Project name: 614e6e1591ced81

Status: done

Started: 2026-05-21 15:41:26
Settings
Chain sequence(s) A: KGHKGHG
C: KGHKGHG
B: KGHKGHG
D: KGHKGHG
input PDB
Selected Chain(s) A,C,B,D
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:41)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:42)
Show buried residues

Minimal score value
-3.5619
Maximal score value
-1.3592
Average score
-2.7294
Total score value
-76.422

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 K A -2.9432
2 G A -2.6537
3 H A -3.0629
4 K A -3.2670
5 G A -2.5933
6 H A -2.2770
7 G A -1.3592
1 K B -3.3472
2 G B -3.1415
3 H B -3.1115
4 K B -3.1396
5 G B -2.6433
6 H B -2.3255
7 G B -1.6033
1 K C -3.5619
2 G C -3.1500
3 H C -3.1623
4 K C -3.2741
5 G C -2.8179
6 H C -2.6674
7 G C -1.7064
1 K D -2.8071
2 G D -2.9522
3 H D -3.1484
4 K D -3.3338
5 G D -2.5137
6 H D -2.3624
7 G D -1.4962
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Laboratory of Theory of Biopolymers 2018