9 | P | H | -0.1607 | |
| 11 | G | H | 0.2028 | |
| 12 | L | H | 0.5456 | |
| 13 | V | H | 0.0000 | |
| 14 | K | H | -1.7345 | |
| 15 | P | H | -1.4496 | |
| 16 | S | H | -1.4313 | |
| 17 | E | H | -2.0806 | |
| 18 | T | H | -1.4923 | |
| 19 | L | H | 0.0000 | |
| 20 | S | H | -1.0135 | |
| 21 | L | H | 0.0000 | |
| 22 | T | H | -0.6462 | |
| 23 | C | H | 0.0000 | |
| 24 | T | H | -1.1700 | |
| 25 | V | H | 0.0000 | |
| 26 | S | H | -1.3585 | |
| 27 | G | H | -1.3900 | |
| 28 | G | H | -1.2875 | |
| 29 | S | H | -1.3521 | |
| 30 | I | H | 0.0000 | |
| 31 | K | H | -1.8251 | |
| 34 | S | H | -0.9791 | |
| 35 | G | H | -0.7344 | |
| 36 | S | H | -0.0949 | |
| 37 | Y | H | 0.2715 | |
| 38 | Y | H | 0.3845 | |
| 39 | W | H | 0.0000 | |
| 40 | G | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | I | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | -0.6472 | |
| 45 | P | H | -0.7851 | |
| 46 | P | H | -0.9098 | |
| 47 | G | H | -1.4636 | |
| 48 | K | H | -2.2523 | |
| 49 | G | H | -1.3688 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -0.6743 | |
| 52 | W | H | 0.0000 | |
| 53 | I | H | 0.0000 | |
| 54 | G | H | 0.0000 | |
| 55 | N | H | 0.0000 | |
| 56 | I | H | 0.0000 | |
| 57 | Y | H | 0.3243 | |
| 58 | Y | H | -0.1825 | |
| 59 | S | H | -0.3541 | |
| 63 | G | H | -0.3130 | |
| 64 | S | H | 0.0227 | |
| 65 | T | H | 0.4796 | |
| 66 | Y | H | 1.0913 | |
| 67 | Y | H | 0.1572 | |
| 68 | N | H | 0.0000 | |
| 69 | P | H | -0.8655 | |
| 70 | S | H | -1.0087 | |
| 71 | L | H | 0.0000 | |
| 72 | R | H | -1.7862 | |
| 74 | S | H | -1.2436 | |
| 75 | R | H | -1.3243 | |
| 76 | V | H | 0.0000 | |
| 77 | T | H | -0.8690 | |
| 78 | I | H | 0.0000 | |
| 79 | S | H | -0.4212 | |
| 80 | V | H | -0.5700 | |
| 81 | D | H | -1.3838 | |
| 82 | T | H | -1.4412 | |
| 83 | S | H | -1.5238 | |
| 84 | K | H | -2.1452 | |
| 85 | N | H | -1.7735 | |
| 86 | Q | H | -1.4384 | |
| 87 | F | H | 0.0000 | |
| 88 | S | H | -0.5906 | |
| 89 | L | H | 0.0000 | |
| 90 | K | H | -1.6174 | |
| 91 | L | H | 0.0000 | |
| 92 | S | H | -1.1609 | |
| 93 | S | H | -1.0916 | |
| 94 | V | H | 0.0000 | |
| 95 | T | H | -0.5907 | |
| 96 | A | H | -0.2044 | |
| 97 | A | H | 0.0556 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | 0.2254 | |
| 100 | A | H | 0.0000 | |
| 101 | V | H | 0.4146 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | R | H | -0.3480 | |
| 107 | E | H | 0.0000 | |
| 108 | G | H | 0.0000 | |
| 109 | S | H | 0.4654 | |
| 110 | Y | H | 1.1435 | |
| 112 | P | H | 0.3280 | |
| 113 | N | H | -0.0569 | |
| 114 | Q | H | 0.0000 | |
| 115 | F | H | 0.0000 | |
| 116 | D | H | -0.7480 | |
| 117 | P | H | -0.9400 | |
| 118 | W | H | 0.0000 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -1.9386 | |
| 121 | G | H | 0.0000 | |
| 122 | T | H | -0.1134 | |
| 123 | L | H | 0.8841 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | 0.2307 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.4924 | |
