| Chain sequence(s) |
A: GPLPLDPEPELRDTSDYVEPTDLLYVAETDLLTEVGHPTKDIVVNGKVVVPKVSATDWKVFKLTLPDPNTLPLPSEDFLDRSTEIAIWRLLAFKIGVFGPLGKGTYGHPNFNRLGNVDNPTTYQHGTANNTQNYSFTPKLKQAYIIGDRPPTGVYEAPAAPAPGLPPGALPPLTRVSTTIEHGDKADIGFGARDYAALDPEKNNVPDDILDTTTKRPDYEGMKAEPYGTRMFTYDEYEKSKDIEHLVLNGPDPIPLPSSPPPSPYYTPPPASSPYAVRPSTRYFTIPDAGEIKEEDLLFNKPIWLEKTAGKNNGVLWHNQLYVTVLDNTRAEVETITTQLSTPAPNVYDPSNYVTSKRYTREYQLSLIVQLCRIPLTPEILEHLSRLDPSILVNANLPDIPPVERPDPLAGKKFIEIDLTNKLSTDLSKTELGREYLNR
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:04)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.2066 | |
| 2 | P | A | 0.4522 | |
| 3 | L | A | 1.3272 | |
| 4 | P | A | 0.5237 | |
| 5 | L | A | 0.5200 | |
| 6 | D | A | -1.5316 | |
| 7 | P | A | -1.9648 | |
| 8 | E | A | -2.6572 | |
| 9 | P | A | -2.7405 | |
| 10 | E | A | -2.3699 | |
| 11 | L | A | -1.2647 | |
| 12 | R | A | -1.7721 | |
| 13 | D | A | -1.7353 | |
| 14 | T | A | 0.0000 | |
| 15 | S | A | -1.9673 | |
| 16 | D | A | -2.4816 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | E | A | -1.9725 | |
| 20 | P | A | -1.4294 | |
| 21 | T | A | 0.0000 | |
| 22 | D | A | -1.6473 | |
| 23 | L | A | -0.5525 | |
| 24 | L | A | -0.2380 | |
| 25 | Y | A | -0.1273 | |
| 26 | V | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | E | A | -1.4583 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -1.3398 | |
| 31 | L | A | 0.2829 | |
| 32 | L | A | 0.1898 | |
| 33 | T | A | 0.1148 | |
| 34 | E | A | -0.0440 | |
| 35 | V | A | 0.5529 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -1.3689 | |
| 38 | P | A | 0.0000 | |
| 39 | T | A | -1.5681 | |
| 40 | K | A | -1.9138 | |
| 41 | D | A | -0.5318 | |
| 42 | I | A | 1.5698 | |
| 43 | V | A | 2.4275 | |
| 44 | V | A | 1.8254 | |
| 45 | N | A | -0.5030 | |
| 46 | G | A | -0.3255 | |
| 47 | K | A | 0.0188 | |
| 48 | V | A | 2.2310 | |
| 49 | V | A | 2.8690 | |
| 50 | V | A | 1.8558 | |
| 51 | P | A | 0.3734 | |
| 52 | K | A | -0.9560 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | A | A | 0.0000 | |
| 56 | T | A | 0.0000 | |
| 57 | D | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | K | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | K | A | -1.2912 | |
| 63 | L | A | 0.0000 | |
| 64 | T | A | -1.2901 | |
| 65 | L | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -0.7994 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -0.9224 | |
| 70 | T | A | -0.2080 | |
| 71 | L | A | -0.0047 | |
| 72 | P | A | -0.3010 | |
| 73 | L | A | -0.5437 | |
| 74 | P | A | -0.7391 | |
| 75 | S | A | -1.5767 | |
| 76 | E | A | -2.9427 | |
| 77 | D | A | -3.1715 | |
| 78 | F | A | -1.8311 | |
| 79 | L | A | 0.0000 | |
| 80 | D | A | -3.3538 | |
| 81 | R | A | -3.1531 | |
| 82 | S | A | -1.7259 | |
| 83 | T | A | -1.3165 | |
| 84 | E | A | -1.5877 | |
| 85 | I | A | 0.0000 | |
| 86 | A | A | 0.0000 | |
| 87 | I | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | -0.5091 | |
| 90 | L | A | 0.0000 | |
| 91 | L | A | -0.3388 | |
| 92 | A | A | 0.0000 | |
| 93 | F | A | 0.0000 | |
| 94 | K | A | -0.9079 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | 0.0000 | |
