| Chain sequence(s) |
A: LPAPKNLVVSRVTEDSARLSWTAPDAAFDSFAIAYPEWPPQGEAIVLTVPGSERSYDLTGLKPGTEYFVVIYGVKGGSYSAPLSAIFTT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:41)
[INFO] Main: Simulation completed successfully. (00:00:42)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | L | A | 1.4200 | |
| 2 | P | A | 0.3314 | |
| 3 | A | A | 0.0703 | |
| 4 | P | A | 0.0000 | |
| 5 | K | A | -2.1192 | |
| 6 | N | A | -1.5467 | |
| 7 | L | A | -0.1708 | |
| 8 | V | A | 1.2714 | |
| 9 | V | A | 0.7314 | |
| 10 | S | A | -0.5697 | |
| 11 | R | A | -1.8202 | |
| 12 | V | A | -0.9487 | |
| 13 | T | A | -1.6792 | |
| 14 | E | A | -2.7060 | |
| 15 | D | A | -2.4724 | |
| 16 | S | A | -1.9509 | |
| 17 | A | A | 0.0000 | |
| 18 | R | A | -1.1841 | |
| 19 | L | A | 0.0000 | |
| 20 | S | A | -0.3450 | |
| 21 | W | A | 0.0000 | |
| 22 | T | A | -1.3140 | |
| 23 | A | A | -1.4369 | |
| 24 | P | A | -1.4046 | |
| 25 | D | A | -2.2613 | |
| 26 | A | A | -1.4192 | |
| 27 | A | A | -1.0044 | |
| 28 | F | A | 0.0000 | |
| 29 | D | A | -2.4961 | |
| 30 | S | A | -1.2407 | |
| 31 | F | A | 0.0000 | |
| 32 | A | A | 0.0000 | |
| 33 | I | A | 0.0000 | |
| 34 | A | A | 0.0000 | |
| 35 | Y | A | 1.0569 | |
| 36 | P | A | -0.1002 | |
| 37 | E | A | -0.8083 | |
| 38 | W | A | 0.1575 | |
| 39 | P | A | -0.4805 | |
| 40 | P | A | -1.2792 | |
| 41 | Q | A | -1.9272 | |
| 42 | G | A | -1.8515 | |
| 43 | E | A | -1.8268 | |
| 44 | A | A | -0.1388 | |
| 45 | I | A | 1.5302 | |
| 46 | V | A | 2.2472 | |
| 47 | L | A | 1.3321 | |
| 48 | T | A | 0.4055 | |
| 49 | V | A | 0.0000 | |
| 50 | P | A | -1.1055 | |
| 51 | G | A | 0.0000 | |
| 52 | S | A | -1.5853 | |
| 53 | E | A | -1.4587 | |
| 54 | R | A | -1.1374 | |
| 55 | S | A | -0.6089 | |
| 56 | Y | A | -0.7311 | |
| 57 | D | A | -1.7244 | |
| 58 | L | A | 0.0000 | |
| 59 | T | A | -1.3791 | |
| 60 | G | A | -1.4137 | |
| 61 | L | A | 0.0000 | |
| 62 | K | A | -2.8408 | |
| 63 | P | A | -2.3759 | |
| 64 | G | A | -1.6942 | |
| 65 | T | A | -1.5078 | |
| 66 | E | A | -0.5294 | |
| 67 | Y | A | 0.0000 | |
| 68 | F | A | 1.1272 | |
| 69 | V | A | 0.0000 | |
| 70 | V | A | 0.8807 | |
| 71 | I | A | 0.0000 | |
| 72 | Y | A | 0.7154 | |
| 73 | G | A | 0.0000 | |
| 74 | V | A | -0.2560 | |
| 75 | K | A | -1.2629 | |
| 76 | G | A | -1.2985 | |
| 77 | G | A | -0.9232 | |
| 78 | S | A | 0.0145 | |
| 79 | Y | A | 1.2746 | |
| 80 | S | A | 0.0000 | |
| 81 | A | A | 0.6143 | |
| 82 | P | A | -0.0120 | |
| 83 | L | A | -0.3642 | |
| 84 | S | A | 0.4129 | |
| 85 | A | A | 1.3924 | |
| 86 | I | A | 2.3039 | |
| 87 | F | A | 0.0000 | |
| 88 | T | A | -0.3956 | |
| 89 | T | A | -1.7040 |