| Chain sequence(s) |
A: MEAGRPRPVLRSVNSREPSQVIFCNRSPRVVLPVWLNFDGEPQPYPTLPPGTGRRIHSYRGHLWLFRDAGTHDGLLVNQTELFVPSLNVDGQPIFANITLPVYTLKERCLQVVRSLVKPENYRRLDIVRSLYEDLEDHPNVQKDLERLTQERIAHQRMGD
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:38)
[INFO] Main: Simulation completed successfully. (00:03:39)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.1301 | |
| 2 | E | A | -1.7344 | |
| 3 | A | A | -1.2690 | |
| 4 | G | A | -2.1116 | |
| 5 | R | A | -2.9728 | |
| 6 | P | A | -2.0836 | |
| 7 | R | A | -2.7366 | |
| 8 | P | A | -1.8228 | |
| 9 | V | A | -0.4937 | |
| 10 | L | A | 0.0000 | |
| 11 | R | A | -1.2129 | |
| 12 | S | A | 0.0000 | |
| 13 | V | A | 0.7221 | |
| 14 | N | A | -1.0800 | |
| 15 | S | A | -1.3811 | |
| 16 | R | A | -2.3426 | |
| 17 | E | A | -1.7956 | |
| 18 | P | A | -1.2988 | |
| 19 | S | A | 0.0000 | |
| 20 | Q | A | -1.1409 | |
| 21 | V | A | 0.0000 | |
| 22 | I | A | -0.6109 | |
| 23 | F | A | 0.0000 | |
| 24 | C | A | 0.0000 | |
| 25 | N | A | 0.0000 | |
| 26 | R | A | -2.2098 | |
| 27 | S | A | 0.0000 | |
| 28 | P | A | -1.0015 | |
| 29 | R | A | -0.9857 | |
| 30 | V | A | -0.2035 | |
| 31 | V | A | 0.0000 | |
| 32 | L | A | 0.0281 | |
| 33 | P | A | 0.0000 | |
| 34 | V | A | 0.0000 | |
| 35 | W | A | -0.4306 | |
| 36 | L | A | 0.0000 | |
| 37 | N | A | -1.1992 | |
| 38 | F | A | -0.8006 | |
| 39 | D | A | -2.4619 | |
| 40 | G | A | -2.0322 | |
| 41 | E | A | -2.8383 | |
| 42 | P | A | -1.7250 | |
| 43 | Q | A | -1.1977 | |
| 44 | P | A | -0.5496 | |
| 45 | Y | A | 0.1151 | |
| 46 | P | A | -0.1206 | |
| 47 | T | A | 0.0529 | |
| 48 | L | A | 0.0000 | |
| 49 | P | A | -0.6454 | |
| 50 | P | A | -1.1086 | |
| 51 | G | A | -1.3170 | |
| 52 | T | A | -0.9453 | |
| 53 | G | A | -1.4118 | |
| 54 | R | A | -1.5763 | |
| 55 | R | A | -2.2281 | |
| 56 | I | A | 0.0000 | |
| 57 | H | A | -1.5257 | |
| 58 | S | A | 0.0000 | |
| 59 | Y | A | -0.7325 | |
| 60 | R | A | -0.8532 | |
| 61 | G | A | 0.1148 | |
| 62 | H | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | W | A | 0.0000 | |
| 65 | L | A | 0.0000 | |
| 66 | F | A | 0.0000 | |
| 67 | R | A | 0.0000 | |
| 68 | D | A | 0.0000 | |
| 69 | A | A | -0.3755 | |
| 70 | G | A | -0.6320 | |
| 71 | T | A | -0.9145 | |
| 72 | H | A | -1.0085 | |
| 73 | D | A | -0.9146 | |
| 74 | G | A | -0.6831 | |
| 75 | L | A | 0.0000 | |
| 76 | L | A | -0.9249 | |
| 77 | V | A | 0.0000 | |
| 78 | N | A | -1.4920 | |
| 79 | Q | A | -1.8443 | |
| 80 | T | A | -1.6278 | |
| 81 | E | A | -2.0318 | |
| 82 | L | A | -0.4050 | |
| 83 | F | A | 0.0000 | |
| 84 | V | A | 1.7890 | |
| 85 | P | A | 0.0000 | |
| 86 | S | A | 0.4228 | |
| 87 | L | A | 0.2281 | |
| 88 | N | A | -0.3348 | |
| 89 | V | A | 0.4686 | |
| 90 | D | A | -1.5175 | |
| 91 | G | A | -1.3737 | |
| 92 | Q | A | -1.3481 | |
| 93 | P | A | -0.5768 | |
| 94 | I | A | 0.4723 | |
| 95 | F | A | 0.4821 | |
| 96 | A | A | 0.0000 | |
| 97 | N | A | -0.9983 | |
| 98 | I | A | 0.0000 | |
| 99 | T | A | -0.7142 | |
| 100 | L | A | 0.3651 | |
| 101 | P | A | 0.7586 | |
| 102 | V | A | 1.8894 | |
| 103 | Y | A | 0.5463 | |
| 104 | T | A | 0.1192 | |
| 105 | L | A | 0.4319 | |
| 106 | K | A | -1.2547 | |
| 107 | E | A | -1.3387 | |
| 108 | R | A | -0.8493 | |
| 109 | C | A | -0.1195 | |
| 110 | L | A | 0.0000 | |
| 111 | Q | A | -0.0152 | |
| 112 | V | A | 1.4365 | |
| 113 | V | A | 0.9946 | |
| 114 | R | A | 0.0168 | |
| 115 | S | A | 0.7315 | |
| 116 | L | A | 1.5609 | |
| 117 | V | A | -0.0760 | |
| 118 | K | A | -2.1396 | |
| 119 | P | A | -2.3901 | |
| 120 | E | A | -3.4415 | |
| 121 | N | A | -3.1444 | |
| 122 | Y | A | 0.0000 | |
| 123 | R | A | -3.8199 | |
| 124 | R | A | -3.3929 | |
| 125 | L | A | -1.8533 | |
| 126 | D | A | -1.9342 | |
| 127 | I | A | -0.1863 | |
| 128 | V | A | 0.7009 | |
| 129 | R | A | -1.7093 | |
| 130 | S | A | -0.9362 | |
| 131 | L | A | -1.2483 | |
| 132 | Y | A | 0.0000 | |
| 133 | E | A | -3.4630 | |
| 134 | D | A | -2.8527 | |
| 135 | L | A | 0.0000 | |
| 136 | E | A | -3.2646 | |
| 137 | D | A | -3.3087 | |
| 138 | H | A | -2.6004 | |
| 139 | P | A | -1.9631 | |
| 140 | N | A | -2.3141 | |
| 141 | V | A | -2.0983 | |
| 142 | Q | A | -3.2658 | |
| 143 | K | A | -3.7751 | |
| 144 | D | A | -3.2583 | |
| 145 | L | A | 0.0000 | |
| 146 | E | A | -4.2068 | |
| 147 | R | A | -4.3053 | |
| 148 | L | A | -2.9679 | |
| 149 | T | A | -2.6295 | |
| 150 | Q | A | -3.3306 | |
| 151 | E | A | -3.6894 | |
| 152 | R | A | -3.0282 | |
| 153 | I | A | -1.6201 | |
| 154 | A | A | -2.1405 | |
| 155 | H | A | -2.8995 | |
| 156 | Q | A | -3.1928 | |
| 157 | R | A | -2.8714 | |
| 158 | M | A | -1.2355 | |
| 159 | G | A | -2.0364 | |
| 160 | D | A | -2.6635 |