| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFSDIIKNGKVVVPKVSGYQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGSIGHPLFNKLGDTENPTAPVHEGADDRVAFSFDPKQTQLFIVGCEPPTGEHWDLAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYRRSGPEGHPLPDAPPPSPLYTKPPPSSPYAVRPSTDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLCVPLPNVYDPSCFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:05)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9441 | |
| 2 | L | A | 1.9659 | |
| 3 | P | A | 0.6571 | |
| 4 | P | A | 0.3677 | |
| 5 | T | A | 0.1206 | |
| 6 | T | A | 0.1414 | |
| 7 | P | A | 0.1840 | |
| 8 | V | A | 1.2332 | |
| 9 | A | A | 0.0868 | |
| 10 | K | A | -1.0165 | |
| 11 | V | A | -0.1655 | |
| 12 | Q | A | -1.4002 | |
| 13 | S | A | -1.5489 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.4003 | |
| 16 | E | A | -2.4285 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4622 | |
| 20 | P | A | 0.1297 | |
| 21 | T | A | 0.1793 | |
| 22 | S | A | -0.0962 | |
| 23 | L | A | 0.1152 | |
| 24 | F | A | -0.0302 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.2935 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.9018 | |
| 31 | R | A | -2.6876 | |
| 32 | L | A | -0.8067 | |
| 33 | L | A | 1.1552 | |
| 34 | T | A | 1.3596 | |
| 35 | V | A | 1.8063 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | 0.2698 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | 0.1894 | |
| 40 | S | A | 0.0870 | |
| 41 | D | A | 0.1558 | |
| 42 | I | A | 1.6378 | |
| 43 | I | A | 1.5735 | |
| 44 | K | A | -0.9986 | |
| 45 | N | A | -1.8761 | |
| 46 | G | A | -1.1476 | |
| 47 | K | A | -0.8610 | |
| 48 | V | A | 1.7621 | |
| 49 | V | A | 2.1683 | |
| 50 | V | A | 1.6108 | |
| 51 | P | A | 0.8801 | |
| 52 | K | A | 0.0151 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1437 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.3956 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2670 | |
| 70 | K | A | -1.7865 | |
| 71 | F | A | -0.6353 | |
| 72 | A | A | -0.5717 | |
| 73 | L | A | -0.8572 | |
| 74 | P | A | -1.2670 | |
| 75 | Q | A | -2.5023 | |
| 76 | K | A | -3.1050 | |
| 77 | D | A | -2.9886 | |
| 78 | F | A | -1.6515 | |
| 79 | Y | A | -1.8866 | |
| 80 | D | A | -2.6886 | |
| 81 | P | A | -2.3070 | |
| 82 | E | A | -3.0507 | |
| 83 | K | A | -3.3940 | |
| 84 | E | A | -2.4608 | |
| 85 | R | A | -1.2937 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6672 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9715 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3671 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.7006 | |
| 99 | G | A | -0.5398 | |
| 100 | P | A | -0.4078 | |
| 101 | L | A | 0.0375 | |
| 102 | G | A | -0.2034 | |
| 103 | K | A | -0.6136 | |
| 104 | G | A | -0.4911 | |
| 105 | S | A | -0.5429 | |
| 106 | I | A | 0.0000 | |
| 107 | G | A | 0.1097 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | 0.4161 | |
| 110 | L | A | 0.3161 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.1488 | |
| 113 | K | A | -0.5334 | |
| 114 | L | A | 0.0000 | |
| 115 | G | A | 0.0000 | |
| 116 | D | A | -1.2056 | |
| 117 | T | A | -0.8636 | |
| 118 | E | A | -1.8405 | |
| 119 | N | A | -2.0066 | |
| 120 | P | A | -1.3127 | |
| 121 | T | A | -0.6447 | |
| 122 | A | A | -0.2999 | |
| 123 | P | A | -0.1161 | |
| 124 | V | A | -0.2345 | |
| 125 | H | A | -1.2913 | |
| 126 | E | A | -2.3134 | |
| 127 | G | A | -2.1069 | |
| 128 | A | A | -1.5432 | |
| 129 | D | A | -2.4515 | |
| 130 | D | A | -2.0622 | |
| 131 | R | A | -1.0968 | |
| 132 | V | A | 0.2561 | |
| 133 | A | A | 0.4489 | |
| 134 | F | A | 0.2779 | |
