Project name: seq

Status: done

Started: 2026-04-10 11:09:09
Settings
Chain sequence(s) A: ERLRPLGGTIAVRLLEPVPPGRGGRLLLGKIGEESREAVVLEVGPGRRDRGEGVEPSDLEPGDRVLLRLDERVERVRVNGEEVLLLPESSVLAKWVK
C: ERLRPLGGTIAVRLLEPVPPGRGGRLLLGKIGEESREAVVLEVGPGRRDRGEGVEPSDLEPGDRVLLRLDERVERVRVNGEEVLLLPESSVLAKWVK
B: ERLRPLGGTIAVRLLEPVPPGRGGRLLLGKIGEESREAVVLEVGPGRRDRGEGVEPSDLEPGDRVLLRLDERVERVRVNGEEVLLLPESSVLAKWVK
E: ERLRPLGGTIAVRLLEPVPPGRGGRLLLGKIGEESREAVVLEVGPGRRDRGEGVEPSDLEPGDRVLLRLDERVERVRVNGEEVLLLPESSVLAKWVK
D: ERLRPLGGTIAVRLLEPVPPGRGGRLLLGKIGEESREAVVLEVGPGRRDRGEGVEPSDLEPGDRVLLRLDERVERVRVNGEEVLLLPESSVLAKWVK
G: ERLRPLGGTIAVRLLEPVPPGRGGRLLLGKIGEESREAVVLEVGPGRRDRGEGVEPSDLEPGDRVLLRLDERVERVRVNGEEVLLLPESSVLAKWVK
F: ERLRPLGGTIAVRLLEPVPPGRGGRLLLGKIGEESREAVVLEVGPGRRDRGEGVEPSDLEPGDRVLLRLDERVERVRVNGEEVLLLPESSVLAKWVK
input PDB
Selected Chain(s) A,C,B,E,D,G,F
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:13:27)
[INFO]       Main:     Simulation completed successfully.                                          (00:13:34)
Show buried residues

Minimal score value
-3.3315
Maximal score value
0.177
Average score
-1.0961
Total score value
-744.2298

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 E A -3.3274
2 R A -3.0280
3 L A 0.0000
4 R A -1.0884
5 P A 0.0000
6 L A -0.4610
7 G A -0.9938
8 G A -1.0990
9 T A -0.4393
10 I A 0.0000
11 A A 0.0000
12 V A 0.0000
13 R A -0.6031
14 L A -0.5487
15 L A -0.6619
16 E A -1.7148
17 P A -0.8837
18 V A -0.4675
19 P A -0.9611
20 P A -1.0928
21 G A -1.5470
22 R A -2.3467
23 G A -2.1283
24 G A -1.4670
25 R A -1.3392
26 L A -1.0313
27 L A -0.7170
28 L A -0.8949
29 G A -1.7755
30 K A -2.1459
31 I A -1.5711
32 G A -2.0381
33 E A -3.0124
34 E A -2.5277
35 S A 0.0000
36 R A -1.4529
37 E A -0.8556
38 A A 0.0000
39 V A -0.2436
40 V A 0.0000
41 L A 0.1770
42 E A 0.0000
43 V A -0.3521
44 G A 0.0000
45 P A -0.6754
46 G A 0.0000
47 R A -2.3865
48 R A -2.2440
49 D A -2.4105
50 R A -2.4337
51 G A -2.6515
52 E A -3.3315
53 G A -2.2266
54 V A -1.5955
55 E A -2.1741
56 P A -1.0915
57 S A -1.1433
58 D A -1.1647
59 L A 0.0000
60 E A -2.1233
61 P A -1.1213
62 G A -1.0802
63 D A -1.1962
64 R A -0.8564
65 V A 0.0000
66 L A 0.0000
67 L A 0.0000
68 R A -1.2998
69 L A -1.4516
70 D A -1.8875
71 E A -2.7028
72 R A -1.9285
73 V A 0.0000
74 E A 0.0000
75 R A -0.7649
76 V A 0.0000
77 R A -1.7494
78 V A -2.0575
79 N A -2.5003
80 G A -2.0577
81 E A -2.1054
82 E A -1.6246
83 V A 0.0000
84 L A 0.0000
85 L A 0.0000
86 L A 0.0000
87 P A -0.6332
88 E A -0.7527
89 S A -0.6109
90 S A 0.0000
91 V A 0.0000
92 L A -0.1386
93 A A 0.0000
94 K A -0.9227
95 W A 0.0000
96 V A -1.6764
97 K A -2.5256
1 E B -3.2397
2 R B -2.9256
3 L B 0.0000
4 R B -1.2961
5 P B 0.0000
6 L B 0.0000
7 G B -1.0732
8 G B -1.1865
9 T B -0.6278
10 I B 0.0000
11 A B 0.0000
12 V B 0.0000
13 R B -0.6709
14 L B -0.4665
15 L B -0.7252
16 E B -1.8120
17 P B -1.0672
18 V B -0.9145
19 P B -1.1967
20 P B -1.1279
21 G B -1.6104
22 R B -2.4617
23 G B -2.1864
24 G B -1.6643
25 R B -1.4595
26 L B -0.9975
27 L B -0.5380
28 L B -0.5653
29 G B -1.5505
30 K B -1.9922
31 I B -1.3849
32 G B -1.8836
33 E B -2.7442
34 E B -2.2443
35 S B 0.0000
36 R B -1.1880
37 E B 0.0000
38 A B 0.0000
39 V B -0.3340
40 V B 0.0000
41 L B -0.3240
42 E B -0.8478
43 V B 0.0000
44 G B 0.0000
45 P B -0.7951
46 G B 0.0000
47 R B -2.2824
48 R B -1.9157
49 D B -2.2761
50 R B -2.3058
51 G B -2.4921
52 E B -2.9377
53 G B -1.8342
54 V B -0.7757
55 E B -1.8605
56 P B -0.9470
57 S B -1.1542
58 D B -1.2361
59 L B 0.0000
60 E B -2.2514
61 P B -1.2939
62 G B -1.1767
63 D B -1.2795
64 R B -0.8739
65 V B 0.0000
66 L B 0.0000
67 L B 0.0000
68 R B -1.1682
69 L B -1.3369
70 D B -1.7359
71 E B -2.6649
72 R B -1.9166
73 V B 0.0000
74 E B 0.0000
75 R B -0.7010
76 V B 0.0000
77 R B -1.7522
78 V B -2.0284
79 N B -2.4990
80 G B -1.9006
81 E B -2.1693
82 E B -1.5685
83 V B 0.0000
84 L B 0.0000
85 L B 0.0000
86 L B 0.0000
87 P B -0.7140
88 E B -0.8113
89 S B -0.4220
90 S B 0.0000
91 V B 0.0000
92 L B -0.0759
93 A B 0.0000
94 K B -0.9082
95 W B 0.0000
96 V B -1.7784
97 K B -2.6742
1 E C -2.8960
2 R C -3.0761
3 L C 0.0000
4 R C -1.2397
5 P C 0.0000
6 L C 0.0000
7 G C -1.1335
8 G C -1.2398
9 T C -0.6057
10 I C 0.0000
11 A C 0.0000
12 V C 0.0000
13 R C -0.8900
14 L C -0.5961
15 L C -0.6104
16 E C -1.7155
17 P C -0.9642
18 V C -0.6896
19 P C -1.0615
20 P C -1.1735
21 G C -1.5542
22 R C -2.4119
23 G C -2.2091
24 G C -1.6804
25 R C -1.7728
26 L C -1.2344
27 L C -0.7941
28 L C -0.9870
29 G C -1.6646
30 K C -2.2838
31 I C -1.8611
32 G C -2.1195
33 E C -3.0252
34 E C -2.5137
35 S C 0.0000
36 R C -1.3228
37 E C -0.8277
38 A C 0.0000
39 V C -0.2833
40 V C 0.0000
41 L C -0.1891
42 E C -0.8380
43 V C -0.6294
44 G C 0.0000
45 P C -0.7131
46 G C 0.0000
47 R C -2.4335
48 R C -2.2016
49 D C 0.0000
50 R C -2.8143
51 G C -2.9407
52 E C -3.2841
53 G C -2.1497
54 V C -1.4457
55 E C -1.7942
56 P C -1.0432
57 S C -1.3200
58 D C -1.6191
59 L C 0.0000
60 E C -2.2960
61 P C -1.2475
62 G C -1.1527
63 D C -1.2682
64 R C -0.8276
65 V C 0.0000
66 L C 0.0000
67 L C 0.0000
68 R C -1.3628
69 L C -1.4718
70 D C -1.9059
71 E C -2.7498
72 R C -1.9577
73 V C 0.0000
74 E C 0.0000
75 R C -1.0966
76 V C 0.0000
77 R C -2.1663
78 V C -2.2492
79 N C -2.6123
80 G C -2.3293
81 E C -2.8057
82 E C -2.4036
83 V C 0.0000
84 L C 0.0000
85 L C 0.0000
86 L C 0.0000
87 P C -0.7137
88 E C -0.9052
89 S C -0.6880
90 S C 0.0000
91 V C 0.0000
92 L C 0.0000
93 A C 0.0000
94 K C -0.9177
95 W C 0.0000
96 V C -1.4267
97 K C -2.3453
1 E D -2.6118
2 R D -2.6080
3 L D 0.0000
4 R D -1.1744
5 P D 0.0000
6 L D 0.0000
7 G D -1.1540
8 G D -1.1878
9 T D -0.6429
10 I D 0.0000
11 A D 0.0000
12 V D 0.0000
13 R D -1.1228
14 L D -0.6287
15 L D -0.5802
16 E D -1.6587
17 P D -0.8470
18 V D -0.4673
19 P D -0.9714
20 P D -1.0195
21 G D -1.5382
22 R D -2.3341
23 G D -2.1210
24 G D -1.5021
25 R D -1.4515
26 L D -1.0262
27 L D -0.6818
28 L D -0.8582
29 G D -1.6484
30 K D -2.0695
31 I D -1.4559
32 G D -1.8248
33 E D -2.5871
34 E D -2.1415
35 S D 0.0000
36 R D -1.2842
37 E D -0.8529
38 A D 0.0000
39 V D -0.4950
40 V D 0.0000
41 L D -0.5400
42 E D -0.9479
43 V D 0.0000
44 G D 0.0000
45 P D -0.7853
46 G D 0.0000
47 R D -2.1364
48 R D -1.8087
49 D D 0.0000
50 R D -2.4920
51 G D -2.6477
52 E D -3.0258
53 G D -1.8309
54 V D -1.0233
55 E D -1.7329
56 P D -0.9075
57 S D -1.1064
58 D D -1.1709
59 L D 0.0000
60 E D -2.2526
61 P D -1.3225
62 G D -1.2471
63 D D -1.2949
64 R D -0.9846
65 V D 0.0000
66 L D 0.0000
67 L D 0.0000
68 R D -1.2148
69 L D -1.3394
70 D D -1.8171
71 E D -2.8362
72 R D -2.1710
73 V D 0.0000
74 E D 0.0000
75 R D -1.2136
76 V D 0.0000
77 R D -2.2548
78 V D -2.2961
79 N D -2.6170
80 G D -2.3386
81 E D -2.7362
82 E D -2.4367
83 V D 0.0000
84 L D 0.0000
85 L D 0.0000
86 L D 0.0000
87 P D -0.7481
88 E D -0.7857
89 S D -0.4547
90 S D 0.0000
91 V D 0.0000
92 L D 0.0000
93 A D 0.0000
94 K D -0.8638
95 W D 0.0000
96 V D -1.4460
97 K D -2.4013
1 E E -2.7760
2 R E -2.5995
3 L E 0.0000
4 R E -1.0804
5 P E 0.0000
6 L E 0.0000
7 G E -1.0011
8 G E -1.1036
9 T E -0.5576
10 I E 0.0000
11 A E 0.0000
12 V E 0.0000
13 R E -0.7968
14 L E -0.5301
15 L E -0.6687
16 E E -1.7458
17 P E -0.9432
18 V E -0.6949
19 P E -1.0548
20 P E -1.0690
21 G E -1.5704
22 R E -2.3914
23 G E -2.1863
24 G E -1.6580
25 R E -1.4884
26 L E -1.0029
27 L E -0.5623
28 L E -0.6814
29 G E -1.3578
30 K E -1.9204
31 I E -1.1879
32 G E -1.7176
33 E E -2.6558
34 E E -2.2288
35 S E 0.0000
36 R E -1.1393
37 E E 0.0000
38 A E 0.0000
39 V E -0.2773
40 V E 0.0000
41 L E -0.2321
42 E E -0.8040
43 V E -0.6077
44 G E 0.0000
45 P E -0.6504
46 G E 0.0000
47 R E -2.3922
48 R E -2.1297
49 D E -2.4072
50 R E -2.5648
51 G E -2.6466
52 E E -3.1602
53 G E -2.0774
54 V E -1.2711
55 E E -1.9682
56 P E -1.0169
57 S E -1.2905
58 D E -1.6245
59 L E 0.0000
60 E E -2.3026
61 P E -1.2720
62 G E -1.1535
63 D E -1.2550
64 R E -0.7072
65 V E 0.0000
66 L E 0.0000
67 L E 0.0000
68 R E -1.1631
69 L E -1.3283
70 D E 0.0000
71 E E -2.6263
72 R E -1.9236
73 V E 0.0000
74 E E 0.0000
75 R E -1.0514
76 V E 0.0000
77 R E -2.0626
78 V E -2.1473
79 N E -2.5398
80 G E -2.0797
81 E E -2.5705
82 E E -2.1544
83 V E 0.0000
84 L E 0.0000
85 L E 0.0000
86 L E 0.0000
87 P E -0.6592
88 E E -0.7469
89 S E -0.5815
90 S E 0.0000
91 V E 0.0000
92 L E -0.1115
93 A E 0.0000
94 K E -0.8763
95 W E 0.0000
96 V E -1.6454
97 K E -2.5681
1 E F -3.2513
2 R F -2.9271
3 L F 0.0000
4 R F -1.1934
5 P F 0.0000
6 L F 0.0000
7 G F -1.0623
8 G F -1.1344
9 T F -0.5593
