| Chain sequence(s) |
A: KGHKGHK
C: KGHKGHK B: KGHKGHK E: KGHKGHK D: KGHKGHK G: KGHKGHK F: KGHKGHK I: KGHKGHK H: KGHKGHK K: KGHKGHK J: KGHKGHK L: KGHKGHK input PDB |
| Selected Chain(s) | A,C,B,E,D,G,F,I,H,K,J,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:05:28)
[INFO] Main: Simulation completed successfully. (00:05:30)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | K | A | -3.6951 | |
| 2 | G | A | -3.6678 | |
| 3 | H | A | -3.8412 | |
| 4 | K | A | -4.6582 | |
| 5 | G | A | -4.0219 | |
| 6 | H | A | -3.3582 | |
| 7 | K | A | -3.0731 | |
| 1 | K | B | -3.2291 | |
| 2 | G | B | 0.0000 | |
| 3 | H | B | -3.6236 | |
| 4 | K | B | -4.5889 | |
| 5 | G | B | 0.0000 | |
| 6 | H | B | -3.2650 | |
| 7 | K | B | -3.9782 | |
| 1 | K | C | -2.7406 | |
| 2 | G | C | -3.1764 | |
| 3 | H | C | -3.1708 | |
| 4 | K | C | -3.8503 | |
| 5 | G | C | -2.9705 | |
| 6 | H | C | -2.6054 | |
| 7 | K | C | -2.8041 | |
| 1 | K | D | -3.1777 | |
| 2 | G | D | -2.8830 | |
| 3 | H | D | -3.3981 | |
| 4 | K | D | -4.2756 | |
| 5 | G | D | -3.3291 | |
| 6 | H | D | -2.9044 | |
| 7 | K | D | -2.6877 | |
| 1 | K | E | -2.8560 | |
| 2 | G | E | -2.4799 | |
| 3 | H | E | -3.4521 | |
| 4 | K | E | -4.0469 | |
| 5 | G | E | -3.4249 | |
| 6 | H | E | -3.3291 | |
| 7 | K | E | -2.6715 | |
| 1 | K | F | -2.9835 | |
| 2 | G | F | -2.8477 | |
| 3 | H | F | -3.3771 | |
| 4 | K | F | -3.7955 | |
| 5 | G | F | -3.0367 | |
| 6 | H | F | -3.3091 | |
| 7 | K | F | -3.0954 | |
| 1 | K | G | -4.3206 | |
| 2 | G | G | -3.7077 | |
| 3 | H | G | -3.3919 | |
| 4 | K | G | -4.2287 | |
| 5 | G | G | -3.4716 | |
| 6 | H | G | -3.7894 | |
| 7 | K | G | -3.8551 | |
| 1 | K | H | -3.1304 | |
| 2 | G | H | -2.5058 | |
| 3 | H | H | -3.3952 | |
| 4 | K | H | -3.8404 | |
| 5 | G | H | -3.4780 | |
| 6 | H | H | -3.6883 | |
| 7 | K | H | -4.2341 | |
| 1 | K | I | -3.3447 | |
| 2 | G | I | -3.1778 | |
| 3 | H | I | -3.1116 | |
| 4 | K | I | -3.9986 | |
| 5 | G | I | -3.6349 | |
| 6 | H | I | -3.3375 | |
| 7 | K | I | -2.9027 | |
| 1 | K | J | -3.3239 | |
| 2 | G | J | -3.3961 | |
| 3 | H | J | -2.9898 | |
| 4 | K | J | -4.1124 | |
| 5 | G | J | -4.2141 | |
| 6 | H | J | -5.3399 | |
| 7 | K | J | -4.5702 | |
| 1 | K | K | -3.3610 | |
| 2 | G | K | -3.9849 | |
| 3 | H | K | -4.1863 | |
| 4 | K | K | -5.3487 | |
| 5 | G | K | 0.0000 | |
| 6 | H | K | -4.9548 | |
| 7 | K | K | -5.1939 | |
| 1 | K | L | -5.0462 | |
| 2 | G | L | 0.0000 | |
| 3 | H | L | -4.5145 | |
| 4 | K | L | -5.3430 | |
| 5 | G | L | -3.5716 | |
| 6 | H | L | -3.2633 | |
| 7 | K | L | -2.8314 |