| Chain sequence(s) |
A: ETCVGNKCYTPGCTCTWPVCYRNGHPICG
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:23)
[INFO] Main: Simulation completed successfully. (00:00:23)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | A | 0.1355 | |
| 2 | T | A | 0.2572 | |
| 3 | C | A | 0.0000 | |
| 4 | V | A | 1.1094 | |
| 5 | G | A | -0.5690 | |
| 6 | N | A | -1.4266 | |
| 7 | K | A | -1.5390 | |
| 8 | C | A | -0.2630 | |
| 9 | Y | A | 0.6977 | |
| 10 | T | A | -0.0149 | |
| 11 | P | A | -0.2228 | |
| 12 | G | A | -0.7321 | |
| 13 | C | A | -0.6134 | |
| 14 | T | A | -0.5614 | |
| 15 | C | A | 0.0693 | |
| 16 | T | A | 0.4800 | |
| 17 | W | A | 1.1918 | |
| 18 | P | A | 0.9091 | |
| 19 | V | A | 0.8976 | |
| 20 | C | A | 0.0000 | |
| 21 | Y | A | -0.3422 | |
| 22 | R | A | -1.5475 | |
| 23 | N | A | -1.9828 | |
| 24 | G | A | -1.5190 | |
| 25 | H | A | -1.1633 | |
| 26 | P | A | -0.1709 | |
| 27 | I | A | 1.0449 | |
| 28 | C | A | 0.0000 | |
| 29 | G | A | 0.1040 |