| Chain sequence(s) |
A: GPLPLDPAPALRSTTEFVEPTDLYYIAETDLIEEVGHPTRDIVVDGKVLVPRVSAWQWLVFKLKLPDPNTLPLPSPDFLDPSTEIRIWQLEAFEIHRYGPLGEGEYGHPHFNRLGNVDNPTEYQHETEDDTVDYSFRPKYLQAFLIGDEPPLGVYTAPAPPTPGLPPGAAPPLTTVTTYIEHGDMADIGFGAKDYAALDPRKDNVPDIILDTTTKRPDLAGMRADPTGRRLFTYDRYEKSYDKEKLVLSGPLLFPPPDSPPPSPLYTPPAPTSPYYVLPPYNYFSIPDRGEITEEDLLFNKPVLLTKTPGLNNGVLWGNQLYITVLDNSRAEIEKIKTQLSTPPINVYDPSNYVEGELYSRKYKLSLIVRLCRIPLTPETLALLARLDPSILVNAKLPFIPPVERPDPLAGKKFIELDLTDKLSSDLSKYPLGRWYLNR
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:09)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:09)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:09)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:09)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:09)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:10)
[INFO] Main: Simulation completed successfully. (00:00:15)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.1993 | |
| 2 | P | A | 0.4407 | |
| 3 | L | A | 1.2956 | |
| 4 | P | A | 0.5110 | |
| 5 | L | A | 0.8695 | |
| 6 | D | A | -1.0151 | |
| 7 | P | A | -0.7567 | |
| 8 | A | A | -0.5489 | |
| 9 | P | A | -1.0677 | |
| 10 | A | A | -0.4307 | |
| 11 | L | A | -0.4309 | |
| 12 | R | A | -1.4350 | |
| 13 | S | A | -1.0218 | |
| 14 | T | A | 0.0000 | |
| 15 | T | A | -1.5826 | |
| 16 | E | A | -2.2659 | |
| 17 | F | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | E | A | -1.8573 | |
| 20 | P | A | -1.3967 | |
| 21 | T | A | 0.0000 | |
| 22 | D | A | -1.6571 | |
| 23 | L | A | -0.5391 | |
| 24 | Y | A | -0.1888 | |
| 25 | Y | A | 0.0312 | |
| 26 | I | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | E | A | -0.7582 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -1.4667 | |
| 31 | L | A | -0.0125 | |
| 32 | I | A | -0.6808 | |
| 33 | E | A | -1.4835 | |
| 34 | E | A | -0.7280 | |
| 35 | V | A | 0.4612 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.9170 | |
| 38 | P | A | 0.0000 | |
| 39 | T | A | -1.4088 | |
| 40 | R | A | -2.1403 | |
| 41 | D | A | -0.8069 | |
| 42 | I | A | 1.2871 | |
| 43 | V | A | 2.2327 | |
| 44 | V | A | 1.4802 | |
| 45 | D | A | -1.0214 | |
| 46 | G | A | -0.5896 | |
| 47 | K | A | -0.2095 | |
| 48 | V | A | 2.0181 | |
| 49 | L | A | 2.5766 | |
| 50 | V | A | 1.5817 | |
| 51 | P | A | 0.1676 | |
| 52 | R | A | -0.9323 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | A | A | 0.0000 | |
| 56 | W | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | L | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | K | A | -1.6427 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.9761 | |
| 65 | L | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.0795 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -0.8496 | |
| 70 | T | A | -0.2941 | |
| 71 | L | A | 0.0386 | |
| 72 | P | A | 0.0083 | |
| 73 | L | A | 0.0837 | |
| 74 | P | A | -0.2251 | |
| 75 | S | A | -0.6603 | |
| 76 | P | A | -1.1848 | |
| 77 | D | A | -2.0124 | |
| 78 | F | A | -0.9673 | |
| 79 | L | A | 0.0000 | |
| 80 | D | A | -1.8803 | |
| 81 | P | A | -1.1255 | |
| 82 | S | A | -0.8805 | |
| 83 | T | A | -0.7571 | |
| 84 | E | A | -0.9735 | |
| 85 | I | A | 0.0000 | |
| 86 | R | A | 0.0000 | |
| 87 | I | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | Q | A | -0.4018 | |
