| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFKDIVKNGKVVVPKVSGYQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGTVGHPLFNKLGDTENPTAPVHPGADDRVAFSFDPKQTQLFIVGCEPPTGEHWDIAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFHVRNGPDGHPLPAAPPPSKLYTPPPASSPYAVPPPTDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLCTPAENVYDPECFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:04)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9515 | |
| 2 | L | A | 1.9788 | |
| 3 | P | A | 0.6606 | |
| 4 | P | A | 0.3447 | |
| 5 | T | A | 0.0997 | |
| 6 | T | A | 0.1328 | |
| 7 | P | A | 0.1481 | |
| 8 | V | A | 1.2104 | |
| 9 | A | A | 0.0156 | |
| 10 | K | A | -1.1633 | |
| 11 | V | A | -0.4248 | |
| 12 | Q | A | -1.5447 | |
| 13 | S | A | -1.6140 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.4179 | |
| 16 | E | A | -2.4389 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4574 | |
| 20 | P | A | 0.1086 | |
| 21 | T | A | 0.1161 | |
| 22 | S | A | -0.1690 | |
| 23 | L | A | 0.0000 | |
| 24 | F | A | -0.0904 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.1391 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.6275 | |
| 31 | R | A | -2.5574 | |
| 32 | L | A | -0.7256 | |
| 33 | L | A | 1.2419 | |
| 34 | T | A | 1.6437 | |
| 35 | V | A | 2.0015 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.2266 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.6172 | |
| 40 | K | A | -1.6373 | |
| 41 | D | A | -0.9273 | |
| 42 | I | A | 0.8137 | |
| 43 | V | A | 1.0089 | |
| 44 | K | A | -1.1923 | |
| 45 | N | A | -1.9291 | |
| 46 | G | A | -1.2325 | |
| 47 | K | A | -0.9420 | |
| 48 | V | A | 1.4996 | |
| 49 | V | A | 2.0584 | |
| 50 | V | A | 1.2890 | |
| 51 | P | A | 0.4819 | |
| 52 | K | A | -0.6214 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.0980 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.4646 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2674 | |
| 70 | K | A | -1.8143 | |
| 71 | F | A | -0.6698 | |
| 72 | A | A | -0.5790 | |
| 73 | L | A | -0.8694 | |
| 74 | P | A | -1.2630 | |
| 75 | Q | A | -2.4760 | |
| 76 | K | A | -3.0938 | |
| 77 | D | A | -2.9876 | |
| 78 | F | A | -1.6425 | |
| 79 | Y | A | -1.9100 | |
| 80 | D | A | -2.7436 | |
| 81 | P | A | -2.3396 | |
| 82 | E | A | -3.0645 | |
| 83 | K | A | -3.4372 | |
| 84 | E | A | -2.4962 | |
| 85 | R | A | -1.3057 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6161 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9713 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3169 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.6768 | |
| 99 | G | A | -0.5356 | |
| 100 | P | A | -0.4190 | |
| 101 | L | A | 0.0125 | |
| 102 | G | A | -0.2583 | |
| 103 | K | A | -0.7173 | |
| 104 | G | A | 0.0000 | |
| 105 | T | A | -0.4546 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | 0.1553 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | 0.4161 | |
| 110 | L | A | 0.2818 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.2063 | |
| 113 | K | A | -0.5343 | |
| 114 | L | A | -1.0178 | |
| 115 | G | A | -0.7925 | |
| 116 | D | A | -1.3617 | |
| 117 | T | A | -1.1825 | |
| 118 | E | A | -2.6053 | |
| 119 | N | A | -2.3601 | |
| 120 | P | A | -1.5052 | |
| 121 | T | A | -0.7580 | |
| 122 | A | A | -0.3721 | |
| 123 | P | A | -0.0708 | |
| 124 | V | A | -0.1694 | |
| 125 | H | A | -0.7737 | |
| 126 | P | A | -1.3186 | |
| 127 | G | A | -1.5057 | |
| 128 | A | A | -1.3096 | |
| 129 | D | A | -2.3199 | |
| 130 | D | A | -1.9068 | |
| 131 | R | A | -1.2099 | |
| 132 | V | A | 0.2055 | |
| 133 | A | A | 0.4406 | |
| 134 | F | A | 0.2919 | |
| 135 | S | A | -0.0620 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.7027 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | -0.2167 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5712 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2546 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.0991 | |
| 157 | D | A | 0.3471 | |
| 158 | I | A | 0.8463 | |
| 159 | A | A | 0.1125 | |
| 160 | E | A | -1.4767 | |
| 161 | P | A | -0.2400 | |
| 162 | C | A | 0.1784 | |
| 163 | P | A | -0.1729 | |
| 164 | G | A | -0.0773 | |
| 165 | L | A | 0.5860 | |
| 166 | P | A | -0.1112 | |
| 167 | P | A | -0.3393 | |
| 168 | G | A | -0.4135 | |
| 169 | A | A | -0.0074 | |
| 170 | C | A | 0.7611 | |
| 171 | P | A | 0.5514 | |
| 172 | P | A | 0.7785 | |
| 173 | I | A | 2.0234 | |
| 174 | Q | A | 0.8189 | |
| 175 | L | A | 1.4216 | |
| 176 | V | A | 0.8097 | |
| 177 | N | A | -0.3427 | |
| 178 | S | A | -0.0081 | |
| 179 | V | A | 0.3666 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3642 | |
| 182 | D | A | 0.0843 | |
| 183 | G | A | -0.1581 | |
| 184 | D | A | -0.5535 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1378 | |
| 190 | F | A | 0.0575 | |
| 191 | G | A | -0.1047 | |
| 192 | N | A | -0.2739 | |
| 193 | M | A | -0.1390 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.3858 | |
| 197 | E | A | -2.5818 | |
| 198 | L | A | -1.1991 | |
| 199 | Q | A | -2.5328 | |
| 200 | Q | A | -3.3353 | |
| 201 | D | A | -3.6034 | |
| 202 | R | A | -3.3473 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.1976 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3719 | |
| 211 | S | A | -1.8861 | |
| 212 | T | A | -1.4436 | |
| 213 | R | A | -2.0984 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1661 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.2661 | |
| 220 | L | A | 0.4569 | |
| 221 | K | A | -1.3978 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.9877 | |
| 224 | N | A | -1.6016 | |
| 225 | E | A | -1.3398 | |
| 226 | A | A | -0.6804 | |
| 227 | Y | A | -0.4544 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.7214 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | -0.1327 | |
| 234 | F | A | 0.0371 | |
| 235 | G | A | -0.9225 | |
| 236 | R | A | -2.6859 | |
| 237 | R | A | -2.9797 | |
| 238 | E | A | -2.1634 | |
| 239 | Q | A | -0.1854 | |
| 240 | V | A | 1.5246 | |
| 241 | Y | A | 1.2221 | |
| 242 | A | A | 0.1445 | |
| 243 | R | A | -1.3595 | |
| 244 | H | A | -1.2509 | |
| 245 | F | A | -0.2495 | |
| 246 | H | A | 0.0000 | |
| 247 | V | A | 0.0000 | |
| 248 | R | A | -0.8426 | |
| 249 | N | A | -1.4132 | |
| 250 | G | A | -1.1424 | |
| 251 | P | A | -1.0993 | |
| 252 | D | A | -1.4353 | |
| 253 | G | A | -1.2990 | |
| 254 | H | A | -1.4533 | |
| 255 | P | A | -0.9561 | |
| 256 | L | A | 0.2723 | |
| 257 | P | A | -0.0985 | |
| 258 | A | A | -0.0217 | |
| 259 | A | A | -0.2096 | |
| 260 | P | A | -0.6693 | |
| 261 | P | A | -0.7958 | |
| 262 | P | A | -0.7188 | |
| 263 | S | A | -0.6181 | |
| 264 | K | A | -1.0390 | |
| 265 | L | A | 0.8676 | |
| 266 | Y | A | 0.5370 | |
| 267 | T | A | -0.1041 | |
| 268 | P | A | 0.1885 | |
| 269 | P | A | 0.1225 | |
| 270 | P | A | -0.2883 | |
| 271 | A | A | 0.1347 | |
| 272 | S | A | -0.2166 | |
| 273 | S | A | 0.2090 | |
| 274 | P | A | 0.3047 | |
| 275 | Y | A | 1.1250 | |
| 276 | A | A | 1.0463 | |
| 277 | V | A | 1.8146 | |
| 278 | P | A | 0.9401 | |
| 279 | P | A | 0.0553 | |
| 280 | P | A | -0.4768 | |
| 281 | T | A | -0.4681 | |
| 282 | D | A | -0.8716 | |
| 283 | Y | A | 0.8585 | |
| 284 | F | A | 0.7169 | |
| 285 | G | A | 0.1101 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.8999 | |
| 291 | L | A | 1.5994 | |
| 292 | V | A | 0.5988 | |
| 293 | S | A | -0.1637 | |
| 294 | S | A | -0.9693 | |
| 295 | D | A | -1.8448 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.1349 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6295 | |
| 301 | R | A | -1.8841 | |
| 302 | P | A | -0.9668 | |
| 303 | F | A | -0.1826 | |
| 304 | W | A | -0.5165 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0766 | |
| 307 | R | A | -2.9204 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.6539 | |
| 310 | G | A | -1.4217 | |
| 311 | N | A | -1.4016 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.8960 | |
| 319 | N | A | -0.8795 | |
| 320 | E | A | -1.0380 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3587 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.1669 | |
| 333 | N | A | 0.4052 | |
| 334 | F | A | 1.4527 | |
| 335 | T | A | 0.7278 | |
| 336 | I | A | 0.3792 | |
| 337 | S | A | -0.9866 | |
| 338 | Q | A | -1.7321 | |
| 339 | Q | A | -1.4972 | |
| 340 | L | A | 0.4176 | |
| 341 | C | A | 0.3372 | |
| 342 | T | A | 0.2935 | |
| 343 | P | A | -0.1582 | |
| 344 | A | A | -0.4038 | |
| 345 | E | A | -1.6833 | |
| 346 | N | A | -1.0462 | |
| 347 | V | A | 1.0364 | |
| 348 | Y | A | 1.0722 | |
| 349 | D | A | -0.2053 | |
| 350 | P | A | -1.0880 | |
| 351 | E | A | -1.8485 | |
| 352 | C | A | 0.0000 | |
| 353 | F | A | -1.2490 | |
| 354 | K | A | -2.0711 | |
| 355 | N | A | -1.7575 | |
| 356 | Y | A | -0.1048 | |
| 357 | L | A | 0.5631 | |
| 358 | R | A | 0.9045 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.4710 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0148 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -1.9015 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6576 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.2761 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3240 | |
| 376 | L | A | -1.7612 | |
| 377 | D | A | -2.0407 | |
| 378 | P | A | -1.0677 | |
| 379 | G | A | -1.0244 | |
| 380 | V | A | -0.9373 | |
| 381 | L | A | -0.5467 | |
| 382 | A | A | -0.6648 | |
| 383 | H | A | -0.8512 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.4012 | |
| 386 | T | A | -0.5785 | |
| 387 | M | A | -0.3350 | |
| 388 | N | A | -0.8671 | |
| 389 | P | A | -1.2664 | |
| 390 | T | A | -1.5250 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.5239 | |
| 393 | E | A | -2.9124 | |
| 394 | N | A | -2.6375 | |
| 395 | W | A | -1.5143 | |
| 396 | N | A | -1.1981 | |
| 397 | L | A | -0.2456 | |
| 398 | G | A | 0.5273 | |
| 399 | F | A | 2.4197 | |
| 400 | V | A | 1.8431 | |
| 401 | P | A | 0.0559 | |
| 402 | P | A | -1.8646 | |
| 403 | K | A | -3.4131 | |
| 404 | E | A | -3.8680 | |
| 405 | R | A | -4.1531 | |
| 406 | E | A | -3.8651 | |
| 407 | D | A | -2.8982 | |
| 408 | P | A | -1.7792 | |
| 409 | Y | A | -0.9946 | |
| 410 | K | A | -2.0983 | |
| 411 | G | A | -0.6396 | |
| 412 | L | A | 0.6598 | |
| 413 | I | A | 1.5866 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.3691 | |
| 416 | E | A | -1.6078 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.8281 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -1.8966 | |
| 421 | E | A | -2.5092 | |
| 422 | R | A | -2.0093 | |
| 423 | F | A | -1.0266 | |
| 424 | S | A | -1.3183 | |
| 425 | Q | A | -1.7725 | |
| 426 | D | A | -2.8857 | |
| 427 | L | A | -1.9853 | |
| 428 | D | A | -2.7829 | |
| 429 | Q | A | -2.6073 | |
| 430 | F | A | -1.4307 | |
| 431 | A | A | -0.8870 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.5358 | |
| 435 | K | A | -0.7038 | |
| 436 | F | A | 0.1659 | |
| 437 | L | A | 1.0452 | |
| 438 | Y | A | 0.8376 | |
| 439 | Q | A | -0.2622 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine