Project name: 1DEE

Status: done

Started: 2026-03-30 04:26:34
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Chain sequence(s) H: QVQLVESGGGVVQPGKSLRLSCAASGFTFSGYGMHWVRQAPGKGLEWVALISYDESNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKVKFYDPTAPNDYWGQGTLVTVSS
L: DIQMTQSPSSLSASVGDRVTITCRTSQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSAPRTFGQGTKVEIK
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:12)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:14)
Show buried residues

Minimal score value
-2.707
Maximal score value
1.7431
Average score
-0.4968
Total score value
-113.2797

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Q H -1.4603
2 V H -0.8146
3 Q H -1.0910
4 L H 0.0000
5 V H 0.4608
6 E H 0.0000
7 S H -0.2513
8 G H -0.5254
9 G H 0.2451
11 G H 0.9082
12 V H 1.7431
13 V H 0.0490
14 Q H -1.1773
15 P H -1.7490
16 G H -1.9022
17 K H -2.2168
18 S H -1.4348
19 L H -0.7659
20 R H -1.2156
21 L H 0.0000
22 S H -0.2244
23 C H 0.0000
24 A H -0.3287
25 A H 0.0000
26 S H -0.9973
27 G H -1.0793
28 F H -0.4062
29 T H -0.2106
30 F H 0.0000
35 S H -0.5696
36 G H 0.4214
37 Y H 0.6860
38 G H 0.1978
39 M H 0.0000
40 H H 0.0000
41 W H 0.0000
42 V H 0.0000
43 R H 0.0000
44 Q H -0.7066
45 A H -1.0823
46 P H -0.8658
47 G H -1.4786
48 K H -2.3603
49 G H -1.5851
50 L H 0.0000
51 E H -1.0159
52 W H 0.0000
53 V H 0.0000
54 A H 0.0000
55 L H 0.3062
56 I H 0.0000
57 S H -0.2193
58 Y H 0.3671
59 D H -1.1611
62 E H -1.4264
63 S H -1.2153
64 N H -1.1470
65 K H -0.5772
66 Y H 0.2234
67 Y H -0.4771
68 A H 0.0000
69 D H -2.5409
70 S H -1.7169
71 V H 0.0000
72 K H -2.2896
74 G H -1.6286
75 R H -1.3538
76 F H 0.0000
77 T H -0.6102
78 I H 0.0000
79 S H -0.4024
80 R H 0.0000
81 D H -1.5602
82 N H -1.6666
83 S H -1.5693
84 K H -2.3904
85 N H -1.8454
86 T H -1.0130
87 L H 0.0000
88 Y H -0.2449
89 L H 0.0000
90 Q H -0.7909
91 M H 0.0000
92 N H -1.5240
93 S H -1.5781
94 L H 0.0000
95 R H -2.4051
96 A H -1.6428
97 E H -2.2417
98 D H 0.0000
99 T H -0.3913
100 A H 0.0000
101 V H 0.5449
102 Y H 0.0000
103 Y H 0.0000
104 C H 0.0000
105 A H 0.0000
106 K H 0.0000
107 V H 0.0000
108 K H 0.1318
109 F H 0.7585
110 Y H 1.2195
111 D H -0.2210
112A P H -0.1216
112 T H 0.2330
113 A H 0.0000
114 P H 0.0000
115 N H 0.0000
116 D H -0.0788
117 Y H 0.1334
118 W H -0.2485
119 G H 0.0000
120 Q H -1.4346
121 G H -0.4176
122 T H 0.3789
123 L H 1.4751
124 V H 0.0000
125 T H 0.4623
126 V H 0.0000
127 S H -0.5341
128 S H -0.5008
1 D L -2.4264
2 I L 0.0000
3 Q L -2.2377
4 M L 0.0000
5 T L -1.4325
6 Q L 0.0000
7 S L -0.7356
8 P L -0.5268
9 S L -0.8779
10 S L -1.0631
11 L L -0.6579
12 S L -0.8158
13 A L 0.0000
14 S L -0.0488
15 V L 0.8640
16 G L -0.3601
17 D L -1.1955
18 R L -2.0579
19 V L 0.0000
20 T L -0.6035
21 I L 0.0000
22 T L -0.8178
23 C L 0.0000
24 R L -2.7070
25 T L 0.0000
26 S L -1.7970
27 Q L -1.6751
28 S L -0.8885
29 I L 0.0000
36 S L -0.1650
37 S L -0.0222
38 Y L 0.6537
39 L L 0.0000
40 N L 0.0000
41 W L 0.0000
42 Y L 0.0000
43 Q L -0.8893
44 Q L 0.0000
45 K L -1.6487
46 P L -1.2449
47 G L -1.6630
48 K L -2.5548
49 A L -1.5642
50 P L 0.0000
51 K L -1.3102
52 L L 0.0000
53 L L 0.0000
54 I L 0.0000
55 Y L 0.2623
56 A L 0.1798
57 A L 0.0000
65 S L -0.1981
66 S L 0.0830
67 L L 0.2983
68 Q L -0.2620
69 S L -0.4033
70 G L -0.5594
71 V L 0.0000
72 P L -0.3872
74 S L -0.4215
75 R L -0.6981
76 F L 0.0000
77 S L -0.3329
78 G L -0.2661
79 S L -0.6545
80 G L -0.9683
83 S L -0.9194
84 G L -1.0023
85 T L -1.5892
86 D L -2.0615
87 F L 0.0000
88 T L -0.7389
89 L L 0.0000
90 T L -0.6116
91 I L 0.0000
92 S L -1.1877
93 S L -0.9362
94 L L 0.0000
95 Q L -0.7049
96 P L -0.5856
97 E L -1.8639
98 D L 0.0000
99 F L -0.5094
100 A L 0.0000
101 T L -1.0654
102 Y L 0.0000
103 Y L 0.0000
104 C L 0.0000
105 Q L 0.0000
106 Q L 0.0000
107 S L 0.0000
108 Y L 0.9782
109 S L 0.1378
114 A L 0.0786
115 P L -0.4768
116 R L 0.0000
117 T L -0.6675
118 F L -0.4462
119 G L 0.0000
120 Q L -1.7256
121 G L 0.0000
122 T L 0.0000
123 K L -1.6286
124 V L 0.0000
125 E L -1.0625
126 I L 0.6975
127 K L -0.8352
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Laboratory of Theory of Biopolymers 2018