| 90 | L | A | 0.0000 | |
| 91 | E | A | -0.3597 | |
| 92 | A | A | 0.0000 | |
| 93 | F | A | 0.0000 | |
| 94 | E | A | -0.8492 | |
| 95 | I | A | 0.0000 | |
| 96 | H | A | -0.6776 | |
| 97 | R | A | 0.0000 | |
| 98 | Y | A | -0.0011 | |
| 99 | G | A | -0.4864 | |
| 100 | P | A | -0.6756 | |
| 101 | L | A | -0.4744 | |
| 102 | G | A | 0.0000 | |
| 103 | E | A | -2.7398 | |
| 104 | G | A | 0.0000 | |
| 105 | E | A | -2.5332 | |
| 106 | Y | A | 0.0000 | |
| 107 | G | A | -1.2981 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | -1.5437 | |
| 110 | H | A | -2.0719 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | 0.0000 | |
| 113 | R | A | -1.0464 | |
| 114 | L | A | -0.7607 | |
| 115 | G | A | 0.0000 | |
| 116 | N | A | -1.3251 | |
| 117 | V | A | -1.0147 | |
| 118 | D | A | -2.5783 | |
| 119 | N | A | -2.5519 | |
| 120 | P | A | -1.8245 | |
| 121 | T | A | -1.5753 | |
| 122 | E | A | -2.1291 | |
| 123 | Y | A | -0.7396 | |
| 124 | Q | A | -1.5586 | |
| 125 | H | A | -1.9547 | |
| 126 | E | A | -2.5809 | |
| 127 | T | A | -2.4584 | |
| 128 | E | A | -3.0151 | |
| 129 | D | A | -3.0428 | |
| 130 | D | A | -1.9881 | |
| 131 | T | A | -1.4805 | |
| 132 | V | A | -1.0049 | |
| 133 | D | A | -1.9346 | |
| 134 | Y | A | -1.1259 | |
| 135 | S | A | -1.0411 | |
| 136 | F | A | 0.0000 | |
| 137 | R | A | -1.5518 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | -0.9484 | |
| 140 | Y | A | 0.0000 | |
| 141 | L | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | A | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | L | A | 0.0000 | |
| 146 | I | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | D | A | 0.0000 | |
| 149 | E | A | -0.4318 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | L | A | -0.1548 | |
| 153 | G | A | 0.0000 | |
| 154 | V | A | 0.0000 | |
| 155 | Y | A | -0.5775 | |
| 156 | T | A | 0.1699 | |
| 157 | A | A | 0.0000 | |
| 158 | P | A | 0.3579 | |
| 159 | A | A | 0.2570 | |
| 160 | P | A | -0.2738 | |
| 161 | P | A | -0.4335 | |
| 162 | T | A | -0.2839 | |
| 163 | P | A | -0.3591 | |
| 164 | G | A | -0.2287 | |
| 165 | L | A | 0.4251 | |
| 166 | P | A | -0.1264 | |
| 167 | P | A | -0.3922 | |
| 168 | G | A | -0.2202 | |
| 169 | A | A | 0.1288 | |
| 170 | A | A | 0.4615 | |
| 171 | P | A | 0.2649 | |
| 172 | P | A | 0.4746 | |
| 173 | L | A | 1.3890 | |
| 174 | T | A | 0.7179 | |
| 175 | T | A | 0.3864 | |
| 176 | V | A | 0.4435 | |
| 177 | T | A | -0.0008 | |
| 178 | T | A | 0.1898 | |
| 179 | Y | A | -0.1500 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | -1.0444 | |
| 182 | H | A | -0.9809 | |
| 183 | G | A | -0.6874 | |
| 184 | D | A | -0.8846 | |
| 185 | M | A | 0.0000 | |
| 186 | A | A | 0.0000 | |
| 187 | D | A | -0.9324 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | -0.6002 | |
| 190 | F | A | 0.0000 | |
| 191 | G | A | -0.7172 | |
| 192 | A | A | -1.0072 | |
| 193 | K | A | -0.8225 | |
| 194 | D | A | -0.7620 | |
| 195 | Y | A | 0.0000 | |
| 196 | A | A | -1.3116 | |
| 197 | A | A | -0.6993 | |
| 198 | L | A | -0.3570 | |
| 199 | D | A | 0.0000 | |
| 200 | P | A | -1.7248 | |
| 201 | R | A | -2.5741 | |
| 202 | K | A | -2.7731 | |
| 203 | D | A | 0.0000 | |
| 204 | N | A | -1.3676 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | D | A | -1.6037 | |
| 208 | I | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | L | A | -1.4596 | |
| 211 | D | A | -2.0085 | |
| 212 | T | A | -1.0837 | |
| 213 | T | A | -0.7078 | |
| 214 | T | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | R | A | -1.9184 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | -0.8176 | |
| 219 | L | A | -0.6879 | |
| 220 | A | A | -0.6503 | |
| 221 | G | A | -0.8047 | |
| 222 | M | A | 0.0000 | |
| 223 | R | A | -2.0849 | |
| 224 | A | A | -1.1068 | |
| 225 | D | A | -0.9803 | |
| 226 | P | A | -0.6355 | |
| 227 | T | A | -0.6275 | |
| 228 | G | A | 0.0000 | |
| 229 | R | A | 0.0000 | |
| 230 | R | A | -0.7150 | |
| 231 | L | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | T | A | -0.5278 | |
| 234 | Y | A | -0.2793 | |
| 235 | D | A | -0.9470 | |
| 236 | R | A | -1.0960 | |
| 237 | Y | A | -0.7671 | |
| 238 | E | A | -1.6691 | |
| 239 | K | A | -1.3306 | |
| 240 | S | A | -1.1206 | |
| 241 | Y | A | -0.8420 | |
| 242 | D | A | -2.3421 | |
| 243 | K | A | -2.3403 | |
| 244 | E | A | -2.0880 | |
| 245 | K | A | -1.9696 | |
| 246 | L | A | 0.0000 | |
| 247 | V | A | 0.0000 | |
| 248 | L | A | 0.0000 | |
| 249 | S | A | 0.0000 | |
| 250 | G | A | -0.1972 | |
| 251 | P | A | 0.3356 | |
| 252 | L | A | 1.4679 | |
| 253 | L | A | 2.3876 | |
| 254 | F | A | 2.5742 | |
| 255 | P | A | 0.9030 | |
| 256 | P | A | 0.2743 | |
| 257 | P | A | -0.7412 | |
| 258 | D | A | -1.5117 | |
| 259 | S | A | -0.8589 | |
| 260 | P | A | 0.0000 | |
| 261 | P | A | -0.6887 | |
| 262 | P | A | -0.1657 | |
| 263 | S | A | 0.3357 | |
| 264 | P | A | 0.5309 | |
| 265 | L | A | 1.6234 | |
| 266 | Y | A | 1.0918 | |
| 267 | T | A | 0.3092 | |
| 268 | P | A | 0.4783 | |
| 269 | P | A | 0.2792 | |
| 270 | A | A | -0.0527 | |
| 271 | P | A | 0.0669 | |
| 272 | T | A | 0.0603 | |
| 273 | S | A | 0.2903 | |
| 274 | P | A | 0.3514 | |
| 275 | Y | A | 1.1160 | |
| 276 | Y | A | 1.0317 | |
| 277 | V | A | 1.7179 | |
| 278 | L | A | 1.1094 | |
| 279 | P | A | 0.2032 | |
| 280 | P | A | 0.0835 | |
| 281 | Y | A | 0.7468 | |
| 282 | N | A | 0.4377 | |
| 283 | Y | A | 1.2064 | |
| 284 | F | A | 0.3440 | |
| 285 | S | A | -0.7279 | |
| 286 | I | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | D | A | 0.0000 | |
| 289 | R | A | 0.0000 | |
| 290 | G | A | -1.3502 | |
| 291 | E | A | -2.0331 | |
| 292 | I | A | -1.6225 | |
| 293 | T | A | -1.8694 | |
| 294 | E | A | -2.6797 | |
| 295 | E | A | -2.8319 | |
| 296 | D | A | -2.0418 | |
| 297 | L | A | -1.1875 | |
| 298 | L | A | -0.9259 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.4420 | |
| 301 | K | A | -1.9276 | |
| 302 | P | A | -0.8163 | |
| 303 | V | A | -0.0181 | |
| 304 | L | A | 0.0578 | |
| 305 | L | A | 0.0000 | |
| 306 | T | A | -0.8264 | |
| 307 | K | A | -1.8055 | |
| 308 | T | A | 0.0000 | |
| 309 | P | A | -1.0267 | |
| 310 | G | A | -0.8623 | |
| 311 | L | A | -0.4289 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | -0.6556 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | L | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | G | A | -1.0294 | |
| 319 | N | A | -1.2234 | |
| 320 | Q | A | -1.4051 | |
| 321 | L | A | 0.0000 | |
| 322 | Y | A | 0.0000 | |
| 323 | I | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | L | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | S | A | 0.0000 | |
| 330 | R | A | 0.0000 | |
| 331 | A | A | 0.0000 | |
| 332 | E | A | -3.0819 | |
| 333 | I | A | -2.3749 | |
| 334 | E | A | -2.6803 | |
| 335 | K | A | -3.0478 | |
| 336 | I | A | -1.3247 | |
| 337 | K | A | -2.0164 | |
| 338 | T | A | -0.3771 | |
| 339 | Q | A | -0.0388 | |
| 340 | L | A | 1.3796 | |
| 341 | S | A | 0.3865 | |
| 342 | T | A | -0.0737 | |
| 343 | P | A | -0.3850 | |
| 344 | P | A | -0.3595 | |
| 345 | I | A | 0.2574 | |
| 346 | N | A | -0.0558 | |
| 347 | V | A | 1.6578 | |
| 348 | Y | A | 1.5444 | |
| 349 | D | A | 0.0651 | |
| 350 | P | A | -0.3736 | |
| 351 | S | A | 0.0563 | |
| 352 | N | A | 0.4639 | |
| 353 | Y | A | 0.3927 | |
| 354 | V | A | 0.4878 | |
| 355 | E | A | -2.0535 | |
| 356 | G | A | -1.7198 | |
| 357 | E | A | -1.9754 | |
| 358 | L | A | -0.7059 | |
| 359 | Y | A | 0.0000 | |
| 360 | S | A | -0.5663 | |
| 361 | R | A | 0.0000 | |
| 362 | K | A | -0.8057 | |
| 363 | Y | A | 0.0000 | |
| 364 | K | A | -0.7713 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | 0.0000 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | V | A | 0.0000 | |
| 370 | R | A | -0.5245 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | R | A | -0.9299 | |
| 374 | I | A | 0.0000 | |
| 375 | P | A | -0.7983 | |
| 376 | L | A | -0.3670 | |
| 377 | T | A | -0.6731 | |
| 378 | P | A | -1.0204 | |
| 379 | E | A | -1.8623 | |
| 380 | T | A | 0.0000 | |
| 381 | L | A | -0.5117 | |
| 382 | A | A | -0.8996 | |
| 383 | L | A | 0.0000 | |
| 384 | L | A | 0.0000 | |
| 385 | A | A | -0.6532 | |
| 386 | R | A | -1.4632 | |
| 387 | L | A | -0.8102 | |
| 388 | D | A | -0.6956 | |
| 389 | P | A | -0.5907 | |
| 390 | S | A | -0.7818 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -0.3095 | |
| 393 | V | A | -0.7134 | |
| 394 | N | A | -1.6137 | |
| 395 | A | A | -1.4473 | |
| 396 | K | A | -1.8318 | |
| 397 | L | A | 0.0000 | |
| 398 | P | A | 0.3014 | |
| 399 | F | A | 1.7041 | |
| 400 | I | A | 0.9153 | |
| 401 | P | A | 0.3359 | |
| 402 | P | A | -0.2486 | |
| 403 | V | A | 0.2733 | |
| 404 | E | A | -2.0099 | |
| 405 | R | A | -2.4701 | |
| 406 | P | A | -2.0899 | |
| 407 | D | A | -2.6309 | |
| 408 | P | A | -1.4493 | |
| 409 | L | A | -1.0953 | |
| 410 | A | A | -1.2554 | |
| 411 | G | A | -1.3825 | |
| 412 | K | A | -1.7039 | |
| 413 | K | A | -2.4035 | |
| 414 | F | A | -1.4095 | |
| 415 | I | A | -1.1611 | |
| 416 | E | A | -2.5561 | |
| 417 | L | A | -2.1904 | |
| 418 | D | A | -3.2030 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -2.1255 | |
| 421 | D | A | -2.6862 | |
| 422 | K | A | -2.2760 | |
| 423 | L | A | -0.8683 | |
| 424 | S | A | -0.8694 | |
| 425 | S | A | -0.5331 | |
| 426 | D | A | -1.3226 | |
| 427 | L | A | 0.0000 | |
| 428 | S | A | -1.4484 | |
| 429 | K | A | -2.1867 | |
| 430 | Y | A | -1.1910 | |
| 431 | P | A | -0.8934 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.6043 | |
| 435 | W | A | -0.5788 | |
| 436 | Y | A | -0.2618 | |
| 437 | L | A | 0.0448 | |
| 438 | N | A | -1.6142 | |
| 439 | R | A | -2.0072 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine