| Chain sequence(s) |
A: FKFKGHFKF
C: FKFKGHFKF B: FKFKGHFKF E: FKFKGHFKF D: FKFKGHFKF G: FKFKGHFKF F: FKFKGHFKF I: FKFKGHFKF H: FKFKGHFKF K: FKFKGHFKF J: FKFKGHFKF M: FKFKGHFKF L: FKFKGHFKF O: FKFKGHFKF N: FKFKGHFKF Q: FKFKGHFKF P: FKFKGHFKF S: FKFKGHFKF R: FKFKGHFKF T: FKFKGHFKF input PDB |
| Selected Chain(s) | A,C,B,E,D,G,F,I,H,K,J,M,L,O,N,Q,P,S,R,T |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:07:29)
[INFO] Main: Simulation completed successfully. (00:07:32)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | F | A | 1.1748 | |
| 2 | K | A | -1.2022 | |
| 3 | F | A | -1.1919 | |
| 4 | K | A | -1.9891 | |
| 5 | G | A | -2.0708 | |
| 6 | H | A | -1.6803 | |
| 7 | F | A | -0.4964 | |
| 8 | K | A | -1.0547 | |
| 9 | F | A | 0.6785 | |
| 1 | F | B | 1.2128 | |
| 2 | K | B | -0.2527 | |
| 3 | F | B | -0.2538 | |
| 4 | K | B | -1.3160 | |
| 5 | G | B | -1.6408 | |
| 6 | H | B | -1.5719 | |
| 7 | F | B | 0.1547 | |
| 8 | K | B | -1.0988 | |
| 9 | F | B | 1.2889 | |
| 1 | F | C | 0.9526 | |
| 2 | K | C | -1.2212 | |
| 3 | F | C | -0.8143 | |
| 4 | K | C | -1.8817 | |
| 5 | G | C | -0.7536 | |
| 6 | H | C | -0.6205 | |
| 7 | F | C | 0.6730 | |
| 8 | K | C | -0.8966 | |
| 9 | F | C | 1.0598 | |
| 1 | F | D | 0.0000 | |
| 2 | K | D | -0.9651 | |
| 3 | F | D | 0.7870 | |
| 4 | K | D | -0.9108 | |
| 5 | G | D | -0.0995 | |
| 6 | H | D | -0.7060 | |
| 7 | F | D | 0.9552 | |
| 8 | K | D | 0.2006 | |
| 9 | F | D | 1.6920 | |
| 1 | F | E | 0.7408 | |
| 2 | K | E | -0.6026 | |
| 3 | F | E | 0.5170 | |
| 4 | K | E | -1.2299 | |
| 5 | G | E | -0.9787 | |
| 6 | H | E | -0.6454 | |
| 7 | F | E | 0.8489 | |
| 8 | K | E | -0.1486 | |
| 9 | F | E | 1.9363 | |
| 1 | F | F | 1.4681 | |
| 2 | K | F | -0.3581 | |
| 3 | F | F | 0.5984 | |
| 4 | K | F | -1.2481 | |
| 5 | G | F | -1.0713 | |
| 6 | H | F | -0.7125 | |
| 7 | F | F | 0.8490 | |
| 8 | K | F | -0.1467 | |
| 9 | F | F | 2.0014 | |
| 1 | F | G | 2.0672 | |
| 2 | K | G | 0.6335 | |
| 3 | F | G | 1.9836 | |
| 4 | K | G | 0.0000 | |
| 5 | G | G | 0.6105 | |
| 6 | H | G | 0.3975 | |
| 7 | F | G | 1.1783 | |
| 8 | K | G | 1.1294 | |
| 9 | F | G | 1.0672 | |
| 1 | F | H | 1.6758 | |
| 2 | K | H | -0.1786 | |
| 3 | F | H | 1.2165 | |
| 4 | K | H | -0.8681 | |
| 5 | G | H | -0.9017 | |
| 6 | H | H | -1.2486 | |
| 7 | F | H | -0.4368 | |
| 8 | K | H | -1.0557 | |
| 9 | F | H | 1.1809 | |
| 1 | F | I | 1.4326 | |
| 2 | K | I | -0.2565 | |
| 3 | F | I | -0.5416 | |
| 4 | K | I | -2.2399 | |
| 5 | G | I | 0.0000 | |
| 6 | H | I | -2.2122 | |
| 7 | F | I | -0.8967 | |
| 8 | K | I | -1.5864 | |
| 9 | F | I | -0.5629 | |
| 1 | F | J | 0.6601 | |
| 2 | K | J | -1.1377 | |
| 3 | F | J | -0.9106 | |
| 4 | K | J | -1.7435 | |
| 5 | G | J | -1.1742 | |
| 6 | H | J | -1.6369 | |
| 7 | F | J | -0.2591 | |
| 8 | K | J | -2.2993 | |
| 9 | F | J | 0.0000 | |
| 1 | F | K | 1.2590 | |
| 2 | K | K | 0.0300 | |
| 3 | F | K | 1.0988 | |
| 4 | K | K | -0.6888 | |
| 5 | G | K | -0.4297 | |
| 6 | H | K | -1.1506 | |
| 7 | F | K | -0.9051 | |
| 8 | K | K | -1.1502 | |
| 9 | F | K | 0.5525 | |
| 1 | F | L | 1.0979 | |
| 2 | K | L | 0.0655 | |
| 3 | F | L | 0.7178 | |
| 4 | K | L | -1.2357 | |
| 5 | G | L | -1.8549 | |
| 6 | H | L | -1.9882 | |
| 7 | F | L | -0.7427 | |
| 8 | K | L | -1.1476 | |
| 9 | F | L | 1.1333 | |
| 1 | F | M | 0.8532 | |
| 2 | K | M | -0.3285 | |
| 3 | F | M | 0.7733 | |
| 4 | K | M | -1.5518 | |
| 5 | G | M | 0.0000 | |
| 6 | H | M | -2.0857 | |
| 7 | F | M | 0.0000 | |
| 8 | K | M | -2.3821 | |
| 9 | F | M | -0.9884 | |
| 1 | F | N | 0.8161 | |
| 2 | K | N | -0.9772 | |
| 3 | F | N | -0.3080 | |
| 4 | K | N | -1.9150 | |
| 5 | G | N | -1.2720 | |
| 6 | H | N | -1.6679 | |
| 7 | F | N | -0.8750 | |
| 8 | K | N | -1.9407 | |
| 9 | F | N | -1.1972 | |
| 1 | F | O | 1.3900 | |
| 2 | K | O | -0.3939 | |
| 3 | F | O | 0.4236 | |
| 4 | K | O | -1.2194 | |
| 5 | G | O | -0.2047 | |
| 6 | H | O | -0.5964 | |
| 7 | F | O | 0.2825 | |
| 8 | K | O | -1.0081 | |
| 9 | F | O | 0.8888 | |
| 1 | F | P | -0.1476 | |
| 2 | K | P | -0.4881 | |
| 3 | F | P | 1.1406 | |
| 4 | K | P | 0.7626 | |
| 5 | G | P | 0.8965 | |
| 6 | H | P | 0.0000 | |
| 7 | F | P | 2.0851 | |
| 8 | K | P | 0.8153 | |
| 9 | F | P | 1.2447 | |
| 1 | F | Q | 0.8638 | |
| 2 | K | Q | -0.9018 | |
| 3 | F | Q | 0.1593 | |
| 4 | K | Q | -1.4351 | |
| 5 | G | Q | 0.0000 | |
| 6 | H | Q | -0.3299 | |
| 7 | F | Q | 0.5698 | |
| 8 | K | Q | -0.2818 | |
| 9 | F | Q | 1.2837 | |
| 1 | F | R | 1.4354 | |
| 2 | K | R | 0.0854 | |
| 3 | F | R | 1.3061 | |
| 4 | K | R | -0.5904 | |
| 5 | G | R | 0.0000 | |
| 6 | H | R | -0.5188 | |
| 7 | F | R | 0.4307 | |
| 8 | K | R | -0.2199 | |
| 9 | F | R | 0.9505 | |
| 1 | F | S | 1.3250 | |
| 2 | K | S | -0.5417 | |
| 3 | F | S | 0.3362 | |
| 4 | K | S | -1.4705 | |
| 5 | G | S | -1.3550 | |
| 6 | H | S | -1.1125 | |
| 7 | F | S | -0.0290 | |
| 8 | K | S | -0.6815 | |
| 9 | F | S | 0.6844 | |
| 1 | F | T | 1.0807 | |
| 2 | K | T | -0.3262 | |
| 3 | F | T | -0.1924 | |
| 4 | K | T | -1.1793 | |
| 5 | G | T | -0.5300 | |
| 6 | H | T | 0.5781 | |
| 7 | F | T | 1.4252 | |
| 8 | K | T | 0.1686 | |
| 9 | F | T | 2.0666 |