Project name: query_structure

Status: done

Started: 2026-03-16 23:12:08
Settings
Chain sequence(s) A: ETCVGNKCYTPGCTCTWPVCYRNGHPICG
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:23)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:23)
Show buried residues

Minimal score value
-1.9828
Maximal score value
1.1918
Average score
-0.199
Total score value
-5.7714

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 E A 0.1355
2 T A 0.2572
3 C A 0.0000
4 V A 1.1094
5 G A -0.5690
6 N A -1.4266
7 K A -1.5390
8 C A -0.2630
9 Y A 0.6977
10 T A -0.0149
11 P A -0.2228
12 G A -0.7321
13 C A -0.6134
14 T A -0.5614
15 C A 0.0693
16 T A 0.4800
17 W A 1.1918
18 P A 0.9091
19 V A 0.8976
20 C A 0.0000
21 Y A -0.3422
22 R A -1.5475
23 N A -1.9828
24 G A -1.5190
25 H A -1.1633
26 P A -0.1709
27 I A 1.0449
28 C A 0.0000
29 G A 0.1040
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Laboratory of Theory of Biopolymers 2018