| Chain sequence(s) |
A: GVPLTNPGPEVRHTSEYVTPTDLLYIAETDLITETGHPTKDIVVNGKVVVPKVNAYQYRVFLLTLPDPNTLPLPSADFIDRSTEILIWQLRAFYIGVGGPLGKGSYGHPNFNALGDIDNPTAPLHGGPNDTVNLSWTPILKQSYIIGDLPPLGKYIAPAPPEPGLPPGAEPPLKEVHTLIEHGDMADIGFGAKDFKALEPRKDEVPEIILDTTTKVFDIEGMKADPYGRRMFDYDEYESSKDSKTLVRDGPDLHPLPDAGPPSPLYVPPPPTSPYAVRPPTDTFTLPDAGEITEEDLLFNKPIFLEKTEGKNQGILWHNRLYVTVLDNRRAEIETISTQKCTPTVNVYDPSCYETSKRYTREYRLSLIVQLCKIPLTPETLAFIERLDPRILVDSNLPDIPPVERPDPLAGKKFIEIDLTDKLSSDLEKYELGRLYLNR
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:06)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | 0.5467 | |
| 2 | V | A | 1.8243 | |
| 3 | P | A | 0.9876 | |
| 4 | L | A | 1.4107 | |
| 5 | T | A | 0.1142 | |
| 6 | N | A | -1.2355 | |
| 7 | P | A | -1.2471 | |
| 8 | G | A | -1.4998 | |
| 9 | P | A | -1.7194 | |
| 10 | E | A | -2.0932 | |
| 11 | V | A | -1.1576 | |
| 12 | R | A | -1.3586 | |
| 13 | H | A | -1.4475 | |
| 14 | T | A | 0.0000 | |
| 15 | S | A | -1.4243 | |
| 16 | E | A | -2.1649 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | T | A | -0.6549 | |
| 20 | P | A | -0.7584 | |
| 21 | T | A | -0.9165 | |
| 22 | D | A | -1.6281 | |
| 23 | L | A | -0.4988 | |
| 24 | L | A | -0.2092 | |
| 25 | Y | A | -0.1190 | |
| 26 | I | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | E | A | -1.2741 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -1.5132 | |
| 31 | L | A | 0.0048 | |
| 32 | I | A | -0.1027 | |
| 33 | T | A | -0.3625 | |
| 34 | E | A | -0.5298 | |
| 35 | T | A | -0.4472 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -1.3226 | |
| 38 | P | A | 0.0000 | |
| 39 | T | A | -1.5482 | |
| 40 | K | A | -2.0830 | |
| 41 | D | A | -0.7938 | |
| 42 | I | A | 1.3231 | |
| 43 | V | A | 2.2982 | |
| 44 | V | A | 1.7764 | |
| 45 | N | A | -0.4737 | |
| 46 | G | A | -0.3081 | |
| 47 | K | A | -0.0724 | |
| 48 | V | A | 2.0068 | |
| 49 | V | A | 2.5713 | |
| 50 | V | A | 1.2116 | |
| 51 | P | A | -0.1096 | |
| 52 | K | A | -1.1447 | |
| 53 | V | A | 0.0000 | |
| 54 | N | A | 0.0000 | |
| 55 | A | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | Y | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | L | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | T | A | -1.4985 | |
| 65 | L | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -0.8651 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -0.8011 | |
| 70 | T | A | -0.2448 | |
| 71 | L | A | -0.0416 | |
| 72 | P | A | -0.1198 | |
| 73 | L | A | -0.1013 | |
| 74 | P | A | -0.3547 | |
| 75 | S | A | -0.6687 | |
| 76 | A | A | -1.0196 | |
| 77 | D | A | -2.2354 | |
| 78 | F | A | -1.1548 | |
| 79 | I | A | 0.0000 | |
| 80 | D | A | -3.0925 | |
| 81 | R | A | -3.0562 | |
| 82 | S | A | -1.7661 | |
| 83 | T | A | -1.4394 | |
| 84 | E | A | -1.6551 | |
| 85 | I | A | 0.0000 | |
| 86 | L | A | 0.0000 | |
| 87 | I | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | Q | A | -0.3593 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.7646 | |
| 92 | A | A | 0.0000 | |
| 93 | F | A | 0.0000 | |
| 94 | Y | A | -0.6503 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | 0.0000 | |
| 97 | V | A | 0.0000 | |
| 98 | G | A | -0.6562 | |