| 128 | S | H | -0.6204 | |
| 1 | E | L | -1.3973 | |
| 2 | I | L | -0.2505 | |
| 3 | V | L | 0.7753 | |
| 4 | M | L | 0.0000 | |
| 5 | T | L | -0.6629 | |
| 6 | Q | L | -0.7046 | |
| 7 | S | L | -0.7432 | |
| 8 | P | L | -0.3996 | |
| 9 | A | L | -0.3794 | |
| 10 | T | L | -0.5389 | |
| 11 | L | L | -0.4450 | |
| 12 | S | L | -0.6224 | |
| 13 | V | L | -1.1235 | |
| 14 | S | L | -1.8791 | |
| 15 | P | L | -1.9989 | |
| 16 | G | L | -2.1707 | |
| 17 | E | L | -3.3279 | |
| 18 | R | L | -2.9857 | |
| 19 | A | L | 0.0000 | |
| 20 | T | L | -0.7285 | |
| 21 | L | L | 0.0000 | |
| 22 | S | L | -0.9405 | |
| 23 | C | L | 0.0000 | |
| 24 | R | L | -2.4430 | |
| 25 | A | L | 0.0000 | |
| 26 | S | L | -0.9998 | |
| 27 | Q | L | -1.6849 | |
| 28 | S | L | -1.4776 | |
| 29 | V | L | 0.0000 | |
| 36 | S | L | -0.9742 | |
| 37 | S | L | -0.8540 | |
| 38 | N | L | -0.7783 | |
| 39 | L | L | 0.0000 | |
| 40 | A | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | Q | L | 0.0000 | |
| 44 | Q | L | 0.0000 | |
| 45 | K | L | -0.8490 | |
| 46 | P | L | -0.7616 | |
| 47 | G | L | -1.3252 | |
| 48 | Q | L | -1.9098 | |
| 49 | A | L | -1.2249 | |
| 50 | P | L | 0.0000 | |
| 51 | R | L | -1.0173 | |
| 52 | L | L | 0.0000 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | -0.1778 | |
| 56 | G | L | -0.3960 | |
| 57 | A | L | 0.0000 | |
| 65 | S | L | -0.6502 | |
| 66 | T | L | -0.5792 | |
| 67 | R | L | -0.9816 | |
| 68 | A | L | -0.6576 | |
| 69 | T | L | -0.4517 | |
| 70 | G | L | -0.5478 | |
| 71 | I | L | -0.4243 | |
| 72 | P | L | -0.3153 | |
| 74 | A | L | -0.3127 | |
| 75 | R | L | -0.6998 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -0.4832 | |
| 78 | G | L | -0.4873 | |
| 79 | S | L | -0.6865 | |
| 80 | G | L | -1.1921 | |
| 83 | S | L | -1.1953 | |
| 84 | G | L | -1.3301 | |
| 85 | T | L | -1.8799 | |
| 86 | E | L | -2.3873 | |
| 87 | F | L | 0.0000 | |
| 88 | T | L | -0.8175 | |
| 89 | L | L | 0.0000 | |
| 90 | T | L | -0.6409 | |
| 91 | I | L | 0.0000 | |
| 92 | S | L | -1.7051 | |
| 93 | S | L | -2.1583 | |
| 94 | L | L | 0.0000 | |
| 95 | Q | L | -1.6998 | |
| 96 | S | L | -0.8001 | |
| 97 | E | L | -0.7379 | |
| 98 | D | L | 0.0000 | |
| 99 | F | L | 0.8682 | |
| 100 | A | L | 0.0000 | |
| 101 | V | L | -0.1312 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | Q | L | 0.0000 | |
| 106 | Q | L | 0.0000 | |
| 107 | Y | L | 0.0000 | |
| 108 | H | L | -0.7643 | |
| 109 | S | L | -0.4653 | |
| 114 | F | L | 0.3322 | |
| 115 | P | L | 0.0000 | |
| 116 | F | L | 0.0000 | |
| 117 | T | L | -0.0062 | |
| 118 | F | L | 0.0000 | |
| 119 | G | L | 0.0000 | |
| 120 | G | L | -0.7549 | |
| 121 | G | L | -0.7908 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -0.7827 | |
| 124 | V | L | 0.0000 | |
| 125 | E | L | -0.7136 | |
| 126 | I | L | -0.8137 | |
| 127 | K | L | -1.8137 |