| 97 | V | A | 0.0000 | |
| 98 | F | A | 0.6357 | |
| 99 | G | A | -0.2902 | |
| 100 | P | A | -0.3805 | |
| 101 | L | A | -0.4634 | |
| 102 | G | A | -1.0491 | |
| 103 | K | A | -1.4528 | |
| 104 | G | A | 0.0000 | |
| 105 | T | A | -0.5450 | |
| 106 | Y | A | 0.0000 | |
| 107 | G | A | -0.9309 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | -1.8022 | |
| 110 | N | A | -2.7087 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | 0.0000 | |
| 113 | R | A | -1.2723 | |
| 114 | L | A | 0.0000 | |
| 115 | G | A | -0.8432 | |
| 116 | N | A | -1.1838 | |
| 117 | V | A | -0.8867 | |
| 118 | D | A | -2.3827 | |
| 119 | N | A | -2.2977 | |
| 120 | P | A | -1.2283 | |
| 121 | T | A | -0.7382 | |
| 122 | T | A | -0.3264 | |
| 123 | Y | A | 0.4230 | |
| 124 | Q | A | -0.5115 | |
| 125 | H | A | -0.6913 | |
| 126 | G | A | -0.9695 | |
| 127 | T | A | -0.7542 | |
| 128 | A | A | -0.8432 | |
| 129 | N | A | -1.7501 | |
| 130 | N | A | -1.3896 | |
| 131 | T | A | -1.8649 | |
| 132 | Q | A | -2.3457 | |
| 133 | N | A | -2.2866 | |
| 134 | Y | A | -1.2721 | |
| 135 | S | A | -0.6804 | |
| 136 | F | A | 0.0000 | |
| 137 | T | A | -0.2670 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | L | A | 0.0000 | |
| 141 | K | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | A | A | 0.0000 | |
| 144 | Y | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | I | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | D | A | 0.0000 | |
| 149 | R | A | -0.6476 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | -0.4421 | |
| 153 | G | A | 0.0000 | |
| 154 | V | A | 0.0000 | |
| 155 | Y | A | -1.2708 | |
| 156 | E | A | -1.5676 | |
| 157 | A | A | -0.8078 | |
| 158 | P | A | -0.1360 | |
| 159 | A | A | -0.2018 | |
| 160 | A | A | -0.0410 | |
| 161 | P | A | -0.0095 | |
| 162 | A | A | -0.1644 | |
| 163 | P | A | -0.3477 | |
| 164 | G | A | -0.3495 | |
| 165 | L | A | 0.3814 | |
| 166 | P | A | -0.0892 | |
| 167 | P | A | -0.2655 | |
| 168 | G | A | -0.0702 | |
| 169 | A | A | 0.7066 | |
| 170 | L | A | 1.4886 | |
| 171 | P | A | 0.8292 | |
| 172 | P | A | 0.4267 | |
| 173 | L | A | 0.1919 | |
| 174 | T | A | -0.8718 | |
| 175 | R | A | -1.9325 | |
| 176 | V | A | -0.8671 | |
| 177 | S | A | -0.7115 | |
| 178 | T | A | -0.2680 | |
| 179 | T | A | -0.5703 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | -1.1630 | |
| 182 | H | A | -1.0423 | |
| 183 | G | A | -0.8005 | |
| 184 | D | A | -0.8485 | |
| 185 | K | A | 0.0000 | |
| 186 | A | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | -0.3690 | |
| 190 | F | A | -0.0356 | |
| 191 | G | A | -0.4906 | |
| 192 | A | A | -1.0624 | |
| 193 | R | A | -1.4085 | |
| 194 | D | A | -1.0532 | |
| 195 | Y | A | 0.0000 | |
| 196 | A | A | -1.3650 | |
| 197 | A | A | -0.7365 | |
| 198 | L | A | -0.4334 | |
| 199 | D | A | 0.0000 | |
| 200 | P | A | -1.6473 | |
| 201 | E | A | -2.3410 | |
| 202 | K | A | -3.0261 | |
| 203 | N | A | -2.1157 | |
| 204 | N | A | -1.2810 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | D | A | -1.5196 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | L | A | -1.3496 | |
| 211 | D | A | -2.1154 | |
| 212 | T | A | -1.0754 | |
| 213 | T | A | -0.8377 | |
| 214 | T | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | R | A | -1.1093 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | -1.2388 | |
| 219 | Y | A | -1.3569 | |
| 220 | E | A | -2.3235 | |
| 221 | G | A | -1.5670 | |
| 222 | M | A | 0.0000 | |
| 223 | K | A | -1.9789 | |
| 224 | A | A | -1.1996 | |
| 225 | E | A | -1.2194 | |
| 226 | P | A | -0.6645 | |
| 227 | Y | A | -0.5517 | |
| 228 | G | A | 0.0000 | |
| 229 | T | A | 0.0000 | |
| 230 | R | A | -0.6418 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | T | A | -0.2677 | |
| 234 | Y | A | -0.0839 | |
| 235 | D | A | -0.8214 | |
| 236 | E | A | -1.0809 | |
| 237 | Y | A | -0.9247 | |
| 238 | E | A | -1.5377 | |
| 239 | K | A | -1.7291 | |
| 240 | S | A | -2.1206 | |
| 241 | K | A | -2.8878 | |
| 242 | D | A | -2.4494 | |
| 243 | I | A | -0.9039 | |
| 244 | E | A | -1.2823 | |
| 245 | H | A | -0.8654 | |
| 246 | L | A | 0.0000 | |
| 247 | V | A | 0.0000 | |
| 248 | L | A | -0.1284 | |
| 249 | N | A | -0.8766 | |
| 250 | G | A | -0.8714 | |
| 251 | P | A | -0.5489 | |
| 252 | D | A | -0.2213 | |
| 253 | P | A | 0.5204 | |
| 254 | I | A | 1.6520 | |
| 255 | P | A | 0.6737 | |
| 256 | L | A | 0.9047 | |
| 257 | P | A | 0.2468 | |
| 258 | S | A | -0.3013 | |
| 259 | S | A | -0.6378 | |
| 260 | P | A | -0.6918 | |
| 261 | P | A | -0.7167 | |
| 262 | P | A | -0.4107 | |
| 263 | S | A | 0.0000 | |
| 264 | P | A | 0.3812 | |
| 265 | Y | A | 1.4256 | |
| 266 | Y | A | 0.9784 | |
| 267 | T | A | 0.1316 | |
| 268 | P | A | 0.1096 | |
| 269 | P | A | 0.0939 | |
| 270 | P | A | -0.0903 | |
| 271 | A | A | 0.1884 | |
| 272 | S | A | 0.0151 | |
| 273 | S | A | 0.3154 | |
| 274 | P | A | 0.5237 | |
| 275 | Y | A | 1.3001 | |
| 276 | A | A | 1.0199 | |
| 277 | V | A | 1.5100 | |
| 278 | R | A | 0.2435 | |
| 279 | P | A | -0.2569 | |
| 280 | S | A | -0.4092 | |
| 281 | T | A | 0.0474 | |
| 282 | R | A | 0.1129 | |
| 283 | Y | A | 1.2286 | |
| 284 | F | A | 0.6820 | |
| 285 | T | A | -0.2891 | |
| 286 | I | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | D | A | -1.6387 | |
| 289 | A | A | 0.0000 | |
| 290 | G | A | -1.8673 | |
| 291 | E | A | -2.5942 | |
| 292 | I | A | -1.9611 | |
| 293 | K | A | -3.0085 | |
| 294 | E | A | -3.3661 | |
| 295 | E | A | -3.1452 | |
| 296 | D | A | -2.1860 | |
| 297 | L | A | -1.3737 | |
| 298 | L | A | -0.8982 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.2719 | |
| 301 | K | A | -1.5259 | |
| 302 | P | A | -0.8748 | |
| 303 | I | A | -0.1998 | |
| 304 | W | A | -0.3041 | |
| 305 | L | A | 0.0000 | |
| 306 | E | A | -2.5149 | |
| 307 | K | A | -2.6999 | |
| 308 | T | A | 0.0000 | |
| 309 | A | A | -0.7488 | |
| 310 | G | A | -1.1760 | |
| 311 | K | A | -1.7740 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | L | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.8411 | |
| 319 | N | A | -0.6059 | |
| 320 | Q | A | -0.7813 | |
| 321 | L | A | 0.0000 | |
| 322 | Y | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | L | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | 0.0000 | |
| 331 | A | A | 0.0000 | |
| 332 | E | A | -2.1404 | |
| 333 | V | A | -1.5577 | |
| 334 | E | A | -1.7395 | |
| 335 | T | A | -0.7289 | |
| 336 | I | A | 0.7962 | |
| 337 | T | A | 0.6576 | |
| 338 | T | A | 0.4453 | |
| 339 | Q | A | -0.2257 | |
| 340 | L | A | 1.1676 | |
| 341 | S | A | 0.2690 | |
| 342 | T | A | -0.0732 | |
| 343 | P | A | 0.0627 | |
| 344 | A | A | 0.1795 | |
| 345 | P | A | -0.1323 | |
| 346 | N | A | -0.3136 | |
| 347 | V | A | 1.4820 | |
| 348 | Y | A | 1.3755 | |
| 349 | D | A | 0.0031 | |
| 350 | P | A | 0.0637 | |
| 351 | S | A | -0.0435 | |
| 352 | N | A | 0.2023 | |
| 353 | Y | A | 0.8687 | |
| 354 | V | A | 1.1455 | |
| 355 | T | A | 0.3570 | |
| 356 | S | A | -0.5610 | |
| 357 | K | A | -1.8852 | |
| 358 | R | A | -1.5989 | |
| 359 | Y | A | 0.0000 | |
| 360 | T | A | -0.3281 | |
| 361 | R | A | 0.0000 | |
| 362 | E | A | 0.1181 | |
| 363 | Y | A | 0.0000 | |
| 364 | Q | A | -0.4638 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | 0.0000 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | V | A | 0.0000 | |
| 370 | Q | A | -0.4094 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | R | A | -1.1691 | |
| 374 | I | A | 0.0000 | |
| 375 | P | A | -0.9879 | |
| 376 | L | A | -0.6940 | |
| 377 | T | A | -0.8507 | |
| 378 | P | A | -1.4435 | |
| 379 | E | A | -2.4434 | |
| 380 | I | A | 0.0000 | |
| 381 | L | A | -1.2425 | |
| 382 | E | A | -2.5425 | |
| 383 | H | A | 0.0000 | |
| 384 | L | A | 0.0000 | |
| 385 | S | A | -1.2734 | |
| 386 | R | A | -1.2518 | |
| 387 | L | A | 0.0000 | |
| 388 | D | A | -0.5517 | |
| 389 | P | A | -0.6830 | |
| 390 | S | A | -0.7117 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | 0.0000 | |
| 393 | V | A | -0.9906 | |
| 394 | N | A | -1.5246 | |
| 395 | A | A | -1.4855 | |
| 396 | N | A | -2.0813 | |
| 397 | L | A | -1.5557 | |
| 398 | P | A | -1.4714 | |
| 399 | D | A | -1.8717 | |
| 400 | I | A | -0.6675 | |
| 401 | P | A | -0.6123 | |
| 402 | P | A | -0.5586 | |
| 403 | V | A | 0.4052 | |
| 404 | E | A | -1.7066 | |
| 405 | R | A | -1.8323 | |
| 406 | P | A | -1.6646 | |
| 407 | D | A | -2.2204 | |
| 408 | P | A | -1.2162 | |
| 409 | L | A | -1.0850 | |
| 410 | A | A | -1.2037 | |
| 411 | G | A | -1.3834 | |
| 412 | K | A | -1.9599 | |
| 413 | K | A | -2.4552 | |
| 414 | F | A | -1.4147 | |
| 415 | I | A | -1.1007 | |
| 416 | E | A | -2.3061 | |
| 417 | I | A | 0.0000 | |
| 418 | D | A | -2.5950 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -1.4695 | |
| 421 | N | A | -1.8989 | |
| 422 | K | A | -1.6609 | |
| 423 | L | A | -0.6981 | |
| 424 | S | A | -0.9395 | |
| 425 | T | A | -0.6077 | |
| 426 | D | A | -1.6474 | |
| 427 | L | A | 0.0000 | |
| 428 | S | A | -1.7850 | |
| 429 | K | A | -2.6518 | |
| 430 | T | A | 0.0000 | |
| 431 | E | A | -2.0761 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -2.3802 | |
| 435 | E | A | -1.7610 | |
| 436 | Y | A | -0.7711 | |
| 437 | L | A | -0.2807 | |
| 438 | N | A | -1.8329 | |
| 439 | R | A | -2.1637 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine