| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFKDIVKNGKVVVPKVSGYQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGSVGHPLFNKLGDTENPTEPLHCTADDRVSFSFDPKQTQLFIVGCEPPTGEHWDIAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYVRCGPDGHPLPAAPPPSPLYTPPPATSPYAIPPPTDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLCTPENNVYDPSCFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:02)
[INFO] Main: Simulation completed successfully. (00:00:08)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9457 | |
| 2 | L | A | 1.9679 | |
| 3 | P | A | 0.6466 | |
| 4 | P | A | 0.3704 | |
| 5 | T | A | 0.1195 | |
| 6 | T | A | 0.1314 | |
| 7 | P | A | 0.1737 | |
| 8 | V | A | 1.2142 | |
| 9 | A | A | 0.0286 | |
| 10 | K | A | -1.1374 | |
| 11 | V | A | -0.3722 | |
| 12 | Q | A | -1.5069 | |
| 13 | S | A | -1.6058 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.4722 | |
| 16 | E | A | -2.4634 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4503 | |
| 20 | P | A | 0.0998 | |
| 21 | T | A | 0.1153 | |
| 22 | S | A | -0.1696 | |
| 23 | L | A | 0.0000 | |
| 24 | F | A | -0.1020 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.1454 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.7087 | |
| 31 | R | A | -2.5908 | |
| 32 | L | A | -0.7316 | |
| 33 | L | A | 1.1891 | |
| 34 | T | A | 1.3537 | |
| 35 | V | A | 1.7848 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.2343 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.6153 | |
| 40 | K | A | -1.6271 | |
| 41 | D | A | -0.9124 | |
| 42 | I | A | 0.8341 | |
| 43 | V | A | 1.0206 | |
| 44 | K | A | -1.1843 | |
| 45 | N | A | -1.9261 | |
| 46 | G | A | -1.2262 | |
| 47 | K | A | -0.9445 | |
| 48 | V | A | 1.5116 | |
| 49 | V | A | 2.0643 | |
| 50 | V | A | 1.2711 | |
| 51 | P | A | 0.4637 | |
| 52 | K | A | -0.6371 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1254 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.4946 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2708 | |
| 70 | K | A | -1.8116 | |
| 71 | F | A | -0.6654 | |
| 72 | A | A | -0.5710 | |
| 73 | L | A | -0.8632 | |
| 74 | P | A | -1.2628 | |
| 75 | Q | A | -2.4792 | |
| 76 | K | A | -3.1007 | |
| 77 | D | A | -2.9965 | |
| 78 | F | A | -1.6510 | |
| 79 | Y | A | -1.9287 | |
| 80 | D | A | -2.7745 | |
| 81 | P | A | -2.3556 | |
| 82 | E | A | -3.0744 | |
| 83 | K | A | -3.4488 | |
| 84 | E | A | -2.5163 | |
| 85 | R | A | -1.3265 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6533 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9656 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3208 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.6751 | |
| 99 | G | A | -0.5336 | |
| 100 | P | A | -0.4251 | |
| 101 | L | A | -0.0015 | |
| 102 | G | A | -0.3550 | |
| 103 | K | A | -0.9658 | |
| 104 | G | A | -0.6666 | |
| 105 | S | A | -0.6594 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | 0.0699 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | 0.3145 | |
| 110 | L | A | 0.2249 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.1044 | |
| 113 | K | A | -0.4211 | |
| 114 | L | A | -0.7003 | |
| 115 | G | A | -1.0839 | |
| 116 | D | A | -1.5816 | |
| 117 | T | A | -1.4330 | |
| 118 | E | A | -2.5264 | |
| 119 | N | A | -2.6321 | |
| 120 | P | A | -2.1271 | |
| 121 | T | A | -1.7065 | |
| 122 | E | A | -2.3139 | |
| 123 | P | A | -1.1022 | |
| 124 | L | A | -0.5143 | |
| 125 | H | A | -0.6461 | |
| 126 | C | A | -0.5338 | |
| 127 | T | A | -0.8347 | |
| 128 | A | A | -0.9493 | |
| 129 | D | A | -1.9998 | |
| 130 | D | A | -1.5081 | |
| 131 | R | A | -1.1149 | |
| 132 | V | A | 0.0938 | |
| 133 | S | A | 0.1757 | |
| 134 | F | A | 0.1497 | |
| 135 | S | A | -0.1684 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.8547 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | -0.2662 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5555 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2428 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.0621 | |
| 157 | D | A | 0.2898 | |
| 158 | I | A | 0.7987 | |
| 159 | A | A | 0.0889 | |
| 160 | E | A | -1.4876 | |
| 161 | P | A | -0.2555 | |
| 162 | C | A | 0.1696 | |
| 163 | P | A | -0.1794 | |
| 164 | G | A | -0.0845 | |
| 165 | L | A | 0.5750 | |
| 166 | P | A | -0.1201 | |
| 167 | P | A | -0.3432 | |
| 168 | G | A | -0.4156 | |
| 169 | A | A | -0.0126 | |
| 170 | C | A | 0.7562 | |
| 171 | P | A | 0.5377 | |
| 172 | P | A | 0.6834 | |
| 173 | I | A | 2.0223 | |
| 174 | Q | A | 0.8229 | |
| 175 | L | A | 1.4115 | |
| 176 | V | A | 0.8052 | |
| 177 | N | A | -0.2953 | |
| 178 | S | A | 0.0322 | |
| 179 | V | A | 0.4416 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3788 | |
| 182 | D | A | 0.0866 | |
| 183 | G | A | -0.1597 | |
| 184 | D | A | -0.5877 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1170 | |
| 190 | F | A | 0.0525 | |
| 191 | G | A | -0.1065 | |
| 192 | N | A | -0.3057 | |
| 193 | M | A | -0.1936 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.4455 | |
| 197 | E | A | -2.6607 | |
| 198 | L | A | -1.2437 | |
| 199 | Q | A | -2.5454 | |
| 200 | Q | A | -3.3519 | |
| 201 | D | A | -3.6070 | |
| 202 | R | A | -3.3440 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.2030 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3925 | |
| 211 | S | A | -1.9193 | |
| 212 | T | A | -1.5144 | |
| 213 | R | A | -2.2613 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1834 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.3264 | |
| 220 | L | A | 0.5466 | |
| 221 | K | A | -1.2172 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.9381 | |
| 224 | N | A | -1.5509 | |
| 225 | E | A | -1.3131 | |
| 226 | A | A | -0.6665 | |
| 227 | Y | A | -0.4472 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.6936 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | -0.1379 | |
| 234 | F | A | 0.0319 | |
| 235 | G | A | -0.9474 | |
| 236 | R | A | -2.7314 | |
| 237 | R | A | -3.0695 | |
| 238 | E | A | -2.2066 | |
| 239 | Q | A | -0.2239 | |
| 240 | V | A | 1.4892 | |
| 241 | Y | A | 1.2117 | |
| 242 | A | A | 0.1304 | |
| 243 | R | A | -1.2405 | |
| 244 | H | A | -1.2152 | |
| 245 | F | A | -0.2109 | |
| 246 | Y | A | 0.0000 | |
| 247 | V | A | 0.0000 | |
| 248 | R | A | -0.5845 | |
| 249 | C | A | -0.8321 | |
| 250 | G | A | -0.8855 | |
| 251 | P | A | -0.9441 | |
| 252 | D | A | -1.4134 | |
| 253 | G | A | -1.3228 | |
| 254 | H | A | -1.4748 | |
| 255 | P | A | -0.9659 | |
| 256 | L | A | 0.3021 | |
| 257 | P | A | 0.1161 | |
| 258 | A | A | 0.0196 | |
| 259 | A | A | 0.0279 | |
| 260 | P | A | -0.4816 | |
| 261 | P | A | -0.3999 | |
| 262 | P | A | -0.3089 | |
| 263 | S | A | 0.1298 | |
| 264 | P | A | 0.4235 | |
| 265 | L | A | 1.5635 | |
| 266 | Y | A | 0.9130 | |
| 267 | T | A | 0.1035 | |
| 268 | P | A | 0.2360 | |
| 269 | P | A | 0.2143 | |
| 270 | P | A | -0.2164 | |
| 271 | A | A | 0.2502 | |
| 272 | T | A | -0.0607 | |
| 273 | S | A | 0.3465 | |
| 274 | P | A | 0.2020 | |
| 275 | Y | A | 1.3199 | |
| 276 | A | A | 1.2629 | |
| 277 | I | A | 2.1165 | |
| 278 | P | A | 1.0673 | |
| 279 | P | A | 0.1944 | |
| 280 | P | A | -0.3851 | |
| 281 | T | A | -0.5888 | |
| 282 | D | A | -1.1134 | |
| 283 | Y | A | 0.7691 | |
| 284 | F | A | 0.6746 | |
| 285 | G | A | 0.1307 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.8678 | |
| 291 | L | A | 1.5720 | |
| 292 | V | A | 0.5671 | |
| 293 | S | A | -0.1689 | |
| 294 | S | A | -0.9715 | |
| 295 | D | A | -1.8466 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.1703 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6529 | |
| 301 | R | A | -1.8941 | |
| 302 | P | A | -0.9833 | |
| 303 | F | A | -0.1903 | |
| 304 | W | A | -0.5230 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0851 | |
| 307 | R | A | -2.9325 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.6555 | |
| 310 | G | A | -1.4222 | |
| 311 | N | A | -1.3952 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.9824 | |
| 319 | N | A | -0.9025 | |
| 320 | E | A | -1.0621 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.4055 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.2005 | |
| 333 | N | A | 0.4809 | |
| 334 | F | A | 1.7546 | |
| 335 | T | A | 0.8792 | |
| 336 | I | A | 0.4466 | |
| 337 | S | A | -0.9664 | |
| 338 | Q | A | -1.7482 | |
| 339 | Q | A | -1.3024 | |
| 340 | L | A | 0.6603 | |
| 341 | C | A | 0.2791 | |
| 342 | T | A | -0.3123 | |
| 343 | P | A | -0.8950 | |
| 344 | E | A | -2.2644 | |
| 345 | N | A | -2.0534 | |
| 346 | N | A | -1.4087 | |
| 347 | V | A | 0.6304 | |
| 348 | Y | A | 0.9842 | |
| 349 | D | A | -0.1869 | |
| 350 | P | A | -0.4052 | |
| 351 | S | A | -0.3201 | |
| 352 | C | A | 0.0000 | |
| 353 | F | A | -0.7822 | |
| 354 | K | A | -1.7860 | |
| 355 | N | A | -1.7760 | |
| 356 | Y | A | -0.0770 | |
| 357 | L | A | 0.6508 | |
| 358 | R | A | 0.9539 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.3601 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0187 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -1.9094 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6667 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.2876 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3296 | |
| 376 | L | A | -1.7553 | |
| 377 | D | A | -2.0390 | |
| 378 | P | A | -1.0648 | |
| 379 | G | A | -1.0292 | |
| 380 | V | A | -0.9395 | |
| 381 | L | A | -0.5485 | |
| 382 | A | A | -0.6697 | |
| 383 | H | A | -0.8575 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.4362 | |
| 386 | T | A | -0.5797 | |
| 387 | M | A | -0.3362 | |
| 388 | N | A | -0.8819 | |
| 389 | P | A | -1.3110 | |
| 390 | T | A | -1.6711 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.6446 | |
| 393 | E | A | -3.1038 | |
| 394 | N | A | -2.9508 | |
| 395 | W | A | -1.6938 | |
| 396 | N | A | -1.4121 | |
| 397 | L | A | -0.3108 | |
| 398 | G | A | 0.4689 | |
| 399 | F | A | 2.3948 | |
| 400 | V | A | 1.8155 | |
| 401 | P | A | 0.0290 | |
| 402 | P | A | -2.0490 | |
| 403 | K | A | -3.5832 | |
| 404 | E | A | -4.1400 | |
| 405 | R | A | -4.7363 | |
| 406 | E | A | -4.1462 | |
| 407 | D | A | -3.0147 | |
| 408 | P | A | -1.8446 | |
| 409 | Y | A | -0.9705 | |
| 410 | K | A | -2.0919 | |
| 411 | G | A | -0.6319 | |
| 412 | L | A | 0.6698 | |
| 413 | I | A | 1.5893 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.3678 | |
| 416 | E | A | -1.6208 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.8356 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -1.8901 | |
| 421 | E | A | -2.5009 | |
| 422 | R | A | -2.0662 | |
| 423 | F | A | -1.0219 | |
| 424 | S | A | -1.3176 | |
| 425 | Q | A | -1.8380 | |
| 426 | D | A | -2.9630 | |
| 427 | L | A | -2.1778 | |
| 428 | D | A | -3.0556 | |
| 429 | Q | A | -2.7591 | |
| 430 | F | A | -1.6449 | |
| 431 | A | A | -1.1578 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -2.3102 | |
| 435 | K | A | -1.1321 | |
| 436 | F | A | -0.1193 | |
| 437 | L | A | 0.7737 | |
| 438 | Y | A | 0.6151 | |
| 439 | Q | A | -0.3847 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine