| Chain sequence(s) |
B: LAALRAKMDGMMKALKLMEEMAKQAGVEETPELRKTRDRAKATIAKLRAA
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:55)
[INFO] Main: Simulation completed successfully. (00:01:55)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | L | B | 1.1590 | |
| 2 | A | B | 0.1899 | |
| 3 | A | B | -0.2645 | |
| 4 | L | B | -0.5401 | |
| 5 | R | B | -2.2258 | |
| 6 | A | B | -1.7447 | |
| 7 | K | B | -2.4612 | |
| 8 | M | B | -2.3904 | |
| 9 | D | B | -3.2391 | |
| 10 | G | B | -2.2447 | |
| 11 | M | B | -1.5185 | |
| 12 | M | B | -1.6086 | |
| 13 | K | B | -2.4315 | |
| 14 | A | B | -1.1926 | |
| 15 | L | B | 0.0000 | |
| 16 | K | B | -2.0009 | |
| 17 | L | B | -0.8010 | |
| 18 | M | B | -0.5787 | |
| 19 | E | B | -2.0079 | |
| 20 | E | B | -2.5682 | |
| 21 | M | B | -0.7442 | |
| 22 | A | B | -1.4420 | |
| 23 | K | B | -2.8223 | |
| 24 | Q | B | -2.0590 | |
| 25 | A | B | -1.1972 | |
| 26 | G | B | -1.4189 | |
| 27 | V | B | -0.6084 | |
| 28 | E | B | -2.0160 | |
| 29 | E | B | -2.2593 | |
| 30 | T | B | -1.7546 | |
| 31 | P | B | -2.2168 | |
| 32 | E | B | -3.0234 | |
| 33 | L | B | -2.5820 | |
| 34 | R | B | -3.7428 | |
| 35 | K | B | -4.1046 | |
| 36 | T | B | -3.1015 | |
| 37 | R | B | -3.4001 | |
| 38 | D | B | -4.2631 | |
| 39 | R | B | -3.7525 | |
| 40 | A | B | -2.5568 | |
| 41 | K | B | -2.8947 | |
| 42 | A | B | -2.3496 | |
| 43 | T | B | -1.9202 | |
| 44 | I | B | -1.6609 | |
| 45 | A | B | -1.7564 | |
| 46 | K | B | -2.2116 | |
| 47 | L | B | -1.5020 | |
| 48 | R | B | -2.5521 | |
| 49 | A | B | -1.3135 | |
| 50 | A | B | -0.8260 |