| Chain sequence(s) |
A: MSHHHHHHSGKVIDAVIKPLKGDITSAWEVWHLGWNADWTMYEHHKDMRREAKKNPSFNAVVVDEIYYEVQRYMNKMLRKDYEEFKKNKKVVIRGAYNGVIMFWAIRQVMTGKMTPPEAITYFLMHLDPKMSAADRVEAIVFFKDMIVVVVVKMQTPENAKKNS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:04:47)
[INFO] Main: Simulation completed successfully. (00:04:48)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.5599 | |
| 2 | S | A | -0.6329 | |
| 3 | H | A | -1.7462 | |
| 4 | H | A | -2.3375 | |
| 5 | H | A | -2.6216 | |
| 6 | H | A | -2.4846 | |
| 7 | H | A | -2.0693 | |
| 8 | H | A | -1.4695 | |
| 9 | S | A | -1.5131 | |
| 10 | G | A | -1.8501 | |
| 11 | K | A | -2.3903 | |
| 12 | V | A | -1.4252 | |
| 13 | I | A | -1.6499 | |
| 14 | D | A | -2.8752 | |
| 15 | A | A | -1.5570 | |
| 16 | V | A | 0.0000 | |
| 17 | I | A | 0.0000 | |
| 18 | K | A | -2.3954 | |
| 19 | P | A | -1.7049 | |
| 20 | L | A | -1.5751 | |
| 21 | K | A | -2.4422 | |
| 22 | G | A | -2.1151 | |
| 23 | D | A | -1.8513 | |
| 24 | I | A | -0.4288 | |
| 25 | T | A | -0.1692 | |
| 26 | S | A | -0.4589 | |
| 27 | A | A | -0.3665 | |
| 28 | W | A | -0.4009 | |
| 29 | E | A | -0.9460 | |
| 30 | V | A | 0.0000 | |
| 31 | W | A | -0.0778 | |
| 32 | H | A | -0.2409 | |
| 33 | L | A | 0.0000 | |
| 34 | G | A | 0.0000 | |
| 35 | W | A | -1.1967 | |
| 36 | N | A | -1.7435 | |
| 37 | A | A | -0.6472 | |
| 38 | D | A | -0.2467 | |
| 39 | W | A | 0.5775 | |
| 40 | T | A | 0.1117 | |
| 41 | M | A | 0.0000 | |
| 42 | Y | A | -0.1941 | |
| 43 | E | A | -1.4894 | |
| 44 | H | A | -1.3346 | |
| 45 | H | A | 0.0000 | |
| 46 | K | A | -2.8126 | |
| 47 | D | A | -3.1153 | |
| 48 | M | A | 0.0000 | |
| 49 | R | A | -3.1656 | |
| 50 | R | A | -4.0193 | |
| 51 | E | A | -3.1148 | |
| 52 | A | A | 0.0000 | |
| 53 | K | A | -3.8720 | |
| 54 | K | A | -3.3435 | |
| 55 | N | A | -2.3203 | |
| 56 | P | A | -1.6216 | |
| 57 | S | A | -1.1133 | |
| 58 | F | A | -1.1175 | |
| 59 | N | A | -1.1019 | |
| 60 | A | A | -0.9125 | |
| 61 | V | A | 0.6061 | |
| 62 | V | A | 0.0117 | |
| 63 | V | A | 0.0000 | |
| 64 | D | A | -0.4027 | |
| 65 | E | A | -0.9108 | |
| 66 | I | A | 0.0000 | |
| 67 | Y | A | -0.0297 | |
| 68 | Y | A | 0.0046 | |
| 69 | E | A | -0.8658 | |
| 70 | V | A | 0.0000 | |
| 71 | Q | A | -1.1749 | |
| 72 | R | A | -2.0344 | |
| 73 | Y | A | -1.1410 | |
| 74 | M | A | 0.0000 | |
| 75 | N | A | 0.0000 | |
| 76 | K | A | -2.8014 | |
| 77 | M | A | -1.8935 | |
| 78 | L | A | 0.0000 | |
| 79 | R | A | -3.0709 | |
| 80 | K | A | -3.2660 | |
| 81 | D | A | 0.0000 | |
| 82 | Y | A | -2.2549 | |
| 83 | E | A | -4.0468 | |
| 84 | E | A | -3.8634 | |
| 85 | F | A | -3.5270 | |
| 86 | K | A | -4.0072 | |
| 87 | K | A | -4.2486 | |
| 88 | N | A | -4.0346 | |
| 89 | K | A | -3.8359 | |
| 90 | K | A | -2.7076 | |
| 91 | V | A | 0.0000 | |
| 92 | V | A | 0.2604 | |
| 93 | I | A | 0.0000 | |
| 94 | R | A | -2.0236 | |
| 95 | G | A | 0.0000 | |
| 96 | A | A | 0.0000 | |
| 97 | Y | A | -0.1215 | |
| 98 | N | A | 0.0438 | |
| 99 | G | A | 0.6875 | |
| 100 | V | A | 1.9859 | |
| 101 | I | A | 1.1782 | |
| 102 | M | A | 0.0000 | |
| 103 | F | A | 0.6395 | |
| 104 | W | A | 0.8251 | |
| 105 | A | A | 0.0000 | |
| 106 | I | A | 0.0000 | |
| 107 | R | A | -1.5240 | |
| 108 | Q | A | -1.5483 | |
| 109 | V | A | 0.0000 | |
| 110 | M | A | -1.1228 | |
| 111 | T | A | -1.2450 | |
| 112 | G | A | -1.4802 | |
| 113 | K | A | -2.3009 | |
| 114 | M | A | -1.4828 | |
| 115 | T | A | -1.0461 | |
| 116 | P | A | -1.0042 | |
| 117 | P | A | -1.0763 | |
| 118 | E | A | -1.7013 | |
| 119 | A | A | 0.0000 | |
| 120 | I | A | -0.3857 | |
| 121 | T | A | -0.1387 | |
| 122 | Y | A | 0.3688 | |
| 123 | F | A | 0.0000 | |
| 124 | L | A | 0.4314 | |
| 125 | M | A | 0.8114 | |
| 126 | H | A | -0.4307 | |
| 127 | L | A | 0.0000 | |
| 128 | D | A | -1.6782 | |
| 129 | P | A | -1.5053 | |
| 130 | K | A | -2.0831 | |
| 131 | M | A | -1.2328 | |
| 132 | S | A | -0.7465 | |
| 133 | A | A | -0.5089 | |
| 134 | A | A | -0.6167 | |
| 135 | D | A | -1.4120 | |
| 136 | R | A | -1.9728 | |
| 137 | V | A | -1.2172 | |
| 138 | E | A | -1.5184 | |
| 139 | A | A | -0.5891 | |
| 140 | I | A | 0.2056 | |
| 141 | V | A | 0.9944 | |
| 142 | F | A | 0.7682 | |
| 143 | F | A | 0.1897 | |
| 144 | K | A | -1.4463 | |
| 145 | D | A | -0.9302 | |
| 146 | M | A | -0.1195 | |
| 147 | I | A | 0.0000 | |
| 148 | V | A | 0.0000 | |
| 149 | V | A | 0.0000 | |
| 150 | V | A | 0.0000 | |
| 151 | V | A | 0.0000 | |
| 152 | V | A | 0.0000 | |
| 153 | K | A | -1.4644 | |
| 154 | M | A | -0.7415 | |
| 155 | Q | A | -1.7397 | |
| 156 | T | A | -1.7243 | |
| 157 | P | A | -2.2588 | |
| 158 | E | A | -3.7274 | |
| 159 | N | A | -3.8129 | |
| 160 | A | A | -3.1778 | |
| 161 | K | A | -4.0883 | |
| 162 | K | A | -4.0341 | |
| 163 | N | A | -3.1836 | |
| 164 | S | A | -2.0582 |