Project name: 61546050a6a4540

Status: done

Started: 2025-06-03 04:55:10
Settings
Chain sequence(s) H: EVQLVESGGGLVQPGGSLRLSCAASGFTFSVYYMNWVRQAPGKGLEWVSDINNEGGTTYYADSVKGRFTISRDNSKNSLYLQMNSLRAEDTAVYYCARDAGYSNHVPIFDSWGQGTLVTVSS
L: QAVVTQEPSLTVSPGGTVTLTCGLKSGSVTSDNFPTWYQQTPGQAPRLLIYNTNTRHSGVPDRFSGSILGNKAALTITGAQADDEAEYFCALFISNPSVEFGGGTQLTVL
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:59)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:00)
Show buried residues

Minimal score value
-2.5617
Maximal score value
1.529
Average score
-0.514
Total score value
-119.2479

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 E H -1.7573
2 V H -0.6433
3 Q H -0.6373
4 L H 0.0000
5 V H 1.1839
6 E H 0.4485
7 S H -0.1270
8 G H -0.5816
9 G H 0.2255
11 G H 0.7258
12 L H 1.4294
13 V H 0.0403
14 Q H -1.3001
15 P H -1.5806
16 G H -1.4842
17 G H -1.0527
18 S H -1.1902
19 L H -0.6976
20 R H -1.5424
21 L H 0.0000
22 S H -0.2608
23 C H 0.0000
24 A H -0.0972
25 A H 0.0000
26 S H -0.5336
27 G H -0.8815
28 F H -0.0796
29 T H 0.3473
30 F H 0.0000
35 S H -0.2664
36 V H 1.3448
37 Y H 0.7664
38 Y H -0.0117
39 M H 0.0000
40 N H 0.0000
41 W H 0.0000
42 V H 0.0000
43 R H 0.0000
44 Q H -0.6215
45 A H -1.0210
46 P H -0.8251
47 G H -1.4487
48 K H -2.2510
49 G H -1.4555
50 L H 0.0000
51 E H -0.9396
52 W H 0.0000
53 V H 0.0000
54 S H 0.0000
55 D H 0.0000
56 I H 0.0000
57 N H -0.7938
58 N H -0.7927
59 E H -2.0869
62 G H -1.5973
63 G H -1.2306
64 T H -0.6176
65 T H -0.0791
66 Y H -0.2192
67 Y H -0.8276
68 A H -1.3703
69 D H -2.5617
70 S H -1.7288
71 V H 0.0000
72 K H -2.5230
74 G H -1.7808
75 R H -1.7967
76 F H 0.0000
77 T H -0.8923
78 I H 0.0000
79 S H -0.7383
80 R H -1.3499
81 D H -1.7561
82 N H -1.8351
83 S H -1.5983
84 K H -2.4652
85 N H -1.9689
86 S H -1.0997
87 L H 0.0000
88 Y H -0.4697
89 L H 0.0000
90 Q H -1.3549
91 M H 0.0000
92 N H -1.7838
93 S H -1.4121
94 L H 0.0000
95 R H -2.1438
96 A H -1.5949
97 E H -2.1641
98 D H 0.0000
99 T H -0.3239
100 A H 0.0000
101 V H 0.7158
102 Y H 0.0000
103 Y H 0.0000
104 C H 0.0000
105 A H 0.0000
106 R H 0.0000
107 D H 0.0000
108 A H 0.1448
109 G H 0.2523
110 Y H 0.6813
111 S H -0.5475
111A N H -1.6508
112A H H -1.5196
112 V H 0.0000
113 P H -0.2891
114 I H 0.0000
115 F H 0.0000
116 D H -0.4701
117 S H -0.2636
118 W H -0.3662
119 G H 0.0000
120 Q H -1.0696
121 G H -0.1035
122 T H 0.5541
123 L H 1.5290
124 V H 0.0000
125 T H 0.3920
126 V H 0.0000
127 S H -0.7161
128 S H -0.6882
1 Q L -1.1596
2 A L -0.2631
3 V L 0.7880
4 V L 0.0000
5 T L -0.2583
6 Q L 0.0000
7 E L -0.7970
8 P L -0.8374
9 S L -0.7062
11 L L -0.0801
12 T L 0.2826
13 V L 0.3174
14 S L 0.1368
15 P L -0.4385
16 G L -0.9074
17 G L -0.5981
18 T L -0.2787
19 V L 0.0716
20 T L 0.0209
21 L L 0.0000
22 T L -0.0252
23 C L 0.0000
24 G L 0.0000
25 L L -0.6944
26 K L -1.4363
27 S L -1.0495
28 G L -1.4045
29 S L -1.2686
30 V L 0.0000
31 T L -0.9141
35 S L -1.1340
36 D L -1.7904
37 N L -0.7382
38 F L -0.6083
39 P L 0.0000
40 T L 0.0000
41 W L 0.0000
42 Y L 0.0000
43 Q L 0.0000
44 Q L -1.1805
45 T L -1.3458
46 P L -1.0326
47 G L -1.3365
48 Q L -1.9479
49 A L -1.3838
50 P L 0.0000
51 R L -1.2888
52 L L 0.0000
53 L L 0.0000
54 I L 0.0000
55 Y L -0.5692
56 N L -1.1102
57 T L -0.9951
65 N L -1.5578
66 T L -1.2351
67 R L -1.7403
68 H L -1.1389
69 S L -0.7402
70 G L -0.9127
71 V L -1.0227
72 P L -1.2415
74 D L -2.1223
75 R L -1.2263
76 F L 0.0000
77 S L -1.1062
78 G L 0.0000
79 S L -0.0989
80 I L 0.4903
83 L L 1.0192
84 G L -0.4082
85 N L -1.4091
86 K L -0.8012
87 A L 0.0000
88 A L 0.0000
89 L L 0.0000
90 T L -0.0979
91 I L 0.0000
92 T L -0.7258
93 G L -0.9233
94 A L 0.0000
95 Q L -1.3552
96 A L -0.9398
97 D L -1.6545
98 D L 0.0000
99 E L -1.1144
100 A L 0.0000
101 E L -1.0887
102 Y L 0.0000
103 F L 0.0000
104 C L 0.0000
105 A L 0.0000
106 L L 0.0000
107 F L -0.1239
108 I L -0.0608
109 S L -0.5710
113 N L -0.8874
114 P L -0.4090
115 S L -0.5216
116 V L 0.0000
117 E L -0.0192
118 F L 0.0000
119 G L 0.0000
120 G L -0.8798
121 G L 0.0000
122 T L 0.0000
123 Q L -1.2176
124 L L 0.0000
125 T L 0.0295
126 V L 0.2794
127 L L 1.3937
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Laboratory of Theory of Biopolymers 2018