| Chain sequence(s) |
A: DVFATITNKLKNYIDNNIATITKDQLKTEFDNLVAANQDAIDERTLNTAKTIIEMYKAGALNDMTFASQEIEDATKAGDAVKLANILKTNVLTKIFNDALNYFDEKKAALIKADHVSTYAAFVQTHRPTGEFMFEFDEDEMFYVDLDKKETVWHLEEFGQAFSFEAQGGLANIAILNNNLNTLIQRSNHTQATNDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGELVTEGVAESLFLPRTDYSFHKFHYLTFVPSAEDFYDCRVEHWGLDQPLLKHWEAQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:06:14)
[INFO] Main: Simulation completed successfully. (00:06:17)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | D | A | -1.8193 | |
| 2 | V | A | -0.9840 | |
| 3 | F | A | 0.0000 | |
| 4 | A | A | -1.2433 | |
| 5 | T | A | -1.3342 | |
| 6 | I | A | 0.0000 | |
| 7 | T | A | -1.5942 | |
| 8 | N | A | -2.5289 | |
| 9 | K | A | -2.8868 | |
| 10 | L | A | 0.0000 | |
| 11 | K | A | -2.6098 | |
| 12 | N | A | -3.0340 | |
| 13 | Y | A | -1.9744 | |
| 14 | I | A | 0.0000 | |
| 15 | D | A | -2.4062 | |
| 16 | N | A | -2.2004 | |
| 17 | N | A | -1.4565 | |
| 18 | I | A | -0.9092 | |
| 19 | A | A | -0.2175 | |
| 20 | T | A | -0.3779 | |
| 21 | I | A | 0.0000 | |
| 22 | T | A | -1.8705 | |
| 23 | K | A | -3.2881 | |
| 24 | D | A | -3.4207 | |
| 25 | Q | A | -2.8913 | |
| 26 | L | A | 0.0000 | |
| 27 | K | A | -2.7533 | |
| 28 | T | A | -2.3638 | |
| 29 | E | A | -2.2474 | |
| 30 | F | A | 0.0000 | |
| 31 | D | A | -2.0209 | |
| 32 | N | A | -2.0737 | |
| 33 | L | A | -1.3682 | |
| 34 | V | A | -1.1178 | |
| 35 | A | A | -1.3249 | |
| 36 | A | A | -1.0427 | |
| 37 | N | A | -1.6830 | |
| 38 | Q | A | -2.9496 | |
| 39 | D | A | -3.5310 | |
| 40 | A | A | -2.6571 | |
| 41 | I | A | 0.0000 | |
| 42 | D | A | -3.8274 | |
| 43 | E | A | -3.5216 | |
| 44 | R | A | -2.4870 | |
| 45 | T | A | 0.0000 | |
| 46 | L | A | -1.4798 | |
| 47 | N | A | -1.5129 | |
| 48 | T | A | 0.0000 | |
| 49 | A | A | 0.0000 | |
| 50 | K | A | -1.1621 | |
| 51 | T | A | -1.0639 | |
| 52 | I | A | 0.0000 | |
| 53 | I | A | 0.0000 | |
| 54 | E | A | -1.5243 | |
| 55 | M | A | 0.0000 | |
| 56 | Y | A | -1.3189 | |
| 57 | K | A | -2.1884 | |
| 58 | A | A | -1.1725 | |
| 59 | G | A | -1.1632 | |
| 60 | A | A | -0.8772 | |
| 61 | L | A | 0.0000 | |
| 62 | N | A | -2.2946 | |
| 63 | D | A | -2.6729 | |
| 64 | M | A | 0.0000 | |
| 65 | T | A | -0.9673 | |
| 66 | F | A | -0.8063 | |
| 67 | A | A | -0.5835 | |
| 68 | S | A | -1.4583 | |
| 69 | Q | A | -2.6408 | |
| 70 | E | A | -3.3646 | |
| 71 | I | A | 0.0000 | |
| 72 | E | A | -2.5379 | |
| 73 | D | A | -3.5793 | |
| 74 | A | A | 0.0000 | |
| 75 | T | A | 0.0000 | |
| 76 | K | A | -2.8453 | |
| 77 | A | A | -1.7363 | |
| 78 | G | A | -1.6773 | |
| 79 | D | A | -1.2467 | |
| 80 | A | A | -0.4174 | |
| 81 | V | A | 0.2412 | |
| 82 | K | A | -1.5583 | |
| 83 | L | A | 0.0000 | |
| 84 | A | A | 0.0000 | |
| 85 | N | A | -1.6512 | |
| 86 | I | A | -1.0752 | |
| 87 | L | A | 0.0000 | |
| 88 | K | A | -1.6816 | |
