Project name: 1JSF

Status: done

Started: 2025-07-19 06:23:52
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Chain sequence(s) A: KVFERCELARTLKRLGMDGYRGISLANWMCLAKWESGYNTRATNYNAGDRSTDYGIFQINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQGIRAWVAWRNRCQNRDVRQYVQGCGV
input PDB
Selected Chain(s) A
Distance of aggregation 5 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:25)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:26)
Show buried residues

Minimal score value
-2.4095
Maximal score value
1.8718
Average score
-0.4057
Total score value
-52.7378

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 K A -1.2099
2 V A 1.4392
3 F A 0.0000
4 E A -1.8994
5 R A -0.7531
6 C A -0.1183
7 E A -0.6405
8 L A 0.0000
9 A A 0.0000
10 R A -1.8441
11 T A 0.0000
12 L A 0.0000
13 K A -1.3210
14 R A -1.9462
15 L A 0.0124
16 G A -0.2852
17 M A 0.0000
18 D A -1.2186
19 G A -0.6691
20 Y A -0.1703
21 R A -1.8860
22 G A -0.8640
23 I A 0.0000
24 S A -0.1470
25 L A 0.0000
26 A A -0.0381
27 N A -0.2393
28 W A 0.0000
29 M A 0.0000
30 C A 0.0000
31 L A 0.0000
32 A A 0.0000
33 K A -0.7266
34 W A 0.2851
35 E A -0.2762
36 S A -0.1568
37 G A -0.4451
38 Y A 0.0000
39 N A -0.1077
40 T A 0.0000
41 R A -1.8425
42 A A -0.3410
43 T A -0.2217
44 N A -0.6175
45 Y A 1.0860
46 N A -0.1440
47 A A -0.1007
48 G A -0.7219
49 D A -1.8548
50 R A -2.0896
51 S A 0.0000
52 T A 0.1346
53 D A -0.2460
54 Y A 0.0000
55 G A 0.0000
56 I A 0.0000
57 F A 0.0000
58 Q A 0.0000
59 I A 0.0000
60 N A -0.2305
61 S A 0.0000
62 R A 0.0067
63 Y A 1.4786
64 W A 0.3655
65 C A 0.0000
66 N A -0.8045
67 D A -0.5738
68 G A -0.8456
69 K A -1.7860
70 T A 0.0000
71 P A -0.2675
72 G A -0.4951
73 A A 0.2363
74 V A 1.8718
75 N A 0.1272
76 A A 0.0028
77 C A -0.0820
78 H A -0.9208
79 L A 0.0541
80 S A -0.1941
81 C A 0.0000
82 S A -0.2115
83 A A -0.0319
84 L A 0.0000
85 L A 0.1473
86 Q A -0.9047
87 D A -2.1388
88 N A -1.6027
89 I A 0.0000
90 A A -0.1067
91 D A -0.7406
92 A A 0.0000
93 V A 0.0000
94 A A 0.0582
95 C A 0.0000
96 A A 0.0000
97 K A -0.4713
98 R A -1.0809
99 V A 0.0000
100 V A 0.0000
101 R A -1.9313
102 D A -1.2568
103 P A -0.5340
104 Q A -0.7075
105 G A -0.1778
106 I A 0.0000
107 R A -1.6230
108 A A -0.2765
109 W A 0.0000
110 V A 1.7746
111 A A 0.3579
112 W A -0.1441
113 R A -1.7199
114 N A -1.7419
115 R A -1.3069
116 C A 0.0000
117 Q A -0.7809
118 N A -1.6888
119 R A -2.4095
120 D A -2.0957
121 V A -0.4862
122 R A -2.0307
123 Q A -1.5051
124 Y A -0.0196
125 V A 0.0435
126 Q A -1.1933
127 G A -0.6803
128 C A 0.0000
129 G A -0.2673
130 V A 0.9887
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Laboratory of Theory of Biopolymers 2018