10 I F 0.0000
11 A F 0.0000
12 V F 0.0000
13 R F -0.8988
14 L F -0.6350
15 L F -0.7365
16 E F -1.7896
17 P F -1.0361
18 V F -0.8209
19 P F -1.1173
20 P F -1.0950
21 G F -1.5637
22 R F -2.4025
23 G F -2.1556
24 G F -1.6576
25 R F -1.6262
26 L F -1.0387
27 L F -0.5425
28 L F -0.5362
29 G F -1.5150
30 K F -1.9452
31 I F -1.3026
32 G F -1.8379
33 E F -2.7891
34 E F -2.1509
35 S F 0.0000
36 R F -1.2391
37 E F -0.8496
38 A F 0.0000
39 V F -0.3152
40 V F 0.0000
41 L F -0.2059
42 E F -0.7861
43 V F -0.6082
44 G F 0.0000
45 P F -0.6936
46 G F 0.0000
47 R F -2.3578
48 R F -1.9708
49 D F -2.3211
50 R F -2.6125
51 G F -2.4792
52 E F -2.7337
53 G F -1.7470
54 V F -1.0004
55 E F -1.8022
56 P F -0.9810
57 S F -1.2769
58 D F -1.6214
59 L F 0.0000
60 E F -2.2691
61 P F -1.1980
62 G F -1.1266
63 D F -1.2474
64 R F -0.8218
65 V F 0.0000
66 L F 0.0000
67 L F 0.0000
68 R F -1.2317
69 L F -1.3813
70 D F -1.8038
71 E F -2.7287
72 R F -1.9468
73 V F 0.0000
74 E F 0.0000
75 R F -1.1747
76 V F 0.0000
77 R F -2.1914
78 V F -2.3237
79 N F -2.6725
80 G F -2.1532
81 E F -2.7232
82 E F -2.4847
83 V F 0.0000
84 L F 0.0000
85 L F 0.0000
86 L F 0.0000
87 P F -0.6512
88 E F -0.7503
89 S F -0.5883
90 S F 0.0000
91 V F 0.0000
92 L F -0.1380
93 A F 0.0000
94 K F -0.9785
95 W F 0.0000
96 V F -1.6194
97 K F -2.5960
1 E G -3.0636
2 R G -2.9497
3 L G 0.0000
4 R G -1.0852
5 P G 0.0000
6 L G 0.0000
7 G G -1.0730
8 G G -1.1070
9 T G -0.5406
10 I G 0.0000
11 A G 0.0000
12 V G 0.0000
13 R G -0.7664
14 L G -0.6434
15 L G -0.9154
16 E G -1.8267
17 P G -1.0846
18 V G -0.9149
19 P G -1.1671
20 P G -1.2145
21 G G -1.5962
22 R G -2.4259
23 G G -2.2070
24 G G -1.6877
25 R G -1.6573
26 L G -1.2125
27 L G -0.7894
28 L G -0.9408
29 G G -1.7986
30 K G -2.1269
31 I G -1.5039
32 G G -1.9408
33 E G -2.9284
34 E G -2.4552
35 S G 0.0000
36 R G -1.3264
37 E G 0.0000
38 A G 0.0000
39 V G -0.7777
40 V G 0.0000
41 L G -0.0420
42 E G -0.5605
43 V G -0.5007
44 G G 0.0000
45 P G -0.6950
46 G G 0.0000
47 R G -2.2793
48 R G -2.0119
49 D G -2.4596
50 R G -3.1484
51 G G -2.9384
52 E G -3.1902
53 G G -1.9357
54 V G -1.0065
55 E G -1.5428
56 P G -0.8326
57 S G -1.1500
58 D G -1.3967
59 L G 0.0000
60 E G -2.3543
61 P G -1.3296
62 G G -1.3976
63 D G -1.7725
64 R G -1.8954
65 V G 0.0000
66 L G 0.0000
67 L G 0.0000
68 R G -1.2536
69 L G -1.4192
70 D G -1.7933
71 E G -2.6235
72 R G -1.9155
73 V G 0.0000
74 E G 0.0000
75 R G -0.8329
76 V G 0.0000
77 R G -1.8878
78 V G -2.0983
79 N G -2.5254
80 G G -1.9559
81 E G -2.2389
82 E G -1.6966
83 V G 0.0000
84 L G 0.0000
85 L G 0.0000
86 L G 0.0000
87 P G -0.6617
88 E G -0.7410
89 S G -0.5903
90 S G 0.0000
91 V G 0.0000
92 L G -0.1180
93 A G 0.0000
94 K G -1.2232
95 W G 0.0000
96 V G -1.8392
97 K G -2.6252
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Laboratory of Theory of Biopolymers 2018