| Chain sequence(s) |
A: KHSISDYTEAEFLEFVKKIARAEGATECDDNKLVREFERLTEHPDGSDLIYYPRDDREDSPEEGIVKKEIKEWRAANGKSGFKQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:02)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:02)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:02)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:02)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:02)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:34)
[INFO] Main: Simulation completed successfully. (00:03:35)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 4 | K | A | -2.4233 | |
| 5 | H | A | -2.2140 | |
| 6 | S | A | -1.7123 | |
| 7 | I | A | 0.0000 | |
| 8 | S | A | -1.6699 | |
| 9 | D | A | -2.1788 | |
| 10 | Y | A | -1.6925 | |
| 11 | T | A | -1.7374 | |
| 12 | E | A | -2.0859 | |
| 13 | A | A | -1.2122 | |
| 14 | E | A | -1.7932 | |
| 15 | F | A | 0.0000 | |
| 16 | L | A | -1.8414 | |
| 17 | E | A | -2.5940 | |
| 18 | F | A | -1.6493 | |
| 19 | V | A | 0.0000 | |
| 20 | K | A | -2.6041 | |
| 21 | K | A | -2.4416 | |
| 22 | I | A | 0.0000 | |
| 23 | A | A | -1.6176 | |
| 24 | R | A | -2.6869 | |
| 25 | A | A | -2.3337 | |
| 26 | E | A | -2.6193 | |
| 27 | G | A | -1.9699 | |
| 28 | A | A | -0.7289 | |
| 29 | T | A | -1.4266 | |
| 30 | E | A | -2.3698 | |
| 31 | C | A | -1.2463 | |
| 32 | D | A | -1.9823 | |
| 33 | D | A | -2.7327 | |
| 34 | N | A | -2.9128 | |
| 35 | K | A | -3.2309 | |
| 36 | L | A | -2.3622 | |
| 37 | V | A | -2.1151 | |
| 38 | R | A | -3.3313 | |
| 39 | E | A | -2.7347 | |
| 40 | F | A | 0.0000 | |
| 41 | E | A | -2.7791 | |
| 42 | R | A | -2.5809 | |
| 43 | L | A | 0.0000 | |
| 44 | T | A | 0.0000 | |
| 45 | E | A | -2.7654 | |
| 46 | H | A | 0.0000 | |
| 47 | P | A | -1.7911 | |
| 48 | D | A | -2.4418 | |
| 49 | G | A | -2.0999 | |
| 50 | S | A | -1.0499 | |
| 51 | D | A | -1.1771 | |
| 52 | L | A | 0.0000 | |
| 53 | I | A | 0.0000 | |
| 54 | Y | A | 0.6354 | |
| 55 | Y | A | 0.1369 | |
| 56 | P | A | -2.1116 | |
| 57 | R | A | -3.6334 | |
| 58 | D | A | -4.1137 | |
| 59 | D | A | -3.9165 | |
| 60 | R | A | -3.7692 | |
| 61 | E | A | -4.3036 | |
| 62 | D | A | -3.5655 | |
| 63 | S | A | -2.2558 | |
| 64 | P | A | -2.4538 | |
| 65 | E | A | -3.1290 | |
| 66 | G | A | 0.0000 | |
| 67 | I | A | 0.0000 | |
| 68 | V | A | 0.0000 | |
| 69 | K | A | -3.1025 | |
| 70 | E | A | -2.4354 | |
| 71 | I | A | 0.0000 | |
| 72 | K | A | -2.8134 | |
| 73 | E | A | -2.9460 | |
| 74 | W | A | -1.9141 | |
| 75 | R | A | 0.0000 | |
| 76 | A | A | -1.6266 | |
| 77 | A | A | -1.2430 | |
| 78 | N | A | -1.5397 | |
| 79 | G | A | -1.4099 | |
| 80 | K | A | -2.2329 | |
| 81 | S | A | -1.3625 | |
| 82 | G | A | -1.7329 | |
| 83 | F | A | -1.5502 | |
| 84 | K | A | -2.1827 | |
| 85 | Q | A | -1.9633 |