| 89 | T | A | -0.8717 | |
| 90 | N | A | -1.1222 | |
| 91 | V | A | 0.0000 | |
| 92 | L | A | -1.0033 | |
| 93 | T | A | -1.1839 | |
| 94 | K | A | -2.1604 | |
| 95 | I | A | 0.0000 | |
| 96 | F | A | -1.4929 | |
| 97 | N | A | -2.2185 | |
| 98 | D | A | -2.9955 | |
| 99 | A | A | 0.0000 | |
| 100 | L | A | -2.5142 | |
| 101 | N | A | -3.0629 | |
| 102 | Y | A | -2.4345 | |
| 103 | F | A | -2.5502 | |
| 104 | D | A | -3.5555 | |
| 105 | E | A | -3.0032 | |
| 106 | K | A | -1.8785 | |
| 107 | K | A | -1.4678 | |
| 108 | A | A | -0.8722 | |
| 109 | A | A | -0.1872 | |
| 110 | L | A | 1.1314 | |
| 211 | I | A | 1.1228 | |
| 212 | K | A | -1.1173 | |
| 213 | A | A | -0.9205 | |
| 214 | D | A | -1.9974 | |
| 215 | H | A | -1.6573 | |
| 216 | V | A | -0.1031 | |
| 217 | S | A | -0.3483 | |
| 218 | T | A | 0.0805 | |
| 219 | Y | A | 0.7055 | |
| 220 | A | A | 0.2812 | |
| 221 | A | A | 0.1756 | |
| 222 | F | A | -0.0254 | |
| 223 | V | A | 0.0000 | |
| 224 | Q | A | -0.7769 | |
| 225 | T | A | -0.8051 | |
| 226 | H | A | -1.3050 | |
| 227 | R | A | -2.1541 | |
| 228 | P | A | -1.1036 | |
| 229 | T | A | -0.9337 | |
| 230 | G | A | 0.0000 | |
| 231 | E | A | -0.2325 | |
| 232 | F | A | 0.0000 | |
| 233 | M | A | 0.0000 | |
| 234 | F | A | 0.0000 | |
| 235 | E | A | -1.2504 | |
| 236 | F | A | 0.0000 | |
| 237 | D | A | -2.4058 | |
| 238 | E | A | -3.1129 | |
| 239 | D | A | -2.9068 | |
| 240 | E | A | 0.0000 | |
| 241 | M | A | 0.0000 | |
| 242 | F | A | 0.0000 | |
| 243 | Y | A | 0.1140 | |
| 244 | V | A | 0.0000 | |
| 245 | D | A | -2.1243 | |
| 246 | L | A | -2.3471 | |
| 247 | D | A | -3.3902 | |
| 248 | K | A | -3.8912 | |
| 249 | K | A | -4.0462 | |
| 250 | E | A | -3.6844 | |
| 251 | T | A | -1.6966 | |
| 252 | V | A | -0.4667 | |
| 253 | W | A | -0.2556 | |
| 254 | H | A | -0.7019 | |
| 255 | L | A | -0.7770 | |
| 256 | E | A | -1.6963 | |
| 257 | E | A | 0.0000 | |
| 258 | F | A | 0.0000 | |
| 259 | G | A | -0.4796 | |
| 260 | Q | A | -0.7369 | |
| 261 | A | A | 0.0000 | |
| 262 | F | A | 0.0000 | |
| 263 | S | A | -0.6611 | |
| 264 | F | A | -1.4370 | |
| 265 | E | A | -2.7170 | |
| 266 | A | A | -2.5085 | |
| 267 | Q | A | -2.4383 | |
| 268 | G | A | -1.3807 | |
| 269 | G | A | 0.0000 | |
| 270 | L | A | -0.9663 | |
| 271 | A | A | -0.1887 | |
| 272 | N | A | -0.3875 | |
| 273 | I | A | 0.0000 | |
| 274 | A | A | 0.1121 | |
| 275 | I | A | 0.7992 | |
| 276 | L | A | -0.2319 | |
| 277 | N | A | -1.3329 | |
| 278 | N | A | -1.6526 | |
| 279 | N | A | -1.3722 | |
| 280 | L | A | -0.8969 | |
| 281 | N | A | -2.1154 | |
| 282 | T | A | -1.4358 | |
| 283 | L | A | -0.9361 | |
| 284 | I | A | -1.6530 | |
| 285 | Q | A | -2.5695 | |
| 286 | R | A | -2.7128 | |
| 287 | S | A | -2.1624 | |
| 288 | N | A | -2.6074 | |
| 289 | H | A | -2.4151 | |
| 290 | T | A | -1.6968 | |
| 291 | Q | A | -1.6274 | |
| 292 | A | A | -0.8418 | |
| 293 | T | A | -0.8288 | |
| 294 | N | A | -1.1028 | |
| 295 | D | A | -2.1867 | |
| 296 | P | A | -1.7923 | |
| 297 | P | A | 0.0000 | |
| 298 | E | A | -2.4726 | |
| 299 | V | A | 0.0000 | |
| 300 | T | A | -0.4320 | |
| 301 | V | A | 0.0000 | |
| 302 | F | A | 0.0240 | |
| 303 | P | A | -1.0894 | |
| 304 | K | A | -2.3354 | |
| 305 | E | A | -2.9361 | |
| 306 | P | A | -1.8023 | |
| 307 | V | A | -1.4214 | |
| 308 | E | A | -1.5762 | |
| 309 | L | A | 0.4425 | |
| 310 | G | A | -0.1120 | |
| 311 | Q | A | -1.1944 | |
| 312 | P | A | -0.5472 | |
| 313 | N | A | 0.0000 | |
| 314 | T | A | -0.4327 | |
| 315 | L | A | 0.0000 | |
| 316 | I | A | 0.0000 | |
| 317 | C | A | 0.0000 | |
| 318 | H | A | -0.3786 | |
| 319 | I | A | 0.0000 | |
| 320 | D | A | -1.6032 | |
| 321 | K | A | -2.0691 | |
| 322 | F | A | 0.0000 | |
| 323 | F | A | -0.2971 | |
| 324 | P | A | 0.0000 | |
| 325 | P | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | L | A | 0.0000 | |
| 328 | N | A | -1.4640 | |
| 329 | V | A | -0.9137 | |
| 330 | T | A | -0.1381 | |
| 331 | W | A | 0.0000 | |
| 332 | L | A | -0.4098 | |
| 333 | C | A | -0.5983 | |
| 334 | N | A | -1.6116 | |
| 335 | G | A | -1.3526 | |
| 336 | E | A | -1.5345 | |
| 337 | L | A | 0.2206 | |
| 338 | V | A | 0.0623 | |
| 339 | T | A | -0.4779 | |
| 340 | E | A | -1.4303 | |
| 341 | G | A | -0.5194 | |
| 342 | V | A | 0.0153 | |
| 343 | A | A | -0.5023 | |
| 344 | E | A | -1.3192 | |
| 345 | S | A | -0.6881 | |
| 346 | L | A | -0.1359 | |
| 347 | F | A | -0.0026 | |
| 348 | L | A | 0.0000 | |
| 349 | P | A | -0.5206 | |
| 350 | R | A | -1.1285 | |
| 351 | T | A | -1.0147 | |
| 352 | D | A | -1.4965 | |
| 353 | Y | A | 0.1784 | |
| 354 | S | A | -0.6292 | |
| 355 | F | A | 0.0000 | |
| 356 | H | A | 0.0000 | |
| 357 | K | A | 0.0000 | |
| 358 | F | A | -0.1210 | |
| 359 | H | A | 0.0000 | |
| 360 | Y | A | -0.0363 | |
| 361 | L | A | 0.0000 | |
| 362 | T | A | 0.0113 | |
| 363 | F | A | 0.0000 | |
| 364 | V | A | 1.1581 | |
| 365 | P | A | 0.0000 | |
| 366 | S | A | -0.4438 | |
| 367 | A | A | -0.9813 | |
| 368 | E | A | -2.2778 | |
| 369 | D | A | -1.1068 | |
| 370 | F | A | -0.5394 | |
| 371 | Y | A | 0.0000 | |
| 372 | D | A | -0.9668 | |
| 373 | C | A | 0.0000 | |
| 374 | R | A | -1.2293 | |
| 375 | V | A | 0.0000 | |
| 376 | E | A | -1.9747 | |
| 377 | H | A | 0.0000 | |
| 378 | W | A | -0.3698 | |
| 379 | G | A | -1.0682 | |
| 380 | L | A | -1.3190 | |
| 381 | D | A | -2.2685 | |
| 382 | Q | A | -1.9397 | |
| 383 | P | A | -1.4771 | |
| 384 | L | A | -0.9050 | |
| 385 | L | A | -0.4296 | |
| 386 | K | A | -1.0123 | |
| 387 | H | A | -0.9850 | |
| 388 | W | A | -0.7398 | |
| 389 | E | A | -1.9896 | |
| 390 | A | A | -1.5831 | |
| 391 | Q | A | -1.9330 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine