| Chain sequence(s) |
A: GPSVFLFPPKPRDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSWRERTKEEVSLTCLVKGFYPSDIAVWWWSEGEPENNYKTTPPVLDSDGSFFLYSKLTVEAEEWWEGERFRCRVMHEALHNHYTRWWLRRSPGK
B: GPSVFLFPPKPRDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSWRERTKEEVSLTCLVKGFYPSDIAVWWWSEGEPENNYKTTPPVLDSDGSFFLYSKLTVEAEEWWEGERFRCRVMHEALHNHYTRWWLRRSPGK input PDB |
| Selected Chain(s) | A,B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:06:51)
[INFO] Main: Simulation completed successfully. (00:06:53)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.5925 | |
| 2 | P | A | 0.0000 | |
| 3 | S | A | -0.0116 | |
| 4 | V | A | 0.0000 | |
| 5 | F | A | 1.0989 | |
| 6 | L | A | 0.7783 | |
| 7 | F | A | 0.9728 | |
| 8 | P | A | -0.2405 | |
| 9 | P | A | 0.0000 | |
| 10 | K | A | -2.1917 | |
| 11 | P | A | -1.5041 | |
| 12 | R | A | -1.4362 | |
| 13 | D | A | -1.4746 | |
| 14 | T | A | 0.0000 | |
| 15 | L | A | 0.0000 | |
| 16 | M | A | 0.1929 | |
| 17 | I | A | 1.3611 | |
| 18 | S | A | -0.0086 | |
| 19 | R | A | -1.3426 | |
| 20 | T | A | -0.8734 | |
| 21 | P | A | 0.0000 | |
| 22 | E | A | -1.2442 | |
| 23 | V | A | 0.0000 | |
| 24 | T | A | 0.1072 | |
| 25 | C | A | 0.0000 | |
| 26 | V | A | 0.0000 | |
| 27 | V | A | 0.0000 | |
| 28 | V | A | -0.5694 | |
| 29 | D | A | -1.2330 | |
| 30 | V | A | 0.0000 | |
| 31 | S | A | -1.9428 | |
| 32 | H | A | -2.5206 | |
| 33 | E | A | -2.9736 | |
| 34 | D | A | -2.5696 | |
| 35 | P | A | -2.6835 | |
| 36 | E | A | -3.1254 | |
| 37 | V | A | -2.0531 | |
| 38 | K | A | -2.2392 | |
| 39 | F | A | -1.2138 | |
| 40 | N | A | -1.1920 | |
| 41 | W | A | 0.0000 | |
| 42 | Y | A | -0.6581 | |
| 43 | V | A | -0.8568 | |
| 44 | D | A | -2.1092 | |
| 45 | G | A | -0.8849 | |
| 46 | V | A | 0.5639 | |
| 47 | E | A | -0.7234 | |
| 48 | V | A | -0.5694 | |
| 49 | H | A | -1.8971 | |
| 50 | N | A | -2.1857 | |
| 51 | A | A | -1.8859 | |
| 52 | K | A | -2.3925 | |
| 53 | T | A | -1.8949 | |
| 54 | K | A | -2.1442 | |
| 55 | P | A | -2.3327 | |
| 56 | R | A | -3.5835 | |
| 57 | E | A | -3.3557 | |
| 58 | E | A | -3.1113 | |
| 59 | Q | A | -1.4304 | |
| 60 | Y | A | 0.3234 | |
| 61 | N | A | -0.5298 | |
| 62 | S | A | -0.8798 | |
| 63 | T | A | -1.7033 | |
| 64 | Y | A | -2.2511 | |
| 65 | R | A | -2.1823 | |
| 66 | V | A | 0.0000 | |
| 67 | V | A | 0.0000 | |
| 68 | S | A | 0.0000 | |
| 69 | V | A | 0.0000 | |
| 70 | L | A | 0.0000 | |
| 71 | T | A | -0.7041 | |
| 72 | V | A | 0.0000 | |
| 73 | L | A | 0.6727 | |
| 74 | H | A | 0.0000 | |
| 75 | Q | A | -1.1264 | |
| 76 | D | A | -1.3420 | |
| 77 | W | A | 0.0000 | |
| 78 | L | A | -0.9718 | |
| 79 | N | A | -2.0350 | |
| 80 | G | A | -2.0099 | |
| 81 | K | A | -2.0491 | |
| 82 | E | A | -1.9241 | |
| 83 | Y | A | 0.0000 | |
| 84 | K | A | -1.6099 | |
| 85 | C | A | 0.0000 | |
| 86 | K | A | -1.5548 | |
| 87 | V | A | 0.0000 | |
| 88 | S | A | -1.4453 | |
| 89 | N | A | 0.0000 | |
| 90 | K | A | -2.5284 | |
| 91 | A | A | -1.4354 | |
| 92 | L | A | -0.5863 | |
| 93 | P | A | -0.4537 | |
| 94 | A | A | -0.4031 | |
| 95 | P | A | -0.8467 | |
| 96 | I | A | -0.5933 | |
| 97 | E | A | -1.9346 | |
| 98 | K | A | -1.2273 | |
| 99 | T | A | -0.9937 | |
| 100 | I | A | -0.1573 | |
| 101 | S | A | -1.0250 | |
| 102 | K | A | 0.0000 | |
| 103 | A | A | -1.0694 | |
| 104 | K | A | -2.3080 | |
| 105 | G | A | -1.9564 | |
| 106 | Q | A | -2.1361 | |
| 107 | P | A | -1.7687 | |
| 108 | R | A | -2.0414 | |
| 109 | E | A | -2.5674 | |
| 110 | P | A | 0.0000 | |
| 111 | Q | A | -1.0051 | |
| 112 | V | A | 0.0000 | |
| 113 | Y | A | 0.0000 | |
| 114 | T | A | -0.1182 | |
| 115 | L | A | 0.0000 | |
| 116 | P | A | -0.5511 | |
| 117 | P | A | -0.4277 | |
| 118 | S | A | 0.1224 | |
| 119 | W | A | 0.5943 | |
| 120 | R | A | -0.4518 | |
| 121 | E | A | 0.0000 | |
| 122 | R | A | -1.5219 | |
| 123 | T | A | -1.3174 | |
| 124 | K | A | -2.6215 | |
| 125 | E | A | -3.4145 | |
| 126 | E | A | -3.0521 | |
| 127 | V | A | 0.0000 | |
| 128 | S | A | 0.0000 | |
| 129 | L | A | 0.0000 | |
| 130 | T | A | 0.0000 | |
| 131 | C | A | 0.0000 | |
| 132 | L | A | 0.0000 | |
| 133 | V | A | 0.0000 | |
| 134 | K | A | 0.0000 | |
| 135 | G | A | -0.8713 | |
| 136 | F | A | 0.0000 | |
| 137 | Y | A | -0.9995 | |
| 138 | P | A | 0.0000 | |
| 139 | S | A | -0.1509 | |
| 140 | D | A | -1.0191 | |
| 141 | I | A | 0.0000 | |
| 142 | A | A | -0.6171 | |
| 143 | V | A | 0.0000 | |
| 144 | W | A | 0.0000 | |
| 145 | W | A | 0.0000 | |
| 146 | W | A | -1.7268 | |
| 147 | S | A | 0.0000 | |
| 148 | E | A | -2.9784 | |
| 149 | G | A | -2.3036 | |
| 150 | E | A | -2.8244 | |
| 151 | P | A | -1.9899 | |
| 152 | E | A | -1.8902 | |
| 153 | N | A | -2.0237 | |
| 154 | N | A | -1.4836 | |
| 155 | Y | A | -0.9591 | |
| 156 | K | A | -0.7949 | |
| 157 | T | A | -0.2163 | |
| 158 | T | A | 0.0000 | |
| 159 | P | A | -0.1567 | |
| 160 | P | A | 0.1778 | |
| 161 | V | A | 0.5846 | |
| 162 | L | A | 0.8326 | |
| 163 | D | A | -0.3767 | |
| 164 | S | A | -1.0687 | |
| 165 | D | A | -1.8317 | |
| 166 | G | A | -0.7596 | |
| 167 | S | A | 0.0000 | |
| 168 | F | A | 0.2584 | |
| 169 | F | A | 0.0000 | |
| 170 | L | A | 0.0000 | |
| 171 | Y | A | 0.0000 | |
| 172 | S | A | 0.0000 | |
| 173 | K | A | 0.0000 | |
| 174 | L | A | 0.0000 | |
| 175 | T | A | 0.0000 | |
| 176 | V | A | 0.0000 | |
| 177 | E | A | -2.8943 | |
| 178 | A | A | 0.0000 | |
| 179 | E | A | -3.6772 | |
| 180 | E | A | -3.2225 | |
| 181 | W | A | 0.0000 | |
| 182 | W | A | -2.3292 | |
| 183 | E | A | -3.1463 | |
| 184 | G | A | -2.7770 | |
| 185 | E | A | -2.9928 | |
| 186 | R | A | -2.7131 | |
| 187 | F | A | 0.0000 | |
| 188 | R | A | -1.1768 | |
| 189 | C | A | 0.0000 | |
| 190 | R | A | -0.8155 | |
| 191 | V | A | 0.0000 | |
| 192 | M | A | 0.0000 | |
| 193 | H | A | 0.0000 | |
| 194 | E | A | -1.1123 | |
| 195 | A | A | -1.5326 | |
| 196 | L | A | -1.4448 | |
| 197 | H | A | -1.7772 | |
| 198 | N | A | -1.6756 | |
| 199 | H | A | -0.9923 | |
| 200 | Y | A | -0.7711 | |
| 201 | T | A | -1.0937 | |
| 202 | R | A | -1.5022 | |
| 203 | W | A | -0.2218 | |
| 204 | W | A | -0.1850 | |
| 205 | L | A | 0.0000 | |
| 206 | R | A | -2.7362 | |
| 207 | R | A | -2.6967 | |
| 208 | S | A | -1.6514 | |
| 209 | P | A | -1.6927 | |
| 210 | G | A | -1.6684 | |
| 211 | K | A | -2.2403 | |
| 1 | G | B | -0.5896 | |
| 2 | P | B | 0.0000 | |
| 3 | S | B | -0.0364 | |
| 4 | V | B | 0.0000 | |
| 5 | F | B | 0.8879 | |
| 6 | L | B | 0.6387 | |
| 7 | F | B | 0.9883 | |
| 8 | P | B | -0.1861 | |
| 9 | P | B | 0.0000 | |
| 10 | K | B | -2.1124 | |
| 11 | P | B | -1.4816 | |
| 12 | R | B | -1.3335 | |
| 13 | D | B | -1.1865 | |
| 14 | T | B | 0.0000 | |
| 15 | L | B | 0.0000 | |
| 16 | M | B | 0.4619 | |
| 17 | I | B | 1.5553 | |
| 18 | S | B | 0.2307 | |
| 19 | R | B | -0.8498 | |
| 20 | T | B | -0.5566 | |
| 21 | P | B | 0.0000 | |
| 22 | E | B | -0.8211 | |
| 23 | V | B | 0.0000 | |
| 24 | T | B | 0.1775 | |
| 25 | C | B | 0.0000 | |
| 26 | V | B | 0.0000 | |
| 27 | V | B | 0.0000 | |
| 28 | V | B | -0.6563 | |
| 29 | D | B | -1.3185 | |
| 30 | V | B | 0.0000 | |
| 31 | S | B | -2.0511 | |
| 32 | H | B | -2.6283 | |
| 33 | E | B | -3.0284 | |
| 34 | D | B | -2.7175 | |
| 35 | P | B | -2.7842 | |
| 36 | E | B | -3.1740 | |
| 37 | V | B | -2.0488 | |
| 38 | K | B | -2.2472 | |
| 39 | F | B | -1.2307 | |
| 40 | N | B | -1.2150 | |
| 41 | W | B | 0.0000 | |
| 42 | Y | B | -0.6512 | |
| 43 | V | B | -0.8290 | |
| 44 | D | B | -2.0092 | |
| 45 | G | B | -0.8417 | |
| 46 | V | B | 0.5812 | |
| 47 | E | B | -0.7465 | |
| 48 | V | B | -0.5916 | |
| 49 | H | B | -1.9049 | |
| 50 | N | B | -2.1904 | |
| 51 | A | B | -1.8563 | |
| 52 | K | B | -2.4337 | |
| 53 | T | B | -1.9445 | |
| 54 | K | B | -2.2275 | |
| 55 | P | B | -2.2848 | |
| 56 | R | B | -3.3851 | |
| 57 | E | B | -3.2129 | |
| 58 | E | B | -3.1106 | |
| 59 | Q | B | -1.4745 | |
| 60 | Y | B | 0.2911 | |
| 61 | N | B | -0.5679 | |
| 62 | S | B | -0.9453 | |
| 63 | T | B | -1.8151 | |
| 64 | Y | B | 0.0000 | |
| 65 | R | B | -2.2233 | |
| 66 | V | B | 0.0000 | |
| 67 | V | B | 0.0000 | |
| 68 | S | B | 0.0000 | |
| 69 | V | B | 0.0000 | |
| 70 | L | B | 0.0000 | |
| 71 | T | B | -0.5435 | |
| 72 | V | B | 0.0000 | |
| 73 | L | B | 0.6864 | |
| 74 | H | B | 0.0000 | |
| 75 | Q | B | -1.1682 | |
| 76 | D | B | -1.4573 | |
| 77 | W | B | 0.0000 | |
| 78 | L | B | -1.0106 | |
| 79 | N | B | -2.0951 | |
| 80 | G | B | -2.0901 | |
| 81 | K | B | -2.1307 | |
| 82 | E | B | -1.9773 | |
| 83 | Y | B | 0.0000 | |
| 84 | K | B | -1.7123 | |
| 85 | C | B | 0.0000 | |
| 86 | K | B | -1.6837 | |
| 87 | V | B | 0.0000 | |
| 88 | S | B | -1.4810 | |
| 89 | N | B | 0.0000 | |
| 90 | K | B | -2.5656 | |
| 91 | A | B | -1.4681 | |
| 92 | L | B | -0.5888 | |
| 93 | P | B | -0.4455 | |
| 94 | A | B | -0.4125 | |
| 95 | P | B | -0.8755 | |
| 96 | I | B | -0.6776 | |
| 97 | E | B | -2.2050 | |
| 98 | K | B | -1.4692 | |
| 99 | T | B | -1.1211 | |
| 100 | I | B | -0.2345 | |
| 101 | S | B | -1.1259 | |
| 102 | K | B | -1.2531 | |
| 103 | A | B | -1.1561 | |
| 104 | K | B | -2.3528 | |
| 105 | G | B | -1.9750 | |
| 106 | Q | B | -2.1308 | |
| 107 | P | B | -1.7646 | |
| 108 | R | B | -2.0163 | |
| 109 | E | B | -2.5888 | |
| 110 | P | B | 0.0000 | |
| 111 | Q | B | -1.0156 | |
| 112 | V | B | 0.0000 | |
| 113 | Y | B | 0.0000 | |
| 114 | T | B | -0.0115 | |
| 115 | L | B | 0.0000 | |
| 116 | P | B | -0.3551 | |
| 117 | P | B | -0.3051 | |
| 118 | S | B | 0.1389 | |
| 119 | W | B | 0.6138 | |
| 120 | R | B | -0.3746 | |
| 121 | E | B | 0.0000 | |
| 122 | R | B | -1.5125 | |
| 123 | T | B | -1.2566 | |
| 124 | K | B | -2.4660 | |
| 125 | E | B | -3.3022 | |
