| Chain sequence(s) |
A: MSHHHHHHSGNVATIAASFKAMVEFFKQLDDALAGSPKADDPIYAKMIEQAAKIRANFKELEAYWTAKKDGKWGNTKKDKTEEEAAEDVRYFTRHKLPRFFYNMYRDAYEAGDKPLAEFAYHLYEPLHWTTDWPPYTIVRNKDGKDTFYISDWDKRWIKTAFVEMSEIMNLSPAEAESMESTFVEGFSNLGQFLVPNS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:07)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:07)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:07)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:07)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:07)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:08:00)
[INFO] Main: Simulation completed successfully. (00:08:01)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.5628 | |
| 2 | S | A | -0.6049 | |
| 3 | H | A | -1.7288 | |
| 4 | H | A | -2.3113 | |
| 5 | H | A | -2.6834 | |
| 6 | H | A | -2.7598 | |
| 7 | H | A | -2.7196 | |
| 8 | H | A | -2.4715 | |
| 9 | S | A | -2.1367 | |
| 10 | G | A | -1.9674 | |
| 11 | N | A | -2.0412 | |
| 12 | V | A | -1.3700 | |
| 13 | A | A | -1.1103 | |
| 14 | T | A | -0.6412 | |
| 15 | I | A | -0.2707 | |
| 16 | A | A | -0.4204 | |
| 17 | A | A | -0.2191 | |
| 18 | S | A | -0.3516 | |
| 19 | F | A | -0.6902 | |
| 20 | K | A | -1.3120 | |
| 21 | A | A | -0.5269 | |
| 22 | M | A | -0.2669 | |
| 23 | V | A | 0.0000 | |
| 24 | E | A | -1.8180 | |
| 25 | F | A | -0.1142 | |
| 26 | F | A | -0.7967 | |
| 27 | K | A | -2.0204 | |
| 28 | Q | A | -1.9940 | |
| 29 | L | A | -0.8795 | |
| 30 | D | A | -1.9685 | |
| 31 | D | A | -2.3497 | |
| 32 | A | A | -1.2599 | |
| 33 | L | A | -1.0872 | |
| 34 | A | A | -1.2945 | |
| 35 | G | A | -1.3934 | |
| 36 | S | A | -1.4851 | |
| 37 | P | A | -1.5525 | |
| 38 | K | A | -2.3894 | |
| 39 | A | A | -1.7786 | |
| 40 | D | A | -2.6341 | |
| 41 | D | A | -1.8101 | |
| 42 | P | A | -0.6086 | |
| 43 | I | A | 0.6306 | |
| 44 | Y | A | -0.6772 | |
| 45 | A | A | -1.4030 | |
| 46 | K | A | -1.8821 | |
| 47 | M | A | -0.9036 | |
| 48 | I | A | -1.3937 | |
| 49 | E | A | -2.8244 | |
| 50 | Q | A | -2.5990 | |
| 51 | A | A | 0.0000 | |
| 52 | A | A | -2.0666 | |
| 53 | K | A | -2.5902 | |
| 54 | I | A | -1.3806 | |
| 55 | R | A | -1.9343 | |
| 56 | A | A | -1.9720 | |
| 57 | N | A | -2.1774 | |
| 58 | F | A | -1.5041 | |
| 59 | K | A | -2.2379 | |
| 60 | E | A | -1.9792 | |
| 61 | L | A | -0.5174 | |
| 62 | E | A | -0.8967 | |
| 63 | A | A | -0.6977 | |
| 64 | Y | A | 0.2663 | |
| 65 | W | A | -0.1559 | |
| 66 | T | A | -1.0383 | |
| 67 | A | A | -1.2612 | |
| 68 | K | A | -1.8422 | |
| 69 | K | A | -2.7002 | |
| 70 | D | A | -2.6193 | |
| 71 | G | A | -2.4518 | |
| 72 | K | A | -2.5260 | |
| 73 | W | A | -1.1769 | |
| 74 | G | A | -1.5927 | |
| 75 | N | A | -2.3376 | |
| 76 | T | A | -2.2431 | |
| 77 | K | A | -3.7034 | |
| 78 | K | A | -4.0376 | |
| 79 | D | A | -4.2766 | |
| 80 | K | A | -4.1381 | |
| 81 | T | A | -3.5625 | |
| 82 | E | A | -3.5395 | |
| 83 | E | A | -3.4470 | |
| 84 | E | A | -4.0073 | |
| 85 | A | A | -2.7751 | |
| 86 | A | A | -2.1399 | |
| 87 | E | A | -2.8901 | |
| 88 | D | A | -2.2400 | |
