| Chain sequence(s) |
A: GACLGFGKSCNPSNDQCCKSSSLACSTKHKWCKYEL
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:22)
[INFO] Main: Simulation completed successfully. (00:00:23)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.2523 | |
| 2 | A | A | 0.0844 | |
| 3 | C | A | 0.1103 | |
| 4 | L | A | -0.2916 | |
| 5 | G | A | -0.0840 | |
| 6 | F | A | 0.7165 | |
| 7 | G | A | -0.7448 | |
| 8 | K | A | -1.7951 | |
| 9 | S | A | -1.5360 | |
| 10 | C | A | -2.1830 | |
| 11 | N | A | -2.7617 | |
| 12 | P | A | -2.5927 | |
| 13 | S | A | -1.9186 | |
| 14 | N | A | -2.8530 | |
| 15 | D | A | -3.4114 | |
| 16 | Q | A | -2.6831 | |
| 17 | C | A | -1.4474 | |
| 18 | C | A | -0.9116 | |
| 19 | K | A | -1.9875 | |
| 20 | S | A | -1.1437 | |
| 21 | S | A | -0.7682 | |
| 22 | S | A | -0.9102 | |
| 23 | L | A | 0.0000 | |
| 24 | A | A | -1.4304 | |
| 25 | C | A | -2.3889 | |
| 26 | S | A | -2.1307 | |
| 27 | T | A | -2.1651 | |
| 28 | K | A | -2.6998 | |
| 29 | H | A | -2.7050 | |
| 30 | K | A | -3.4334 | |
| 31 | W | A | -2.0670 | |
| 32 | C | A | 0.0000 | |
| 33 | K | A | -0.6830 | |
| 34 | Y | A | 0.3294 | |
| 35 | E | A | -0.9544 | |
| 36 | L | A | 0.8556 |