| 135 | S | A | -0.1028 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.5078 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | 0.0000 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5612 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.1960 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.1754 | |
| 157 | D | A | 0.3529 | |
| 158 | L | A | 0.8203 | |
| 159 | A | A | 0.1924 | |
| 160 | E | A | -1.4467 | |
| 161 | P | A | -0.2056 | |
| 162 | C | A | 0.1925 | |
| 163 | P | A | -0.1673 | |
| 164 | G | A | -0.0766 | |
| 165 | L | A | 0.5995 | |
| 166 | P | A | -0.1185 | |
| 167 | P | A | -0.3421 | |
| 168 | G | A | -0.4508 | |
| 169 | A | A | -0.0262 | |
| 170 | C | A | 0.6618 | |
| 171 | P | A | 0.5435 | |
| 172 | P | A | 0.7832 | |
| 173 | I | A | 2.0581 | |
| 174 | Q | A | 0.8880 | |
| 175 | L | A | 1.5078 | |
| 176 | V | A | 0.8650 | |
| 177 | N | A | -0.2975 | |
| 178 | S | A | 0.0267 | |
| 179 | V | A | 0.4280 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3829 | |
| 182 | D | A | 0.0863 | |
| 183 | G | A | -0.1573 | |
| 184 | D | A | -0.5293 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1076 | |
| 190 | F | A | 0.0582 | |
| 191 | G | A | -0.1023 | |
| 192 | N | A | -0.2498 | |
| 193 | M | A | -0.1004 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.4041 | |
| 197 | E | A | -2.6205 | |
| 198 | L | A | -1.2243 | |
| 199 | Q | A | -2.5686 | |
| 200 | Q | A | -3.3291 | |
| 201 | D | A | -3.5890 | |
| 202 | R | A | -3.3460 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.4248 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3645 | |
| 211 | S | A | -1.7166 | |
| 212 | T | A | -1.4247 | |
| 213 | R | A | -2.0494 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1566 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.3777 | |
| 220 | L | A | 0.6085 | |
| 221 | K | A | -1.1092 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.8175 | |
| 224 | N | A | -1.4961 | |
| 225 | E | A | -1.2392 | |
| 226 | A | A | -0.6073 | |
| 227 | Y | A | -0.3757 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.6773 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | 0.0741 | |
| 234 | F | A | 0.2627 | |
| 235 | G | A | -0.8059 | |
| 236 | R | A | -2.5752 | |
| 237 | R | A | -2.8082 | |
| 238 | E | A | -2.0726 | |
| 239 | Q | A | -0.1548 | |
| 240 | V | A | 1.4220 | |
| 241 | Y | A | 1.1016 | |
| 242 | A | A | 0.2194 | |
| 243 | R | A | -0.9142 | |
| 244 | H | A | -0.9413 | |
| 245 | F | A | 0.0341 | |
| 246 | Y | A | 0.0000 | |
| 247 | R | A | 0.0000 | |
| 248 | R | A | -0.8247 | |
| 249 | S | A | -1.4959 | |
| 250 | G | A | -1.2120 | |
| 251 | P | A | -1.1693 | |
| 252 | E | A | -1.3589 | |
| 253 | G | A | -1.2697 | |
| 254 | H | A | -1.4450 | |
| 255 | P | A | -1.3310 | |
| 256 | L | A | -0.3393 | |
| 257 | P | A | -0.8870 | |
| 258 | D | A | -1.9578 | |
| 259 | A | A | 0.0000 | |
| 260 | P | A | -1.0614 | |
| 261 | P | A | -0.8891 | |
| 262 | P | A | -0.5128 | |
| 263 | S | A | -0.4701 | |
| 264 | P | A | 0.3800 | |
| 265 | L | A | 1.0912 | |
| 266 | Y | A | 0.1845 | |
| 267 | T | A | -0.8924 | |
| 268 | K | A | -1.9005 | |
| 269 | P | A | -0.7263 | |
| 270 | P | A | -0.7494 | |
| 271 | P | A | -0.3435 | |
| 272 | S | A | -0.1388 | |
| 273 | S | A | -0.0045 | |
| 274 | P | A | 0.3751 | |
| 275 | Y | A | 0.9490 | |
| 276 | A | A | 0.6341 | |
| 277 | V | A | 1.3735 | |
| 278 | R | A | 0.1649 | |
| 279 | P | A | -0.3800 | |
| 280 | S | A | 0.0000 | |
| 281 | T | A | -0.4682 | |
| 282 | D | A | -0.8566 | |
| 283 | Y | A | 0.8536 | |
| 284 | F | A | 0.6987 | |
| 285 | G | A | 0.2420 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.9278 | |
| 291 | L | A | 1.6282 | |
| 292 | V | A | 0.6436 | |
