Project name: 10_i14e7_x11e6_x4e7_i20e6

Status: done

Started: 2025-08-11 19:05:04
Settings
Chain sequence(s) A: AAYRAHYNIVTFAAYTLQDIVLHLAAYLLMGTLGIVAAYLPARRAEPQAAYAEKLRHLNEKRRFHNGPGPGLDKKQRFHNIRGRWTGPGPGNPAEKLRHLNEKRRFGPGPGSKISEYRHYCYSLYGGPGPGLLCHEQLSDSEEENDGPGPGQSTHVDIRTLEDLLMGPGPGTPTLHEYMLDLQPETGPGPGLQDIVLHLEPQNEIPGPGPGVYDFAFRDLAAYRFHNIAGHYAAYCYSLYGTTLAAYKTVLELTEVAAY
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:02:49)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:51)
Show buried residues

Minimal score value
-4.558
Maximal score value
3.7525
Average score
-0.2296
Total score value
-59.469

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 A A -0.2673
2 A A -0.0069
3 Y A 0.2002
4 R A -1.0159
5 A A -0.0326
6 H A 0.5648
7 Y A 1.6325
8 N A 1.3060
9 I A 2.9574
10 V A 3.3741
11 T A 2.8158
12 F A 3.6099
13 A A 2.6249
14 A A 1.9693
15 Y A 2.2577
16 T A 1.7235
17 L A 2.3821
18 Q A 1.0773
19 D A 0.4013
20 I A 2.3943
21 V A 3.2211
22 L A 2.5931
23 H A 1.7730
24 L A 3.3519
25 A A 2.9762
26 A A 2.8865
27 Y A 3.6437
28 L A 3.7189
29 L A 3.7525
30 M A 3.5231
31 G A 2.6235
32 T A 2.9043
33 L A 3.6335
34 G A 2.5272
35 I A 3.5965
36 V A 3.4653
37 A A 2.2044
38 A A 1.8704
39 Y A 1.9731
40 L A 0.9471
41 P A -0.7278
42 A A -1.2569
43 R A -2.9052
44 R A -3.2773
45 A A -2.6478
46 E A -3.1952
47 P A -2.2630
48 Q A -2.3693
49 A A -1.5573
50 A A -1.1045
51 Y A -0.6380
52 A A -1.2931
53 E A -2.7827
54 K A -2.5280
55 L A -1.7398
56 R A -3.8166
57 H A -3.7953
58 L A -3.0346
59 N A -3.8447
60 E A -4.2306
61 K A -4.1368
62 R A -4.5580
63 R A -3.8112
64 F A -1.6248
65 H A -2.6598
66 N A -2.7305
67 G A -1.6115
68 P A -0.8121
69 G A -0.8105
70 P A -0.6905
71 G A -0.6760
72 L A -0.4026
73 D A -2.9662
74 K A -3.5039
75 K A -3.6603
76 Q A -3.4052
77 R A -2.9670
78 F A -0.4235
79 H A -1.3964
80 N A -1.1441
81 I A 0.2288
82 R A -1.6758
83 G A -1.6147
84 R A -1.6699
85 W A -0.2359
86 T A -0.2828
87 G A -0.6982
88 P A -0.7408
89 G A -1.0779
90 P A -1.1492
91 G A -1.8351
92 N A -2.3625
93 P A -1.6948
94 A A -1.8139
95 E A -3.1930
96 K A -2.8377
97 L A -1.1130
98 R A -3.1209
99 H A -3.1093
100 L A -1.8425
101 N A -3.1669
102 E A -3.8855
103 K A -3.9088
104 R A -3.7085
105 R A -3.0415
106 F A -0.4239
107 G A -0.8184
108 P A -0.6147
109 G A -0.7750
110 P A -1.1059
111 G A -1.0502
112 S A -0.8880
113 K A -1.2523
114 I A 0.6363
115 S A -0.4868
116 E A -1.5525
117 Y A -0.3688
118 R A -1.7686
119 H A -0.7642
120 Y A 1.1818
121 C A 1.6670
122 Y A 2.3602
123 S A 1.8076
124 L A 2.3631
125 Y A 1.8360
126 G A 0.1748
127 G A -0.4996
128 P A -0.9123
129 G A -0.8053
130 P A -0.2579
131 G A 0.5168
132 L A 2.0354
133 L A 2.0112
134 C A 0.7115
135 H A -1.0415
136 E A -2.0959
137 Q A -1.7878
138 L A -0.2660
139 S A -1.1671
140 D A -2.4446
141 S A -2.5234
142 E A -4.0166
143 E A -4.3622
144 E A -4.3236
145 N A -3.8740
146 D A -3.3704
147 G A -2.0445
148 P A -1.2488
149 G A -1.2756
150 P A -1.1431
151 G A -1.3469
152 Q A -1.7794
153 S A -1.0344
154 T A -0.6542
155 H A -0.3754
156 V A 1.2229
157 D A 0.0352
158 I A 0.8258
159 R A -1.3224
160 T A -0.2034
161 L A 1.0108
162 E A -0.9722
163 D A -0.9442
164 L A 1.2361
165 L A 1.8148
166 M A 1.1222
167 G A 0.0093
168 P A -0.1956
169 G A -0.8501
170 P A -0.8477
171 G A -0.8308
172 T A -0.0273
173 P A -0.3834
174 T A -0.0668
175 L A 0.9996
176 H A -0.2042
177 E A -0.8134
178 Y A 1.2883
179 M A 1.6183
180 L A 1.1340
181 D A -0.3476
182 L A 0.6831
183 Q A -1.1406
184 P A -1.5971
185 E A -2.1984
186 T A -1.5116
187 G A -1.1673
188 P A -0.8346
189 G A -0.7320
190 P A -0.5672
191 G A -0.4547
192 L A 0.3882
193 Q A -0.7209
194 D A -0.3266
195 I A 2.1706
196 V A 2.7454
197 L A 2.4527
198 H A 0.7137
199 L A 0.5783
200 E A -1.7215
201 P A -1.9485
202 Q A -2.3249
203 N A -2.5505
204 E A -1.8734
205 I A 0.3994
206 P A -0.0704
207 G A -0.5787
208 P A -0.2764
209 G A -0.6284
210 P A -0.4813
211 G A 0.0049
212 V A 1.4696
213 Y A 1.5184
214 D A -0.0778
215 F A 1.5109
216 A A 1.2611
217 F A 1.5687
218 R A -0.7687
219 D A -1.0325
220 L A 1.1824
221 A A 0.2775
222 A A 0.0708
223 Y A 0.4754
224 R A -0.6983
225 F A 0.6301
226 H A -0.7405
227 N A -0.7782
228 I A 1.2068
229 A A 0.6028
230 G A -0.2474
231 H A 0.0668
232 Y A 1.6906
233 A A 1.2686
234 A A 1.2417
235 Y A 2.1622
236 C A 2.0839
237 Y A 2.5544
238 S A 1.5719
239 L A 2.2835
240 Y A 2.4036
241 G A 1.7073
242 T A 1.1755
243 T A 1.3855
244 L A 2.2318
245 A A 1.0310
246 A A 1.2688
247 Y A 1.7890
248 K A 0.0076
249 T A 0.6769
250 V A 1.9293
251 L A 0.7206
252 E A -0.6194
253 L A 1.4383
254 T A 0.5386
255 E A -0.3836
256 V A 1.4677
257 A A 0.9532
258 A A 0.8393
259 Y A 1.4891
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Laboratory of Theory of Biopolymers 2018