Project name: Mb5-11_VFLLLL

Status: done

Started: 2026-07-06 06:35:51
Settings
Chain sequence(s) A: MQANSGSLEVVEASPTSLQVSWDAFHRYHNGFTHPVRYYRFTYGETGGNSPVQEFTVPGSKSTATLSGLKPGVDYTLTVYAVTWYPRYGYGESGPLSLNYRTELDKPSQ
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:49)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:50)
Show buried residues

Minimal score value
-2.7173
Maximal score value
1.2366
Average score
-0.74
Total score value
-80.6554

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 0.2697
2 Q A -0.9263
3 A A -0.7890
4 N A -1.5682
5 S A -1.1773
6 G A -1.3449
7 S A -1.1968
8 L A -0.9694
9 E A -1.7969
10 V A -0.5751
11 V A 0.1201
12 E A -1.3904
13 A A -1.1503
14 S A -1.4253
15 P A -1.7406
16 T A -1.1634
17 S A -1.1248
18 L A 0.0000
19 Q A -0.8517
20 V A 0.0000
21 S A -0.9719
22 W A 0.0000
23 D A -1.9594
24 A A -1.2771
25 F A 0.0000
26 H A -1.3196
27 R A -0.7051
28 Y A 0.3650
29 H A -0.1830
30 N A -0.7513
31 G A -0.0637
32 F A 1.2366
33 T A 0.3929
34 H A -0.0731
35 P A -0.5387
36 V A -1.0430
37 R A -1.4517
38 Y A -0.9240
39 Y A 0.0000
40 R A -0.8962
41 F A 0.0000
42 T A -0.6016
43 Y A 0.0000
44 G A -0.6007
45 E A -1.3692
46 T A -1.1398
47 G A -1.1660
48 G A -1.3103
49 N A -1.5117
50 S A -0.8426
51 P A -0.3069
52 V A 0.4670
53 Q A -0.8635
54 E A -1.6913
55 F A -0.7435
56 T A -0.3218
57 V A 0.0000
58 P A -1.0093
59 G A -1.2294
60 S A -1.1650
61 K A -1.4957
62 S A -1.0876
63 T A -0.7162
64 A A 0.0000
65 T A -0.4037
66 L A 0.0000
67 S A -0.7660
68 G A -1.0005
69 L A 0.0000
70 K A -2.4006
71 P A -1.9631
72 G A -1.1945
73 V A -1.1295
74 D A -2.0278
75 Y A 0.0000
76 T A -0.7909
77 L A 0.0000
78 T A -0.5344
79 V A 0.0000
80 Y A -0.3606
81 A A 0.0000
82 V A 0.0000
83 T A 0.0000
84 W A 0.5813
85 Y A 0.0000
86 P A -0.4359
87 R A -1.0951
88 Y A 0.7279
89 G A 0.7304
90 Y A 1.1303
91 G A 0.2767
92 E A -0.7701
93 S A 0.0000
94 G A -0.6355
95 P A -0.6439
96 L A 0.0000
97 S A -0.6302
98 L A -0.7220
99 N A -1.7138
100 Y A -1.4695
101 R A -2.4028
102 T A 0.0000
103 E A -1.9221
104 L A -1.0203
105 D A -2.5833
106 K A -2.7173
107 P A -1.7910
108 S A -1.6441
109 Q A -1.6645
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Laboratory of Theory of Biopolymers 2018