| 126 | E | B | -2.9120 | |
| 127 | V | B | 0.0000 | |
| 128 | S | B | 0.0000 | |
| 129 | L | B | 0.0000 | |
| 130 | T | B | 0.0000 | |
| 131 | C | B | 0.0000 | |
| 132 | L | B | 0.0000 | |
| 133 | V | B | 0.0000 | |
| 134 | K | B | 0.0000 | |
| 135 | G | B | -0.8367 | |
| 136 | F | B | 0.0000 | |
| 137 | Y | B | -0.9715 | |
| 138 | P | B | 0.0000 | |
| 139 | S | B | -0.1299 | |
| 140 | D | B | -1.0653 | |
| 141 | I | B | 0.0000 | |
| 142 | A | B | -0.6066 | |
| 143 | V | B | 0.0000 | |
| 144 | W | B | 0.0000 | |
| 145 | W | B | 0.0000 | |
| 146 | W | B | -1.6965 | |
| 147 | S | B | 0.0000 | |
| 148 | E | B | -3.0137 | |
| 149 | G | B | -2.4112 | |
| 150 | E | B | -2.8660 | |
| 151 | P | B | -2.0052 | |
| 152 | E | B | -1.9065 | |
| 153 | N | B | -1.9741 | |
| 154 | N | B | -1.4007 | |
| 155 | Y | B | -0.7992 | |
| 156 | K | B | -0.6268 | |
| 157 | T | B | -0.1449 | |
| 158 | T | B | 0.0000 | |
| 159 | P | B | -0.1085 | |
| 160 | P | B | 0.2418 | |
| 161 | V | B | 0.6900 | |
| 162 | L | B | 1.0903 | |
| 163 | D | B | -0.3270 | |
| 164 | S | B | -1.0801 | |
| 165 | D | B | -1.8323 | |
| 166 | G | B | -0.7748 | |
| 167 | S | B | 0.0000 | |
| 168 | F | B | 0.3573 | |
| 169 | F | B | 0.0000 | |
| 170 | L | B | 0.0000 | |
| 171 | Y | B | 0.0000 | |
| 172 | S | B | 0.0000 | |
| 173 | K | B | 0.0000 | |
| 174 | L | B | 0.0000 | |
| 175 | T | B | 0.0000 | |
| 176 | V | B | 0.0000 | |
| 177 | E | B | -2.8081 | |
| 178 | A | B | 0.0000 | |
| 179 | E | B | -3.6756 | |
| 180 | E | B | -3.1435 | |
| 181 | W | B | 0.0000 | |
| 182 | W | B | -2.1887 | |
| 183 | E | B | -2.9941 | |
| 184 | G | B | -2.3721 | |
| 185 | E | B | -2.6791 | |
| 186 | R | B | -2.2603 | |
| 187 | F | B | 0.0000 | |
| 188 | R | B | -1.0186 | |
| 189 | C | B | 0.0000 | |
| 190 | R | B | -0.6251 | |
| 191 | V | B | 0.0000 | |
| 192 | M | B | 0.0000 | |
| 193 | H | B | 0.0000 | |
| 194 | E | B | -1.1078 | |
| 195 | A | B | -1.5761 | |
| 196 | L | B | 0.0000 | |
| 197 | H | B | -1.8352 | |
| 198 | N | B | -1.6834 | |
| 199 | H | B | -1.0099 | |
| 200 | Y | B | -0.6324 | |
| 201 | T | B | -0.8737 | |
| 202 | R | B | -1.0349 | |
| 203 | W | B | -0.0736 | |
| 204 | W | B | 0.1045 | |
| 205 | L | B | 0.0000 | |
| 206 | R | B | -1.8016 | |
| 207 | R | B | -2.0378 | |
| 208 | S | B | -1.3114 | |
| 209 | P | B | -1.5043 | |
| 210 | G | B | -1.6262 | |
| 211 | K | B | -2.2399 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine