| Chain sequence(s) |
A: PALCSCPHCAAAPTSGCCGPGCTNMS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:04)
[INFO] Main: Simulation completed successfully. (00:00:04)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | P | A | 0.4632 | |
| 2 | A | A | 0.6888 | |
| 3 | L | A | 1.6471 | |
| 4 | C | A | 1.5219 | |
| 5 | S | A | 0.4803 | |
| 6 | C | A | 0.2476 | |
| 7 | P | A | -0.4643 | |
| 8 | H | A | -0.7890 | |
| 9 | C | A | 0.0711 | |
| 10 | A | A | -0.0812 | |
| 11 | A | A | -0.1533 | |
| 12 | A | A | -0.1778 | |
| 13 | P | A | -0.2488 | |
| 14 | T | A | -0.2777 | |
| 15 | S | A | -0.2629 | |
| 16 | G | A | -0.1654 | |
| 17 | C | A | 0.5964 | |
| 18 | C | A | 0.8931 | |
| 19 | G | A | 0.0499 | |
| 20 | P | A | -0.2063 | |
| 21 | G | A | -0.2617 | |
| 22 | C | A | 0.5552 | |
| 23 | T | A | -0.1949 | |
| 24 | N | A | -0.4264 | |
| 25 | M | A | 0.4316 | |
| 26 | S | A | -0.0329 |