| 99 | G | A | -0.8990 | |
| 100 | P | A | -0.6697 | |
| 101 | L | A | -0.5240 | |
| 102 | G | A | -1.0040 | |
| 103 | K | A | -1.3481 | |
| 104 | G | A | 0.0000 | |
| 105 | S | A | -0.6167 | |
| 106 | Y | A | 0.0000 | |
| 107 | G | A | -0.9628 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | -1.3456 | |
| 110 | N | A | -2.0948 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | 0.0000 | |
| 113 | A | A | 0.0000 | |
| 114 | L | A | -0.2411 | |
| 115 | G | A | -0.5185 | |
| 116 | D | A | -1.0452 | |
| 117 | I | A | -0.3861 | |
| 118 | D | A | -2.2250 | |
| 119 | N | A | -2.1183 | |
| 120 | P | A | -1.0251 | |
| 121 | T | A | -0.6039 | |
| 122 | A | A | -0.0792 | |
| 123 | P | A | 0.3166 | |
| 124 | L | A | 0.1184 | |
| 125 | H | A | -0.5372 | |
| 126 | G | A | -1.2346 | |
| 127 | G | A | -1.1979 | |
| 128 | P | A | -1.2109 | |
| 129 | N | A | -1.8502 | |
| 130 | D | A | -1.4921 | |
| 131 | T | A | -1.1739 | |
| 132 | V | A | -0.5590 | |
| 133 | N | A | -1.3164 | |
| 134 | L | A | -0.6019 | |
| 135 | S | A | -0.5073 | |
| 136 | W | A | 0.0000 | |
| 137 | T | A | -0.6539 | |
| 138 | P | A | 0.0000 | |
| 139 | I | A | 0.0000 | |
| 140 | L | A | 0.0000 | |
| 141 | K | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | S | A | 0.0000 | |
| 144 | Y | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | I | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | D | A | 0.0000 | |
| 149 | L | A | 0.0804 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | L | A | -0.0932 | |
| 153 | G | A | 0.0000 | |
| 154 | K | A | -0.5948 | |
| 155 | Y | A | -0.6061 | |
| 156 | I | A | -0.1690 | |
| 157 | A | A | 0.0000 | |
| 158 | P | A | -0.2942 | |
| 159 | A | A | -0.5166 | |
| 160 | P | A | -0.8402 | |
| 161 | P | A | -1.3514 | |
| 162 | E | A | -2.0795 | |
| 163 | P | A | -1.2943 | |
| 164 | G | A | -0.8163 | |
| 165 | L | A | -0.5562 | |
| 166 | P | A | -0.4907 | |
| 167 | P | A | -0.7137 | |
| 168 | G | A | -0.9925 | |
| 169 | A | A | -1.1145 | |
| 170 | E | A | -1.7588 | |
| 171 | P | A | -1.1328 | |
| 172 | P | A | -0.5184 | |
| 173 | L | A | 0.2567 | |
| 174 | K | A | -1.1212 | |
| 175 | E | A | -1.8098 | |
| 176 | V | A | -0.9916 | |
| 177 | H | A | -0.9641 | |
| 178 | T | A | -0.4015 | |
| 179 | L | A | -0.0980 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | -1.0914 | |
| 182 | H | A | -0.9875 | |
| 183 | G | A | -0.7296 | |
| 184 | D | A | -0.7363 | |
| 185 | M | A | 0.0000 | |
| 186 | A | A | 0.0000 | |
| 187 | D | A | -0.2595 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | -0.4570 | |
| 190 | F | A | -0.0769 | |
| 191 | G | A | -0.1501 | |
| 192 | A | A | -0.2999 | |
| 193 | K | A | -0.6870 | |
| 194 | D | A | -0.8952 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -2.7144 | |
| 197 | A | A | -1.0812 | |
| 198 | L | A | -0.8544 | |
| 199 | E | A | 0.0000 | |
| 200 | P | A | -1.8644 | |
| 201 | R | A | -2.4727 | |
| 202 | K | A | -3.0855 | |
| 203 | D | A | -2.0034 | |
| 204 | E | A | -1.5059 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | E | A | -1.8814 | |
| 208 | I | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | L | A | -1.8377 | |