| 89 | V | A | -0.9162 | |
| 90 | R | A | -0.8510 | |
| 91 | Y | A | 0.0044 | |
| 92 | F | A | -0.2926 | |
| 93 | T | A | 0.0000 | |
| 94 | R | A | -1.1946 | |
| 95 | H | A | -1.4394 | |
| 96 | K | A | -1.5142 | |
| 97 | L | A | -0.4492 | |
| 98 | P | A | 0.0000 | |
| 99 | R | A | -1.6248 | |
| 100 | F | A | 0.5543 | |
| 101 | F | A | 0.0000 | |
| 102 | Y | A | -0.6977 | |
| 103 | N | A | -0.9416 | |
| 104 | M | A | -0.6946 | |
| 105 | Y | A | -1.2273 | |
| 106 | R | A | -2.2107 | |
| 107 | D | A | -2.7529 | |
| 108 | A | A | 0.0000 | |
| 109 | Y | A | -1.4733 | |
| 110 | E | A | -2.5386 | |
| 111 | A | A | -1.6613 | |
| 112 | G | A | -1.6998 | |
| 113 | D | A | -2.2506 | |
| 114 | K | A | -2.4056 | |
| 115 | P | A | -1.6049 | |
| 116 | L | A | -0.9509 | |
| 117 | A | A | 0.0000 | |
| 118 | E | A | -1.6396 | |
| 119 | F | A | 0.0000 | |
| 120 | A | A | 0.0000 | |
| 121 | Y | A | -0.1540 | |
| 122 | H | A | -0.8223 | |
| 123 | L | A | 0.0000 | |
| 124 | Y | A | 0.0000 | |
| 125 | E | A | -0.2287 | |
| 126 | P | A | 0.0000 | |
| 127 | L | A | 0.0000 | |
| 128 | H | A | -0.8318 | |
| 129 | W | A | 0.0662 | |
| 130 | T | A | 0.0000 | |
| 131 | T | A | 0.0000 | |
| 132 | D | A | -1.0230 | |
| 133 | W | A | 0.4023 | |
| 134 | P | A | 0.4346 | |
| 135 | P | A | 0.4834 | |
| 136 | Y | A | 1.5616 | |
| 137 | T | A | 0.0000 | |
| 138 | I | A | 0.4464 | |
| 139 | V | A | -0.0954 | |
| 140 | R | A | -2.7443 | |
| 141 | N | A | -2.8316 | |
| 142 | K | A | -3.3453 | |
| 143 | D | A | -3.4261 | |
| 144 | G | A | -2.8241 | |
| 145 | K | A | -2.7806 | |
| 146 | D | A | 0.0000 | |
| 147 | T | A | -0.5525 | |
| 148 | F | A | 0.0000 | |
| 149 | Y | A | 0.4603 | |
| 150 | I | A | 0.0000 | |
| 151 | S | A | 0.0000 | |
| 152 | D | A | -2.2234 | |
| 153 | W | A | -1.2051 | |
| 154 | D | A | 0.0000 | |
| 155 | K | A | -2.8883 | |
| 156 | R | A | -3.1571 | |
| 157 | W | A | -1.5468 | |
| 158 | I | A | 0.0000 | |
| 159 | K | A | -2.5363 | |
| 160 | T | A | -1.2088 | |
| 161 | A | A | 0.0000 | |
| 162 | F | A | 0.0000 | |
| 163 | V | A | 0.3906 | |
| 164 | E | A | -0.6753 | |
| 165 | M | A | -0.2538 | |
| 166 | S | A | -0.8400 | |
| 167 | E | A | -1.5717 | |
| 168 | I | A | -0.2577 | |
| 169 | M | A | -0.2131 | |
| 170 | N | A | -1.5384 | |
| 171 | L | A | -0.9589 | |
| 172 | S | A | -1.0737 | |
| 173 | P | A | -1.1684 | |
| 174 | A | A | -1.3465 | |
| 175 | E | A | -2.0654 | |
| 176 | A | A | 0.0000 | |
| 177 | E | A | -2.3778 | |
| 178 | S | A | -1.4615 | |
| 179 | M | A | -0.9372 | |
| 180 | E | A | -1.5982 | |
| 181 | S | A | -1.5040 | |
| 182 | T | A | -0.9085 | |
| 183 | F | A | -0.7059 | |
| 184 | V | A | -1.2033 | |
| 185 | E | A | -2.0896 | |
| 186 | G | A | -1.3480 | |
| 187 | F | A | 0.0000 | |
| 188 | S | A | -1.0093 | |
| 189 | N | A | -1.5527 | |
| 190 | L | A | -0.4586 | |
| 191 | G | A | 0.0000 | |
| 192 | Q | A | -0.4471 | |
| 193 | F | A | -0.1785 | |
| 194 | L | A | 0.0000 | |
| 195 | V | A | 0.0000 | |
| 196 | P | A | -0.9138 | |
| 197 | N | A | -1.8956 | |
| 198 | S | A | -1.2860 |