| 293 | S | A | -0.1609 | |
| 294 | S | A | -0.9614 | |
| 295 | D | A | -1.8421 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.1000 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6538 | |
| 301 | R | A | -1.8718 | |
| 302 | P | A | -0.9799 | |
| 303 | F | A | -0.1935 | |
| 304 | W | A | -0.5685 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0861 | |
| 307 | R | A | -2.8363 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.2705 | |
| 310 | G | A | -1.2340 | |
| 311 | N | A | -1.2769 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.8285 | |
| 319 | N | A | -0.9392 | |
| 320 | E | A | -1.0384 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3373 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.1026 | |
| 333 | N | A | 0.5059 | |
| 334 | F | A | 1.6863 | |
| 335 | T | A | 0.8323 | |
| 336 | I | A | 0.4109 | |
| 337 | S | A | -0.9844 | |
| 338 | Q | A | -1.7640 | |
| 339 | Q | A | -0.8264 | |
| 340 | L | A | 1.1373 | |
| 341 | C | A | 1.4838 | |
| 342 | V | A | 2.2937 | |
| 343 | P | A | 1.3391 | |
| 344 | L | A | 1.8482 | |
| 345 | P | A | 0.9223 | |
| 346 | N | A | 0.0106 | |
| 347 | V | A | 1.7195 | |
| 348 | Y | A | 1.6016 | |
| 349 | D | A | 0.2185 | |
| 350 | P | A | -0.4113 | |
| 351 | S | A | -0.3601 | |
| 352 | C | A | 0.0000 | |
| 353 | F | A | -0.7606 | |
| 354 | K | A | -1.8707 | |
| 355 | N | A | -1.8051 | |
| 356 | Y | A | -0.1192 | |
| 357 | L | A | 0.6134 | |
| 358 | R | A | 0.9304 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.3703 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0852 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -2.0569 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6897 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.3037 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3088 | |
| 376 | L | A | -1.7033 | |
| 377 | D | A | -1.9807 | |
| 378 | P | A | -1.0327 | |
| 379 | G | A | -1.0118 | |
| 380 | V | A | -0.9299 | |
| 381 | L | A | -0.5266 | |
| 382 | A | A | -0.6541 | |
| 383 | H | A | -0.8047 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.4072 | |
| 386 | T | A | -0.5494 | |
| 387 | M | A | -0.2987 | |
| 388 | N | A | -0.8627 | |
| 389 | P | A | -1.2448 | |
| 390 | T | A | -1.4549 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.4592 | |
| 393 | E | A | -2.8005 | |
| 394 | N | A | -2.4223 | |
| 395 | W | A | -1.4154 | |
| 396 | N | A | -1.1877 | |
| 397 | L | A | -0.2306 | |
| 398 | G | A | 0.5015 | |
| 399 | F | A | 2.4030 | |
| 400 | V | A | 1.8206 | |
| 401 | P | A | 0.0410 | |
| 402 | P | A | -1.8727 | |
| 403 | K | A | -3.3217 | |
| 404 | E | A | -3.7835 | |
| 405 | R | A | -3.9331 | |
| 406 | E | A | -3.8000 | |
| 407 | D | A | -2.8767 | |
| 408 | P | A | -1.7655 | |
| 409 | Y | A | -0.9906 | |
| 410 | K | A | -2.1224 | |
| 411 | G | A | -0.6406 | |
| 412 | L | A | 0.6681 | |
| 413 | I | A | 1.5894 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.3763 | |
| 416 | E | A | -1.6551 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.9444 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -2.0614 | |
| 421 | E | A | -2.7953 | |
| 422 | R | A | -2.6571 | |
| 423 | F | A | -1.2908 | |
| 424 | S | A | -1.4718 | |
| 425 | Q | A | -1.8729 | |
| 426 | D | A | -2.8908 | |
| 427 | L | A | -1.9749 | |
| 428 | D | A | -2.7583 | |
| 429 | Q | A | -2.6103 | |
| 430 | F | A | -1.4144 | |
| 431 | A | A | -0.8876 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.5595 | |
| 435 | K | A | -0.6882 | |
| 436 | F | A | 0.1479 | |
| 437 | L | A | 1.0309 | |
| 438 | Y | A | 0.8311 | |
| 439 | Q | A | -0.2703 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine