| Chain sequence(s) |
A: VSDVPRDLEVVAATPTSLLISWDAPAVTVRYYRITYGETGGNSPVQEFTVPGSKSTATISGLKPGVDYTITVYAVTGGIAELLRSKPISINYRT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:40)
[INFO] Main: Simulation completed successfully. (00:00:41)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | V | A | 1.6197 | |
| 2 | S | A | 0.0575 | |
| 3 | D | A | -0.7560 | |
| 4 | V | A | -1.1662 | |
| 5 | P | A | 0.0000 | |
| 6 | R | A | -3.1561 | |
| 7 | D | A | -3.3904 | |
| 8 | L | A | 0.0000 | |
| 9 | E | A | -2.1055 | |
| 10 | V | A | 0.1137 | |
| 11 | V | A | 1.5452 | |
| 12 | A | A | 0.9028 | |
| 13 | A | A | 0.3253 | |
| 14 | T | A | -0.5245 | |
| 15 | P | A | -1.1224 | |
| 16 | T | A | -1.0013 | |
| 17 | S | A | -0.5298 | |
| 18 | L | A | 0.0000 | |
| 19 | L | A | 0.7526 | |
| 20 | I | A | 0.0000 | |
| 21 | S | A | -1.1377 | |
| 22 | W | A | 0.0000 | |
| 23 | D | A | -3.2198 | |
| 24 | A | A | -1.6740 | |
| 25 | P | A | -0.5399 | |
| 26 | A | A | 0.2827 | |
| 27 | V | A | 0.3760 | |
| 28 | T | A | -0.3562 | |
| 29 | V | A | -0.9667 | |
| 30 | R | A | -1.4573 | |
| 31 | Y | A | -1.1131 | |
| 32 | Y | A | 0.0000 | |
| 33 | R | A | -0.6666 | |
| 34 | I | A | 0.0000 | |
| 35 | T | A | -0.5439 | |
| 36 | Y | A | 0.0000 | |
| 37 | G | A | 0.0000 | |
| 38 | E | A | -1.5402 | |
| 39 | T | A | -1.2332 | |
| 40 | G | A | -1.2264 | |
| 41 | G | A | -1.4067 | |
| 42 | N | A | -1.5504 | |
| 43 | S | A | -0.8716 | |
| 44 | P | A | -0.3310 | |
| 45 | V | A | 0.4208 | |
| 46 | Q | A | -0.8482 | |
| 47 | E | A | -1.6143 | |
| 48 | F | A | -0.6179 | |
| 49 | T | A | -0.2280 | |
| 50 | V | A | 0.0000 | |
| 51 | P | A | -1.0860 | |
| 52 | G | A | -1.3112 | |
| 53 | S | A | -1.3381 | |
| 54 | K | A | -2.1671 | |
| 55 | S | A | -1.3940 | |
| 56 | T | A | -0.7627 | |
| 57 | A | A | 0.0000 | |
| 58 | T | A | 0.2395 | |
| 59 | I | A | 0.0000 | |
| 60 | S | A | -0.6611 | |
| 61 | G | A | -1.0286 | |
| 62 | L | A | 0.0000 | |
| 63 | K | A | -2.3610 | |
| 64 | P | A | -1.6566 | |
| 65 | G | A | -1.4360 | |
| 66 | V | A | -1.3789 | |
| 67 | D | A | -2.0365 | |
| 68 | Y | A | 0.0000 | |
| 69 | T | A | -0.7917 | |
| 70 | I | A | 0.0000 | |
| 71 | T | A | -0.3630 | |
| 72 | V | A | 0.0000 | |
| 73 | Y | A | -0.7486 | |
| 74 | A | A | 0.0000 | |
| 75 | V | A | 0.0000 | |
| 76 | T | A | -0.5275 | |
| 77 | G | A | 0.0013 | |
| 78 | G | A | 0.2036 | |
| 79 | I | A | 1.5739 | |
| 80 | A | A | 0.3788 | |
| 81 | E | A | -0.6399 | |
| 82 | L | A | 0.6504 | |
| 83 | L | A | -0.1490 | |
| 84 | R | A | -1.6110 | |
| 85 | S | A | 0.0000 | |
| 86 | K | A | -2.0793 | |
| 87 | P | A | -1.2733 | |
| 88 | I | A | -0.6472 | |
| 89 | S | A | -0.8763 | |
| 90 | I | A | -0.7477 | |
| 91 | N | A | -1.7103 | |
| 92 | Y | A | -1.4116 | |
| 93 | R | A | -2.4875 | |
| 94 | T | A | -1.6084 |