| Chain sequence(s) |
A: TDICKLPKDEGTCRDFILKWYYDPNTKSCARFWYGGCGGNENKFGSQKECEKVCA
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:26)
[INFO] Main: Simulation completed successfully. (00:01:27)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 2 | T | A | -0.7777 | |
| 3 | D | A | -2.1687 | |
| 4 | I | A | -1.1151 | |
| 5 | C | A | 0.0000 | |
| 6 | K | A | -2.4624 | |
| 7 | L | A | -1.4730 | |
| 8 | P | A | -1.5500 | |
| 9 | K | A | -2.3687 | |
| 10 | D | A | -2.3750 | |
| 11 | E | A | -1.9147 | |
| 12 | G | A | -1.5519 | |
| 13 | T | A | -1.0010 | |
| 14 | C | A | -1.0932 | |
| 15 | R | A | -1.8637 | |
| 16 | D | A | -1.3117 | |
| 17 | F | A | 1.1765 | |
| 18 | I | A | 1.7617 | |
| 19 | L | A | 1.1774 | |
| 20 | K | A | -0.1820 | |
| 21 | W | A | -1.3260 | |
| 22 | Y | A | -1.5250 | |
| 23 | Y | A | 0.0000 | |
| 24 | D | A | -1.6680 | |
| 25 | P | A | -1.9094 | |
| 26 | N | A | -2.1767 | |
| 27 | T | A | -1.6380 | |
| 28 | K | A | -2.3224 | |
| 29 | S | A | -1.4221 | |
| 30 | C | A | -1.5451 | |
| 31 | A | A | -1.4755 | |
| 32 | R | A | -1.7805 | |
| 33 | F | A | 0.0000 | |
| 34 | W | A | 0.9110 | |
| 35 | Y | A | -0.1776 | |
| 36 | G | A | 0.0000 | |
| 37 | G | A | -0.6738 | |
| 38 | C | A | -0.8295 | |
| 39 | G | A | -0.9955 | |
| 40 | G | A | -1.8839 | |
| 41 | N | A | -1.7904 | |
| 42 | E | A | -2.3781 | |
| 43 | N | A | 0.0000 | |
| 44 | K | A | -1.7976 | |
| 45 | F | A | -1.3598 | |
| 46 | G | A | -1.2246 | |
| 47 | S | A | -2.0601 | |
| 48 | Q | A | -3.1151 | |
| 49 | K | A | -3.3929 | |
| 50 | E | A | -3.0528 | |
| 51 | C | A | 0.0000 | |
| 52 | E | A | -2.4501 | |
| 53 | K | A | -2.4031 | |
| 54 | V | A | -0.1720 | |
| 55 | C | A | -0.7848 | |
| 56 | A | A | -1.0469 |