Project name: query_structure

Status: done

Started: 2026-03-16 23:16:40
Settings
Chain sequence(s) A: GACLGFGKSCNPSNDQCCKSSSLACSTKHKWCKYEL
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:22)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:23)
Show buried residues

Minimal score value
-3.4334
Maximal score value
0.8556
Average score
-1.3566
Total score value
-48.8374

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -0.2523
2 A A 0.0844
3 C A 0.1103
4 L A -0.2916
5 G A -0.0840
6 F A 0.7165
7 G A -0.7448
8 K A -1.7951
9 S A -1.5360
10 C A -2.1830
11 N A -2.7617
12 P A -2.5927
13 S A -1.9186
14 N A -2.8530
15 D A -3.4114
16 Q A -2.6831
17 C A -1.4474
18 C A -0.9116
19 K A -1.9875
20 S A -1.1437
21 S A -0.7682
22 S A -0.9102
23 L A 0.0000
24 A A -1.4304
25 C A -2.3889
26 S A -2.1307
27 T A -2.1651
28 K A -2.6998
29 H A -2.7050
30 K A -3.4334
31 W A -2.0670
32 C A 0.0000
33 K A -0.6830
34 Y A 0.3294
35 E A -0.9544
36 L A 0.8556
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Laboratory of Theory of Biopolymers 2018