| 211 | D | A | -2.4559 | |
| 212 | T | A | -1.4058 | |
| 213 | T | A | -0.8317 | |
| 214 | T | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | V | A | 0.1145 | |
| 217 | F | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | I | A | -1.0708 | |
| 220 | E | A | -2.3526 | |
| 221 | G | A | -1.6830 | |
| 222 | M | A | 0.0000 | |
| 223 | K | A | -2.7887 | |
| 224 | A | A | -1.4670 | |
| 225 | D | A | -1.2889 | |
| 226 | P | A | -0.8334 | |
| 227 | Y | A | -0.3573 | |
| 228 | G | A | 0.0000 | |
| 229 | R | A | 0.0000 | |
| 230 | R | A | -0.6153 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | D | A | -0.9532 | |
| 234 | Y | A | -0.6004 | |
| 235 | D | A | -1.1837 | |
| 236 | E | A | -1.3061 | |
| 237 | Y | A | -1.2471 | |
| 238 | E | A | -1.7380 | |
| 239 | S | A | -1.5328 | |
| 240 | S | A | -2.2411 | |
| 241 | K | A | -3.2548 | |
| 242 | D | A | -3.1137 | |
| 243 | S | A | -2.2737 | |
| 244 | K | A | -2.2381 | |
| 245 | T | A | -1.2363 | |
| 246 | L | A | 0.0000 | |
| 247 | V | A | 0.0000 | |
| 248 | R | A | 0.0000 | |
| 249 | D | A | -1.2476 | |
| 250 | G | A | -0.7965 | |
| 251 | P | A | -0.6354 | |
| 252 | D | A | -0.7674 | |
| 253 | L | A | 0.4445 | |
| 254 | H | A | -0.7121 | |
| 255 | P | A | -0.9422 | |
| 256 | L | A | -0.0969 | |
| 257 | P | A | -0.9332 | |
| 258 | D | A | -1.8673 | |
| 259 | A | A | -0.7455 | |
| 260 | G | A | -1.0706 | |
| 261 | P | A | -0.3433 | |
| 262 | P | A | -0.1067 | |
| 263 | S | A | 0.3194 | |
| 264 | P | A | 0.5906 | |
| 265 | L | A | 1.8654 | |
| 266 | Y | A | 2.1230 | |
| 267 | V | A | 2.0614 | |
| 268 | P | A | 1.0323 | |
| 269 | P | A | 0.5335 | |
| 270 | P | A | 0.0457 | |
| 271 | P | A | -0.0462 | |
| 272 | T | A | -0.0053 | |
| 273 | S | A | 0.2895 | |
| 274 | P | A | 0.4046 | |
| 275 | Y | A | 1.2441 | |
| 276 | A | A | 0.9317 | |
| 277 | V | A | 1.5330 | |
| 278 | R | A | 0.2477 | |
| 279 | P | A | -0.2838 | |
| 280 | P | A | -0.9320 | |
| 281 | T | A | -0.9959 | |
| 282 | D | A | -1.8555 | |
| 283 | T | A | -0.6561 | |
| 284 | F | A | -0.4174 | |
| 285 | T | A | -1.0010 | |
| 286 | L | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | D | A | -2.0629 | |
| 289 | A | A | 0.0000 | |
| 290 | G | A | -1.9347 | |
| 291 | E | A | -2.2572 | |
| 292 | I | A | -1.3132 | |
| 293 | T | A | -2.1185 | |
| 294 | E | A | -3.1727 | |
| 295 | E | A | -3.4719 | |
| 296 | D | A | -2.9208 | |
| 297 | L | A | -1.8455 | |
| 298 | L | A | -1.2588 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.3413 | |
| 301 | K | A | -1.6084 | |
| 302 | P | A | -0.6657 | |
| 303 | I | A | -0.1358 | |
| 304 | F | A | -0.3675 | |
| 305 | L | A | 0.0000 | |
| 306 | E | A | -2.5870 | |
| 307 | K | A | -3.1747 | |
| 308 | T | A | -2.3970 | |
| 309 | E | A | -2.7859 | |
| 310 | G | A | -2.1197 | |
| 311 | K | A | -1.6990 | |
| 312 | N | A | 0.0000 | |
| 313 | Q | A | -1.6858 | |
| 314 | G | A | 0.0000 | |
| 315 | I | A | 0.0000 | |
| 316 | L | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.8498 | |
| 319 | N | A | -0.8927 | |
| 320 | R | A | -0.9419 | |
| 321 | L | A | 0.0000 | |
| 322 | Y | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | L | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | R | A | 0.0000 | |
| 330 | R | A | 0.0000 | |
| 331 | A | A | 0.0000 | |
| 332 | E | A | -2.0808 | |
| 333 | I | A | -1.5692 | |
| 334 | E | A | -1.9829 | |
| 335 | T | A | -0.9384 | |
| 336 | I | A | -0.0069 | |
| 337 | S | A | -0.7262 | |
| 338 | T | A | -0.9983 | |
| 339 | Q | A | -1.8504 | |
| 340 | K | A | -2.1405 | |
| 341 | C | A | -0.8721 | |
| 342 | T | A | -0.3007 | |
| 343 | P | A | 0.2410 | |
| 344 | T | A | 1.0107 | |
| 345 | V | A | 1.7595 | |
| 346 | N | A | 0.5976 | |
| 347 | V | A | 1.9807 | |
| 348 | Y | A | 1.6434 | |
| 349 | D | A | 0.0120 | |
| 350 | P | A | -0.3702 | |
| 351 | S | A | -0.8026 | |
| 352 | C | A | -0.9864 | |
| 353 | Y | A | -1.0926 | |
| 354 | E | A | -1.6423 | |
| 355 | T | A | -0.7738 | |
| 356 | S | A | -0.9682 | |
| 357 | K | A | -1.5313 | |
| 358 | R | A | -1.4227 | |
| 359 | Y | A | 0.0000 | |
| 360 | T | A | -0.8685 | |
| 361 | R | A | 0.0000 | |
| 362 | E | A | -0.6860 | |
| 363 | Y | A | 0.0000 | |
| 364 | R | A | -1.3535 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | 0.0000 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | V | A | 0.0000 | |
| 370 | Q | A | -0.4222 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.6676 | |
| 374 | I | A | 0.0000 | |
| 375 | P | A | -0.8426 | |
| 376 | L | A | -0.5155 | |
| 377 | T | A | -0.6243 | |
| 378 | P | A | -0.9667 | |
| 379 | E | A | -1.8981 | |
| 380 | T | A | 0.0000 | |
| 381 | L | A | -0.7060 | |
| 382 | A | A | -1.2010 | |
| 383 | F | A | 0.0000 | |
| 384 | I | A | 0.0000 | |
| 385 | E | A | -1.9037 | |
| 386 | R | A | -1.9878 | |
| 387 | L | A | -0.9079 | |
| 388 | D | A | 0.0000 | |
| 389 | P | A | -1.1332 | |
| 390 | R | A | -1.4441 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | 0.0000 | |
| 393 | V | A | -0.9378 | |
| 394 | D | A | -1.7174 | |
| 395 | S | A | -1.3032 | |
| 396 | N | A | -1.7663 | |
| 397 | L | A | -1.3290 | |
| 398 | P | A | -1.1874 | |
| 399 | D | A | -1.8362 | |
| 400 | I | A | -0.7891 | |
| 401 | P | A | -0.6007 | |
| 402 | P | A | -1.1386 | |
| 403 | V | A | -1.1747 | |
| 404 | E | A | -2.7605 | |
| 405 | R | A | -3.0196 | |
| 406 | P | A | -1.9938 | |
| 407 | D | A | -1.7228 | |
| 408 | P | A | -1.0732 | |
| 409 | L | A | -0.7521 | |
| 410 | A | A | -0.9621 | |
| 411 | G | A | -1.3182 | |
| 412 | K | A | -1.8277 | |
| 413 | K | A | -2.4544 | |
| 414 | F | A | -1.3523 | |
| 415 | I | A | -1.0453 | |
| 416 | E | A | -2.1601 | |
| 417 | I | A | -1.6989 | |
| 418 | D | A | -2.5769 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -1.6478 | |
| 421 | D | A | -2.3633 | |
| 422 | K | A | -1.9738 | |
| 423 | L | A | -0.7606 | |
| 424 | S | A | -0.8208 | |
| 425 | S | A | -0.7794 | |
| 426 | D | A | -1.8992 | |
| 427 | L | A | 0.0000 | |
| 428 | E | A | -3.3663 | |
| 429 | K | A | -3.3813 | |
| 430 | Y | A | -2.5226 | |
| 431 | E | A | -2.7591 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -2.7758 | |
| 435 | L | A | -0.9859 | |
| 436 | Y | A | -0.6645 | |
| 437 | L | A | -0.3938 | |
| 438 | N | A | -1.6327 | |
| 439 | R | A | -1.9522 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine